Carnobacterium viridans: LHA31_06825
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Entry
LHA31_06825 CDS
T08019
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
cvd
Carnobacterium viridans
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvd03000
]
LHA31_06825 (treR)
Transcription factors [BR:
cvd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
LHA31_06825 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_11
HTH_41
HTH_36
TrmB
HTH_Crp_2
DnaD_N
SAMD1_WH
Rrf2
MCM5_C
Motif
Other DBs
NCBI-ProteinID:
UDE94333
LinkDB
All DBs
Position
complement(1384160..1384876)
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AA seq
238 aa
AA seq
DB search
MSKFNEIFLDLEAAILNQRFISGDLLPSENELVKTYNVSRETIRKALNLLLEKGYIQKIQ
GKGSIVLDIKRFDFPVSGLTSYKELQDAQNMNSQTIVVSNGLLPVSEELANHLKLSVGTP
VLYLERLRKVHGEVVIIDKDYLVTSIVPSIPNEAAEDSLYHYIEQTLGLSIGYAQKEITV
DPITEEDKRLMDLQEDTHVVVVRSDVYLEDTTLFQHTESRHRLDRFRFVDFARRRNSL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtttaatgaaatttttttagatctcgaagcagcgattttaaatcaacgattt
atttcaggtgatcttttacctagtgaaaatgaattagtcaaaacctacaatgtttcccgt
gaaacaattcgaaaggccctaaatttacttttagaaaaaggatatatacaaaaaatacaa
ggcaaaggttctattgttttagatattaagcgctttgatttccctgtatcaggattgaca
agttataaagaactccaagatgctcaaaatatgaatagtcaaacaattgtggtatccaat
ggcttgctacctgtttcagaagagttagcgaatcacttaaaactttctgtaggtactcca
gttttgtatcttgaacgattaagaaaagtacatggagaagtggttattattgataaggat
tatttagtcacttctattgttccaagtatcccgaatgaagctgctgaagactctttgtac
cattatattgaacaaacattgggtctatctatcggttacgctcaaaaagaaataacggta
gatcctattactgaagaggataaacgattgatggatttacaagaagatacccatgttgtg
gttgtgcgaagtgatgtctatttagaagatacaaccctatttcaacataccgaatcacgt
catcgtttggatcgctttcgattcgtcgattttgctagacgtcgaaattctttataa
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