KEGG   Cebidichthys violaceus (monkeyface prickleback): 137866473
Entry
137866473         CDS       T10484                                 
Symbol
polr2eb
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cve  Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03020  RNA polymerase
cve03420  Nucleotide excision repair
cve04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:cve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    137866473 (polr2eb)
  09124 Replication and repair
   03420 Nucleotide excision repair
    137866473 (polr2eb)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    137866473 (polr2eb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cve03021]
    137866473 (polr2eb)
   03400 DNA repair and recombination proteins [BR:cve03400]
    137866473 (polr2eb)
Transcription machinery [BR:cve03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     137866473 (polr2eb)
  RNA polymerase III system
   RNA polymerase III
     137866473 (polr2eb)
  RNA polymerase I system
   RNA polymerase I
     137866473 (polr2eb)
DNA repair and recombination proteins [BR:cve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      137866473 (polr2eb)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NYD-SP12_N DUF7890
Other DBs
NCBI-GeneID: 137866473
NCBI-ProteinID: XP_068558508
LinkDB
Position
Unknown
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVVELLARYKLKESQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaagaggagacttacaggctatggaagattcgtaaaaccatcatgcagctg
tgccatgacagaggctacctggtgacgcaggacgagttggaccagacgctggatgagttc
aagagtcagtttggagacaagcccagcgagggtcgccccagacgcacagacctcacagtg
ctggtggcgcacaacgacgaccccaccgaccagatgtttgttttctttcctgaggagccc
aaggtgggaatcaagacgatcaagatgtactgtcagaggatgcaggaggagaacatcaca
cgggccatcattgttgttcagatgggcatgacgccgtcggccaagcagtctctcgttgac
atggcacccaaatacatattggaacagtttctacaacaggagctgctcatcaacatcaca
gagcacgagcttgttccagagcacatcgttatgacaaaagaggaagtggttgaacttctg
gcaagatataaattaaaggaaagtcagttgccgaggattcaggctggggaccccgtggct
cgctactttggcttgaaaagaggacaggtggtaaagatcatcagacccagtgaaacagct
gggaggtacatcacatacagactggtgcagtga

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