Carnobacterium viridans: LHA31_09615
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Entry
LHA31_09615 CDS
T08019
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cvd
Carnobacterium viridans
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvd03400
]
LHA31_09615
DNA repair and recombination proteins [BR:
cvd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LHA31_09615
Archaeal homologous recombinant proteins
LHA31_09615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
UDE94811
LinkDB
All DBs
Position
1934117..1935247
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AA seq
376 aa
AA seq
DB search
MRLLHTADWHIGKIVNEMSMLEDQEYFLDQLIEKLKTIQVDALIMAGDLYDRAMPSKEAV
ALANKVLTRLIQEVDLPVLIIAGNHDSNERVEYGADLLATNQLYIEGTVKEVTRKVTLKG
VNFYLLPFADYAYIRELLQDESIKSLEDATRVQLEAIKKEMDLSEINVLIAHGYVINLTN
DTSETTDSERPLSIGTAEYVSVELFEDFDYVALGHLHKAQKVKHDRIRYSGSILKYSKSE
AVHKKQVSLVTLEKNHVEIEPIYIEPKRDMRIIKGFFAALMEQHSDDYVFFELLDENFVM
DAMNQLRRRYPNAMGLEYAARKEREENASIMHQEHLKKLSVQDIFDDFYAHYKEKELTVE
HKSIINNILHEMESGE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcgattattacatacagcagactggcacattgggaaaattgtcaatgaaatgtcgatg
ttagaagaccaagaatattttcttgatcaattaattgaaaaattaaaaacaatacaggtt
gacgctttaatcatggcgggagatctatatgaccgtgcgatgccatcaaaagaagcagta
gccttagcgaataaagtcttaacaagactgatacaagaagttgatcttccagttttgatc
atagcaggcaaccatgatagtaatgaacgagtagaatatggtgcagaccttttagcaacc
aatcagctctacattgaaggaaccgtcaaagaagtgacaagaaaagtaactcttaaaggt
gttaatttttatttgttgccttttgcagattatgcttatataagagagttgttgcaagac
gagtcaatcaaaagtctagaagatgccacaagggttcaactagaagctatcaaaaaagaa
atggacctttcagagatcaatgttttgatcgcacatggatacgtcattaatttaaccaat
gatacttctgaaacaacagattcagaacgacctttaagtattggaacggctgaatacgta
agtgtagagctatttgaagattttgattatgtagcgttgggccatttgcataaggctcaa
aaagtaaagcatgatcgtatccgttacagcggatcgatattaaagtattcgaaatcagaa
gcagtgcacaaaaaacaagtatctctagtgacgttagaaaaaaatcatgttgagattgaa
ccaatttatattgaacctaaacgagatatgcgtatcataaaaggtttttttgctgcatta
atggaacaacattcagacgattatgtgttttttgaattactggatgaaaatttcgttatg
gatgcaatgaatcaactgcgccgtcgttatccaaatgcgatgggcttggagtatgcggct
cgaaaagaacgcgaagaaaatgcatcaattatgcatcaagaacacttgaaaaaattatca
gtccaagatatttttgatgatttttatgcccattacaaagaaaaagagttaactgtcgaa
cacaaaagtatcattaacaatattttgcatgaaatggagagtggggagtaa
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