Carnobacterium viridans: LHA31_06200
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Entry
LHA31_06200 CDS
T08019
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
cvd
Carnobacterium viridans
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LHA31_06200 (rnmV)
Enzymes [BR:
cvd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
LHA31_06200 (rnmV)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
PfkB
Motif
Other DBs
NCBI-ProteinID:
UDE94224
LinkDB
All DBs
Position
complement(1250759..1251325)
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AA seq
188 aa
AA seq
DB search
MEKIKEIIVVEGRDDTRRILESVEADTIETNGSAIDEETLKLIRKAHETRGVIVFTDPDF
PGEKIRKIISQAVPGVKHAFLTKDEARAKGKGSLGIEHASPEAIRTALSKCYTETIAKES
LISQELLMDAGLIMGPFARKRRTKLGEKLNIGYTNGKQLQKRLQMFQISPEEVVTVMQQI
LEEENDNT
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaataaaagaaattatagttgttgagggccgcgatgatacaagacgtattttg
gaatcggttgaagcagacacgattgaaacgaatggttcagctattgacgaagaaacgttg
aaattaataagaaaagcccacgaaacaagaggtgttattgtttttacagatcctgacttt
ccgggtgaaaaaatccggaaaatcatttcgcaagctgttcccggagtgaaacacgctttt
ttgacaaaagatgaggctagagcaaagggtaagggcagcttaggtattgaacatgcttca
cctgaagcgatacgcacagcactatcaaagtgttacaccgaaaccatagctaaagagtcg
ctcatctcacaagaattgttaatggatgctggcttgattatggggccttttgctcgaaag
agacgaacaaaactgggtgaaaaacttaatattggttacactaatggaaaacaacttcaa
aagagattgcaaatgtttcaaatctcacctgaagaagttgtaacagtgatgcaacaaatt
ttggaggaagaaaatgacaacacgtaa
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