Carnobacterium viridans: LHA31_05940
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Entry
LHA31_05940 CDS
T08019
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
cvd
Carnobacterium viridans
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cvd03110
]
LHA31_05940
Chaperones and folding catalysts [BR:
cvd03110
]
Heat shock proteins
HSP100
LHA31_05940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
Sigma54_activat
AAA_16
AAA_22
nSTAND3
AAA_18
IstB_IS21
AAA_14
RuvB_N
AAA_7
RNA_helicase
Mg_chelatase
TniB
Zeta_toxin
ATPase_2
NACHT
AAA_28
ResIII
AAA_24
UVR
AAA_3
Torsin
DNA_pol3_delta2
AAA_23
NADH-UOR_E
SLFN-g3_helicase
COG4_N
Motif
Other DBs
NCBI-ProteinID:
UDE96230
LinkDB
All DBs
Position
complement(1197347..1199839)
Genome browser
AA seq
830 aa
AA seq
DB search
MDELFSEKARMVLIMAQEEAKGFRHHSVGTEHILLGLIMEQNGIAGKTLRQFSVTEMDIR
EEIEHFTGYGTMKYLSKNAILPYSPRAKQAITFATDEARRMGSDLVGTEHLLLGLLREED
ILSSKILNNLDINLNKARQIVLKKIGLSDVTNGKGRKAKPTAKQVAGTPTLDSLARDLTA
VAREGKLDPVVGRHKEIQRIIQVLSRRTKNNPVLVGEPGVGKTAIAEGLAQKIIDGEVPA
ALANKRLMMLDMGSLVAGTKYRGEFEERMKKVIDEIYQDGEVVLFIDELHTLIGAGGAEG
AIDASNILKPALARGELQTIGATTLDEYQKYIEKDAALERRFAPIHVDAPSEEEAEEILL
GLRSRYEEHHGVEITDEAVHAAVKYSSRYITSRQLPDKAIDLIDESASKVRLDVSSKPSP
VAAAVTDLEALIQEKEEAIQLQDFEKAAKIRSKEMKQRKKIESFIQKQEGKAASNSLQVT
ERDIAEVVALWTGIPIHQMEQKESDRLMNLEKVLHKRVIGQEQAVGSVSRAIRRSRSGLK
DPNRPIGSFMFLGPTGVGKTELAKALAEAMFGNEEALVRVDMSEFMEKYSTSRLIGSPPG
YVGYDEGGQLTEKIRQKPYSVILFDEVEKAHPDVFNILLQVLDDGHLTDAKGRKVDFKNT
VMIMTSNLGATALRDEKAVGFGTASNKKDHSAMEKRIMEELKKTFKPEFINRIDDSIVFH
SLEKEDLTQIVKLMAHTIIKRLKDMDIEVKITQAAIDVIAKAGYDPEYGARPIRRALQKE
VEDRLSEELLSGRVKIGDQVTIGASKGTIRITVKDPKKANEKLLATSENV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattattttctgaaaaagcaagaatggttttaatcatggcgcaagaagaagca
aaaggatttcgtcaccattctgtaggaactgagcacattcttttaggattgattatggag
caaaatggtatcgcaggaaaaacgttgagacaattttctgttactgaaatggatattcgt
gaagaaattgaacactttactggttatggaacgatgaagtatctttctaaaaatgcgatt
cttccttattcgccaagagccaaacaagctattacgtttgcaacagatgaagcaaggcgt
atgggctcagaccttgttggcacagaacatttattgttaggattattgcgtgaagaagat
attttatcctctaagattttaaacaacttagacattaatctaaataaagctcgtcaaatc
gtattgaaaaaaatcggtttgagtgatgtaacaaatggtaaaggaagaaaagccaagcca
actgctaaacaagtcgccggtacacctactttggactcactagctcgtgatctaacagca
gtcgcaagagaagggaagctggatccagttgttggtcgtcacaaggaaatccaacgtatt
atccaagttttaagccgccgaacaaaaaacaatcctgttttagttggggaaccgggtgtt
ggtaaaacagcgattgcagaaggtttagcgcaaaagattattgatggagaagttcccgct
gcattagccaataagcggttaatgatgttagatatgggttcattggtagcaggcacaaaa
tatcgtggtgagtttgaagaacgaatgaaaaaagtgattgatgagatttatcaagatggc
gaagttgtcttatttatagatgagttgcatactttaattggtgctggtggagcagaaggt
gcaatcgatgcatctaatattttgaaacctgcattagctcgtggcgagttgcaaacgatt
ggggcaacaactttagatgaataccaaaagtatattgaaaaagatgcagctctagaaaga
cggtttgcacccattcatgtggatgctccttcagaagaagaagctgaagagatattgtta
ggcttacgttctcgttatgaagaacatcatggcgttgaaattacagatgaggcagtacat
gctgctgttaagtactcatcgcgttatattacatcaagacaactaccagataaagccatt
gatttgatagatgaatcagcttcgaaagtacgattagatgtatcgagtaaaccttcgcca
gttgcagctgcagttacagatttagaagctttaatacaagaaaaagaagaagctattcaa
ttacaagattttgaaaaagcagcaaaaattcgttcaaaagaaatgaagcagcgtaaaaag
attgaaagtttcattcaaaaacaagaaggaaaagctgcttcaaattctttacaagtaacg
gaaagagatattgcggaagttgtcgctttatggacaggtattccaattcatcaaatggaa
caaaaagaatcagaccgtttgatgaatttagaaaaagtgttgcataaacgtgtaattgga
caagagcaagctgtgggttcagtttctagagcgattagacgatctagaagtggtttgaaa
gatccaaaccgtcctattgggtcatttatgttcttaggacctacaggtgtcggtaaaaca
gaattggctaaggcacttgcggaagctatgtttggaaatgaagaagctctagttcgagta
gatatgtctgagtttatggaaaaatatagtacgagtcgtttaattggttcacctcccgga
tatgtaggttatgatgaaggtggtcaattaactgagaaaattcgtcaaaaaccttattcc
gttattctatttgatgaagttgaaaaagctcatccggatgtatttaatattctattacaa
gtcttggatgatggtcatttaacagatgctaaaggacgaaaagttgatttcaaaaatacg
gtaatgattatgacatctaatttaggcgcaacagcattaagagatgaaaaagctgttggg
tttggtacagcaagcaataaaaaagaccattcagctatggaaaaacgaatcatggaagaa
ttgaaaaaaacgtttaaacctgagtttatcaatcggattgatgattcgattgttttccat
tctctagaaaaagaagatttaactcaaattgttaaattaatggcacataccattattaaa
cgattgaaagatatggatattgaagtcaaaatcactcaagcggctattgatgtgattgct
aaagctgggtatgatcctgagtatggagcacgtccaattcgtcgtgcacttcagaaagaa
gtagaagatcgattgagtgaagagttattgagcggccgagttaaaattggtgatcaagtc
acaataggtgcttcaaaaggaacgattcggattacagtaaaagatccaaaaaaagcaaac
gaaaaattgttggctaccagtgagaacgtataa
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