Cebidichthys violaceus (monkeyface prickleback): 137866872
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Entry
137866872 CDS
T10484
Symbol
skic3
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137866872 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cve03019
]
137866872 (skic3)
Messenger RNA biogenesis [BR:
cve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
137866872 (skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_16
TPR_8
TPR_11
TPR_17
TPR_12
TPR_9
TPR_CcmH_CycH
ANAPC3
ANAPC8
TPR_BSK1_C
ARM_TT21_C
Hemopexin
Motif
Other DBs
NCBI-GeneID:
137866872
NCBI-ProteinID:
XP_068559171
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSNKEVKAALKSAREAIKNKEFKDALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQAQ
TAYKKAVELEPEMLLAWQGLANLYEKTDQWDFKIELPNIYQKLVELYASCDKNKCYEMIG
KLSDIYQSDKEYLKLAKVWLQLIQVKEEEAVDKKELLQLWQQMTQLLSDCPNEEERDNET
QQHLITAFEKAMVLMDPVPGEQHKKVSADYVKCLSKLPKEEPKMIEACESMLSLYPNQSY
PLEVLCSHYLKTGVQNEDAVSCFSRLLDLAPDSGLGHLGLGTKALQEGRFKDAIKDLTQG
LKRMGSSTGWCSLAEAQFKMQRYSDCAMSCSQGLTVCVSGDKELRVKLLKMKLEALVRSG
GDTAADQALETFSQIPGAEKDPVLVALKGRAYLNKGDVDEALKVSSELVVSNPNLAQGFV
LRGLAQLAQGQQQLAEESFLKAASQSPDCGEYYFLLGRLYWAMGEETRKDKSKVHTHLLK
AAKLDPHLGCVFRYLGHYYRQVANDHGRSRGCYKKAFKMDNDDAESGAASVDLSMEQDDM
DTALAILQSVIEKATPGSAKWAWMRRGLYYLKIGENQQAVADLQAALRADPEDWVCWECL
GEAYLNCRSFTAALKAFGKAHQLQPASIYSVYQAAAIKQTLGKFKEAVAEFLQITEKQDY
VPALKGLGECQLSLAKSLMEDCRDGGAIDLIQQAIQNLFRAVEMRPDLSCLWKLLGDACT
AVCTVSTNGAQVLVPAPLAGLDPNTQSHALTQAQTLKVGERCYGRALKLMSEVPSLWNDL
GLNYYHQSSLSCSTEDDKNAPSLLLEKAQQCLKKAIMMDSGTHSYWNALGVISMSKGLEN
FALAQHCFIKSIQVEPNNVVAWTNLGTLYLKNDNIKLAHKAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAQVALSKYTERIQSDPDAFIMLGFLNEHLQLKRQALAAYKRAVELLKFMSSTEELAFA
LGSYGRALCTSGQSEEAVRVYNSTPLQELSDLAGLALAYCRAGLIPESINTYERASTVAS
TEKEKAYILTALALLQHRQGNLDSAKTLLFKCSMLKEPISESLLCLCALGLVHSDATLAA
AALTELLKQGSASVSVIEQRCLLTCALLALQGNYSAVQREASRAVHSNPGNPSLWALLSR
LVPQYYPKKANGGAMAGHVAGLSGMTQGKRALLYSGVNQLASGRHSGEDSHRNALKTMQR
AVMLCPDDPATWAGLMAACHTENTSCYLSGSAPSRRGLEQTLMSVVSEKVHNVEEIERPL
AQALEGWVLKQAVTALMLGGQLEQAEALCSQVLNVSPEHPAVMLSLRQVQCQRLLLAGGG
TVLPDSVLEQLHNTVLMNPTNPGAWHWLAEVFRSQGLLVQAVMAYRQSLQLASQLGLHSS
QVASLLRLALLALGNCMAGVPGNEWRDMIVEATTEVLKLGSSPMALLFQALLQYGTKMAA
RETRRLLERLAYSPDVPVTMVHVSSWYLLRHLHAKNDQDLMNVLLQHAKMNGDKRLLEFH
SLLASSSS
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagtgaaagcagcactgaaaagtgccagagaggccataaaaaacaaa
gagttcaaagacgctctgaaacactgcaaggctgttttgaaacttgagaagaacaattat
aatgcatgggtattcatcggcttggcagccagcgaactggagcaaccagatcaggcacag
accgcctataaaaaggccgtggagctggagcccgagatgctgctggcatggcagggtttg
gcaaatctttatgagaagacagatcagtgggattttaaaattgagctacccaacatttac
cagaagctcgttgagctgtatgcaagctgtgacaaaaataaatgttacgagatgatcggt
aagctgtcggatatctatcaatctgacaaagaatatttaaagttggcaaaggtttggctg
cagctcattcaggtgaaggaagaagaggctgtggacaagaaagagttactgcagctgtgg
caacagatgacccaactcctctcagactgccccaatgaggaagagcgggacaatgaaact
caacagcatttaatcacagcattcgagaaggccatggttctcatggaccctgtaccagga
gagcaacacaagaaggtctcagctgattatgtcaaatgtctctctaaactgcccaaagaa
gaacccaaaatgatagaggcatgtgagtccatgctgtccctctaccctaaccaaagttat
cctcttgaagtcctttgttctcactacctcaaaacaggtgttcagaatgaggacgcagtc
agctgtttctcccgcctccttgatctggctcctgacagtggactaggtcacttgggtctg
ggcaccaaagcactgcaggaagggaggtttaaagatgccattaaggaccttacacaaggt
ctgaagagaatgggctccagtacaggatggtgcagtctggctgaagctcagtttaaaatg
cagagatactcagactgtgctatgtcatgctcccaaggtctgaccgtgtgtgtttccgga
gacaaggagctgagggttaaactgctgaagatgaagcttgaggctttagtcaggagtggg
ggagacacggctgcagaccaggctttggagacattctcacagatcccaggtgctgaaaaa
gacccagttctagtcgcccttaaaggacgagcataccttaacaagggagacgttgatgaa
gcacttaaggtgtcatcagagctggtggtctctaaccctaatctggcccaggggtttgta
ctgagaggactggcgcagttggctcagggccagcagcagctggcagaggagagtttccta
aaggcggctagccagagcccagactgtggagagtattatttcttgctgggacgactctac
tgggccatgggagaagagacccgaaaagataaaagcaaagtccatacgcatttgcttaag
gctgcaaagttagacccacaccttggttgtgtattccgctaccttgggcattactaccgc
caggtggcaaatgatcacggccgctcacgaggatgctataagaaggcctttaagatggac
aacgatgatgctgagtctggagcggcctccgtggatctcagtatggagcaggatgacatg
gacactgctttagcaatacttcagtcagtgattgagaaagccactccgggctcagctaaa
tgggcttggatgaggcgggggctgtactacctaaagatcggagagaatcaacaagctgta
gctgatctgcaggcagctctgagagcagatccagaggactgggtgtgttgggagtgttta
ggtgaggcctacttaaactgccggagtttcacagccgccctgaaggcctttggtaaggcc
catcagcttcaacccgcctccatctacagtgtctaccaggctgctgctatcaaacagacc
ctgggcaagttcaaagaggctgttgcagagttcttgcagatcacagagaagcaggactat
gtgcctgcccttaaaggtcttggggagtgccagctgtctctggcaaaaagtttaatggaa
gactgcagagatgggggagccattgacctcattcagcaagccatacagaacctcttcaga
gctgtggagatgcgtccagacctgtcctgtttgtggaagctgctgggagacgcttgcacc
gcggtctgcaccgtgtccacaaacggtgctcaagttttagtgccagccccactggctggt
ttagaccccaacacccagagtcacgcactgacccaggcccagacactcaaagttggtgag
aggtgttatggccgtgctttgaagttgatgtctgaggttcccagcctttggaatgaccta
ggactcaactattaccatcagtccagcctatcctgctcaacagaggatgacaagaatgct
ccatcgctgcttctggagaaggcccagcagtgtttaaaaaaagctatcatgatggacagt
gggacccatagctactggaatgccctgggagtgatttccatgagcaaaggtcttgagaac
ttcgctctggctcaacattgcttcatcaagtccatacaagttgaaccaaataatgttgtt
gcttggaccaaccttggtaccctgtatttgaagaacgacaatatcaagcttgcacacaag
gccttcaagattgcccagtcgctggagccgctctatgtcaactgctggattggacaggcg
ctgatagcagagagagtgggaagctatgacaccatggatcttttcaggcacaccactgaa
ctcagcacacatatggagggagtgaaaggttatgcctactgggtgtgttccaccctgctg
gataagagcaacagagactctgaactttaccgctacaacatagtccagatgaatgccatc
tctgctgctcaggtggcactcagcaagtacacagagaggatccagtctgaccctgatgcc
ttcattatgctcggtttcctgaatgagcatctgcagctgaagaggcaggccttagcggct
tacaaaagagccgttgaactgcttaagttcatgtcctcgaccgaagagctggcctttgct
ctgggcagctatggacgtgctttgtgcacctcgggtcagtcagaggaggcggtgcgtgtt
tataattccactccactgcaggagctcagtgatctggctgggctggctcttgcctactgc
agggcaggactcatcccagagagcatcaacacctatgaacgtgcttcgactgtggcttcc
actgagaaggagaaggcttacatcttgacagctctggctctgcttcagcaccggcagggt
aacctagactcagccaagactctgctgtttaaatgctcgatgttaaaggagccaatctca
gagtctctgctgtgtttgtgtgccctggggttagtccacagtgatgcgacactagctgct
gctgccctgactgagttgctaaagcaaggttcagcctctgtgagtgttatagagcagcga
tgtctcctcacctgcgccttgctcgccctgcagggcaactacagcgcggtgcaaagagag
gcttccagagctgtacacagcaatcctggaaacccatctctctgggccctgctgtccagg
ctggtaccacaatactaccccaagaaggctaatggcggcgcgatggctggtcatgttgcc
ggtctctccggtatgacccaaggaaagagggcattgttgtacagtggagtgaaccagctg
gctagtgggagacattctggagaggacagtcacaggaatgcactgaagactatgcagaga
gctgtgatgctctgtcctgatgatccagcaacatgggcaggattaatggctgcctgtcac
acagaaaatacttcctgttatctttcaggttctgctcctagcagacgaggactggagcaa
acactcatgtcagtggtttctgagaaagtgcataacgtggaggagatagagcgcccccta
gcccaggctctagaaggctgggtactaaaacaggcggtgactgctctcatgttgggtggc
cagctggagcaggctgaagccctctgctcacaggtgctcaatgtttctccagagcacccg
gcagtgatgctgtcactgagacaggtgcagtgtcagcgcctcctactggccggtggtggt
actgtgctcccagactctgtgctggagcaactccacaacacggtgttgatgaaccccacc
aaccctggggcgtggcattggctggctgaggtgtttcgtagccagggtttgctggttcag
gccgtcatggcttacaggcagagtctgcagctagcctcacagctcggcctgcacagcagc
caggtggccagcctgctccggctagcactgctagctctaggaaactgtatggcgggtgtc
ccaggaaatgagtggagggacatgatagtagaagccaccactgaagtcttgaagctgggt
tcatctcctatggccctcctcttccaggccctgctccaatacgggaccaagatggctgcc
agggagacgaggcgtttgttggagaggctggcttactctccagacgtccccgtgacaatg
gtgcatgtgtccagctggtacctcctcagacacctgcatgccaaaaatgaccaggaccta
atgaatgtccttttgcagcatgccaaaatgaatggtgataaaagactgctggagtttcat
tcactgcttgcctcttcttcatcctga
DBGET
integrated database retrieval system
