Carnobacterium viridans: LHA31_04705
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Entry
LHA31_04705 CDS
T08019
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cvd
Carnobacterium viridans
Pathway
cvd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LHA31_04705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvd02000
]
LHA31_04705
Transporters [BR:
cvd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LHA31_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
nSTAND3
AAA_29
DUF87
AAA_22
AAA_18
NB-ARC
AAA_16
AAA_23
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
UDE96033
LinkDB
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Position
949109..950857
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AA seq
582 aa
AA seq
DB search
MHLFFTFLKKNKLLVLATSSLILLQSVATLFIPYLIAQLIDKGILEKNTNVVSSIGIQML
LTILVGALVGVLGSYYTSEIASRFGKETRKKLFRKIQDLSLNDTNKIGVASLVTRTSSDV
VNIQEVTLSLFQMVLPSPFMAVISIVLAYRISPMMTVIPLISILIFIGVITAVMFKSTRL
INNIQKKMDKMTMLVRQFFKGVKIIRAFDNAEYEKNKVDGSFNDFAANMIRINKYFAFLT
PVAFSLNALTMIPIIWVGSSLVADNTIQVGSITAVIGYSVITMSSFIMTALIMFNIPRAI
ASLNRIQEVLTLQPEVEDDSQLNEKVDVTVQPALSFENVTFKYQGADKSVLEDMDFSINT
GEVLAIVGGTGSGKSTIAKILLRFNDIQKGRILIHGTDISKLSQKDLRSLISYVPQRAFL
FSGTIQDNILDGNKEATVNELRHAAQVAQALPFIEEQDQQFNALVAQGGTNFSGGQKQRL
AIARALIKKSQIYVFDDSFSALDYKTDAKLRAALKPELKDAVTLIIAQRISTIIDADQII
VLNEGKIVGKGTHSELIEKNPVYQELAKSQNMLSKSEVKENV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcatttattttttacatttttaaagaaaaacaaactgcttgtccttgctacaagtagc
ttaattttacttcaatccgtagcaactctattcatcccttatctaattgctcaactcatt
gataaaggtattttagaaaaaaataccaacgtcgtttcttctattggaattcagatgttg
cttactattcttgtaggtgctcttgttggggtgcttggaagttactacacttctgaaatt
gcttcacgttttggaaaagaaacccgtaaaaagttatttagaaaaatacaagatttgtca
ctaaatgacactaataaaattggtgtggcctctttagtcacgagaacgtctagtgatgtt
gtcaatattcaagaagtaactttatctctctttcaaatggttttaccgagtccatttatg
gcagtcatttctattgtattagcttatcggatttcccctatgatgacggtcattccactt
atatccattcttatttttatcggtgtgattactgccgtaatgtttaaatccactcgcttg
atcaataacattcagaaaaagatggataaaatgacaatgcttgttagacaattttttaaa
ggcgtaaaaattattcgtgcatttgataacgctgaatatgaaaaaaataaagttgatggt
agttttaatgattttgctgctaacatgattcggatcaataagtactttgcctttctaaca
cctgttgcttttagcctgaacgcccttacgatgatccctattatttgggtggggagttcc
ttagttgcagacaacaccattcaagtaggttccattactgccgttatcgggtactcagtc
atcacaatgtcttcatttatcatgaccgctttgattatgtttaacatacctagagcaatc
gcatcattaaatagaattcaagaagtactgacacttcagccagaagtggaagatgatagt
cagttaaacgaaaaagtagatgttactgtgcagcctgctttgtcatttgaaaacgtaacg
tttaaatatcaaggtgctgacaaatcagtcctagaagacatggatttttcaatcaacaca
ggtgaagtattggctatcgttggtggaacgggatccggtaaaagtacgattgctaaaatc
cttttacggttcaatgacattcaaaagggtcgcattttgatacacggtacagatatcagc
aaactttctcaaaaggaccttcgttcattgatcagctacgtcccacaaagagcattttta
tttagtggaaccatccaggataatattttagatgggaataaagaagctacggttaatgaa
ttgagacatgcagctcaggttgctcaggccttaccgtttatagaagaacaggatcagcaa
tttaatgccttggtagctcaagggggaaccaatttttctggaggacaaaaacaacgtttg
gcaatcgcacgtgcactgataaagaaatctcagatttatgtatttgacgatagtttttca
gcactggattataaaacagatgcgaaactaagagccgctttaaaaccagaattgaaagac
gcggtaacgttaatcattgcccaaagaatcagcacgatcattgatgctgatcaaatcatc
gtcttaaacgaagggaaaattgtgggtaaaggaacccattcagaattaattgaaaaaaat
cctgtttatcaagaattagctaaatctcaaaatatgctgtctaaaagcgaggtgaaagaa
aatgtctaa
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