Carnobacterium viridans: LHA31_06970
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Entry
LHA31_06970 CDS
T08019
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cvd
Carnobacterium viridans
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvd03400
]
LHA31_06970 (radA)
DNA repair and recombination proteins [BR:
cvd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LHA31_06970 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
Lon_C
Rad51
RecA_N
AAA
AAA_22
AAA_16
ABC_tran
nSTAND_NTPase5
AAA_24
AAA_14
AAA_5
NTPase_1
nSTAND3
SLFN-g3_helicase
AAA_30
divDNAB
ATPase_2
DZR
MCM
AAA_18
CbiA
MeaB
RsgA_GTPase
DUF2642
NACHT
zf-RING_10
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UDE94356
LinkDB
All DBs
Position
1416894..1418264
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AA seq
456 aa
AA seq
DB search
MAKKKITKFVCQACGYESPKWMGRCPNCSSWNQMEEEVVADKNDRRSRVSMTGKTAKAEA
IQDITVSKVPRVKTKLKELNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSAQLNLAGGK
VLYVSGEESSSQIKMRANRLGVKGADFYIYPETDMGAIRQTIEDLKPDYVIIDSIQTMNQ
SDINGAIGSVSQVRESTADLLKIAKTNNIAIFIVGHVTKEGSIAGPRMLEHMVDTVLYFE
GERHQTFRILRAVKNRFGSTNEIGIFEMREGGLVEVLNPSEMFLEERLSGATGSAVVASM
EGSRPILAEIQSLITPTAFGNARRTASGLDYNRVSLIMAVLEKRAGLMLQNQDAYLKSAG
GVKLDEPAIDLAIAISVASSYQEKETKETDCFIGEIGLTGEIRRVSRIEQRVNEAAKLGF
KRIMIPKNNIGGWTFPENIEVIGVMTLAEAIKKAFS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaagaaaattactaaatttgtctgccaagcatgtgggtatgaatcgccaaag
tggatgggacgttgtccaaactgtagtagttggaatcaaatggaagaagaagtagtagcg
gataaaaatgatcgtagaagtcgtgtcagtatgactggcaaaaccgctaaagctgaagcc
attcaagacatcacagtatctaaagttcctagagtgaaaacaaagctaaaagaactaaat
cgcgttttaggaggcggagtagtaccaggctcattggttttgattggtggagatcctggt
attggaaaatcaacacttttactgcaagtttcagcacagttgaatttagcaggcggaaaa
gtattatatgtaagtggtgaggaaagttcgagccaaattaaaatgcgtgcgaaccgttta
ggtgtaaagggagcagatttttatatttaccctgaaacggatatgggtgcaataagacaa
acaattgaggacttaaagcctgattatgttattattgattctattcaaaccatgaaccaa
tccgatattaacggagcaataggaagcgtttctcaagtcagagaaagtacagctgattta
ttgaaaattgcaaaaacaaataatattgctatctttattgtaggtcatgttacaaaagaa
gggtctattgctggtccacggatgttggagcacatggtagacacggtgttgtattttgaa
ggagaaagacatcagactttccgtattttaagagcggttaaaaatcgatttggctcaacg
aatgaaattgggattttcgaaatgcgtgaaggcggattggtagaagtactgaatccttcg
gaaatgtttcttgaagaacgcttatctggagcgacaggttctgcggtagtggcttcaatg
gaaggttcacgtcccattttagctgaaattcaatcgttgatcacaccgactgcttttggt
aatgctcggcggacagctagtgggttagattacaatcgtgtgtctttaattatggctgtt
ctagagaagagagcagggctgatgctgcaaaaccaagatgcctatttaaaatcagcaggc
ggcgttaaattggatgaaccagcaatcgacttagctattgccattagtgtggcatccagt
tatcaagaaaaagaaacaaaagaaaccgattgttttattggcgaaattgggttgactgga
gaaatcagacgagtcagccggattgaacagcgggtcaatgaagctgctaaattagggttt
aaacgaatcatgattcccaaaaataatattggtggttggactttccctgaaaatatagag
gttatcggtgttatgacgttagctgaagctataaagaaagctttttcttaa
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