Cebidichthys violaceus (monkeyface prickleback): 137866941
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Entry
137866941 CDS
T10484
Symbol
vps13a
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
Membrane trafficking [BR:
cve04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
137866941 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137866941
NCBI-ProteinID:
XP_068559344
LinkDB
All DBs
Position
Unknown
AA seq
3272 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGDAVLRNLEIKENALSQLDIPFKVRAG
HIGQLQLKIPWKNLYTQSVEATLDGVYLLIVPTASIKYDAAKEEKQLQEARQRELQRIEE
TKLKAAEKEDPNLEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDVTNPNCPLSFGVSLK
NLSLQTSDENWNPRLLDENSRLFFKLVQLDNLFAYWNVNSLLFSNHSPDEALRCLQSSVD
IHNSLSVSHDFIFRPISAGAKLRMNPRSDVDFSSPKVDLMVNLSVVTIELNRPQYISILE
LLGSVDMMSRNLPYRKYRPMVHVNKNARIWWRYVITGILEVDVKPHLHMWSWQRIRSHRQ
MVKCYRELYKTKITNKKPSEELLKELEEPEKTLDIFNITLARQQAEVEASKAGLRIYRPG
LKMEEEESQGWLGWMWSWGGEADTKTKEVKTGGFDELLTTAEKAKLYTAIGYSDTVANPN
LPKDFEDMKVNFHMERLTVAIKDNKDKNEIIRLTVGELKSTLTQRPGAQAIKVTAQLSLF
EVTGLASERPAPTLLSSRKAATGAGTPLLCILFETNPLDESANQRLHVESQPLEIIYDAI
TVNSMSAFFMPPDDLQLDELTNATLMKLEQFRDRTATGLMYVIETQKVLDLKVNLMASYV
IIPQTGFFDGTQNILLLDLGHFKMSSQSKKHLPQLSAYSSNIEDIMSRAYDSFDIQLSSL
QFLYSKPDGDWKMARKQRRSPLHILEPVDLKVVFSRAMVIKDSRMAKYKMSGELPLLSLR
ISDVKLRNVQQLVESIPLPESRPTAHSGASSSTTKPKQSFTPQLTPRRPLNLADQRSSLM
FESCETISVTSLGSAEDLFYDAPSSPIGDRPFFPDNPMPLSYKRKGSEAQKNMTEFTMKF
EISELSVQLCRLSGDQEVTVLHLDIEGLGTELKLHTFDMTSYTYLKEICLKCPEYMDSEE
KQVQLITTLDNTEVDLLTLEYIKADKTGPEFKSQHNNTEQSIKVAVSSLDVHLHTEALLN
AMNFLNNLLPPSTKKEGRQEELPIIPEEEEAEAEREGEKKEEATVTRKKSTKNSKFANVV
NLHIRADLRCLKVFIRGQKTRISEISIEGLVSEVLMRKKEMEVLANLKNIVILDCDKDAL
YKKAVSIADKEVFDFHMVNYTDATEGDAYLDMSKVDTSVTLTVGCIQVIFLNKFVSSILT
FVNNFQEAKEALAEVTVQAAEKAASGVKELAERSTRIALNVDFNAPIIFLPQSSSSSNVI
VADLGLLSVKNSFAKQPFKSDAKIPPVVDQMIVRLTDLRMYRTTYVDEGFQGETQLLMPV
SLDLEIQRNLSSNWYHSIPDIEITAHLKPMSLILSQDDMTVVLRTLSENLSESSDALPPP
APPPTTDRSSDSVSNKESQGSGTTGPASSNTVVTAAVVEPHKSSKLKNTLKLNFKFDSMT
LVLYSPNGNEIQLLDSHDEQLKLAEFTLGTISTSVHMFSDSSMKASVRLAACLLDDKRPR
IKMVTPRMIAMRPGAEQNMMVEVNYRQGRDGTTLDTVVQDVYLCASMEFLLTVADIFLKA
TQQGFDQKTQPKSSSGAGEKRNINSSTTSKESTVAPAVVSKTEMNVLVRNPEIVFVADLT
RADAPALVMTTQCELVMKSGAEGSQMTAVIKDLKVVACPFLREKREKNVTTVLQPCQVFF
QSTQSPTSPQAMEVSINALTLKVSPIIINTVMTIQSALTPTAETPEELVSPVPVDLWEKR
GWKELKLWFLEEEGDEDPETQPPLIPQGESLQVTIKSVCVTLEAGVGHRTIPMLLAKSSF
HGDVTNWSTLINLHSELNLEVHYYNEIMGVWEPLLEPLEDETRDGFRSWRLDLKMKKKSM
TYTGLSDEVDYHVPDYKTVIVISSKDQLNITLSKCGLAMLSNLGTAFAEAAKQTADSFQK
DEAPFIVKNRLGLPVSVRHSEMFCPIGQQSTSGTVKLQDGETVGMDYSTKADSDQFSAMI
SLSGKDYYIEPTPMGHTSAGVIPLIKVGGGMYNVMHKDSGVTRFLVCQIYSVEGSKYIKI
RSPFQIINHFSIPFKVLEGSTCLGTALPTEEFCVPLDSYRSELSLQPITEDDADDQGEQF
ECSEGFSYEEFSNKQPETHLQQTCRRCGDQGGVLMVNMVPLRDAVTFKHTGGVGENFDVP
FVLHLWPSILLRNLLPYPISYQLKDSGVSAPEATLDPGHSAQLHTAVINQSRLDLCLLNY
MAQDWSSEYSFHSDKEEITFIVFQSLRENDEEDGEGTEMKRAELDIAVHVKYDLGQMVVA
IHSPYWMVNKTGRLLQYKADDIHRKHPLDYDMPLLFSFKPRYFLKNNKVRLMISDSELSD
DFSLDTVGSYGDVKCKGRFRDYLVGVKIDTSSFSLTRIVTFVPFYMLVNRTKHSVFICEV
GQENWTEAQPEQSAIPFWPGNDTKQLKIKVEGCLLPPRTIDFTRPENCLLLHLDNSVGGI
AVDVNLSEHSATIRFSEYHDGAAPFLIINHTNDQTLQFHQSARTEALWVADELLDLSFSL
EEDSSQKEAEQEELEAGKAVHYTWTEPTGSRELCWKCGTYSGKLKTEEDLREDMNNDGKL
FVISFYEGLQRVVLFTEEQRIYKMLCESEKAQLAEQEIILSLQNVGVSLVNNTSGQEVSF
IGITSSDVVWELKPKKKNRWKTLSSKEAEMLENSFKVYTESGPVDHAIVNLENNFQVSFT
PNGMDMRMLQPCDAPLRRHFLPGVKVEYSVSPRQSAYRIQIHRIQIQNQLPGAIFPYVFY
PVKLPKSITMDAEPKPLTDISIVTRTAGHSDISRIKYFKVLIQEMDLKLDLGFLYAILEL
FTPENASIMSSEQEVELFEKDIEYIKTVLNHTSAADTSPISLYEYFHISPIKLHLSLSLS
TGGDDGLKEKRDKELIPVQSLNLLLKSIGATLTDVQDVVFKLAFFELTFQFCTTQQLQWE
VIRHYSKQAIKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPYQGAIQGPEEFVEGMA
LGVKALVGGAVGGIAGAASRITGAMAKGVAAITMDEEYQQKRRETMNKQPTSLREGLTRG
GKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQG
IKRAAETSQDVASLRPPRFIHEDGVIRPYKEREGLGSQMLQKIENGRFAKYRYFAHAKVN
ESDFLMITKRGIFFVTKGTFGQLTCEWQYLFEEFTKDPMIVEDRRLRIEAKERVKSVFHA
KEFGKIINFKNAELAKWVLARLDDARDSLPKY
NT seq
9819 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgaaagcttggtggtagatgtcctcaaccgatttttaggggactacgttgtc
aaccttgacagctcacagctaaagctcggcatatggggaggtgatgctgttcttagaaac
ctggagataaaggaaaatgccttgagtcaactcgacattccttttaaagtgagagccggt
catataggacagctgcagctaaagattccatggaagaacctctacactcagtcagtagag
gcgactctggatggcgtctatctgctcatagtcccaacagcaagtataaagtatgatgca
gcaaaggaggaaaagcagctacaggaggctcgtcagagggagctccagcggatagaggag
acaaagctgaaggctgcagagaaagaggaccccaatctggaaaagcaggacacctttgtg
gagaagcttgtcactcaggtcatcaaaaacctgcaggtcaagatctctaacatccacgta
cgctatgaagatgatgtcactaatccaaattgtcccttgtcatttggagtgtcacttaaa
aacctcagtcttcagacgtctgatgagaactggaatccaagacttttggatgagaattcc
aggctcttcttcaagttggttcaactagacaacttgtttgcctactggaatgtcaactct
ttgctcttctccaatcacagtccagatgaggccttgcgatgtctccagagcagcgtggat
atccacaactccctttctgtcagccatgacttcattttccgtcctatctcagcgggcgct
aaactgcggatgaatcccaggtcagatgtggacttctcttcacccaaagtggaccttatg
gtcaatcttagtgtagtgaccattgaactcaacagacctcagtacattagcatcctggag
ctgctgggttcagtggatatgatgtctcggaatctgccgtacaggaagtacagacccatg
gtccacgttaacaagaatgcccgcatttggtggaggtacgtgatcacaggcatcctggaa
gtggatgtgaagcctcatctccacatgtggtcatggcagcgcattcgcagtcaccggcag
atggtaaaatgttaccgagagctctacaagaccaaaatcaccaacaagaaacccagcgag
gagctgctcaaggaactagaggagcctgagaagaccttggatatttttaacatcacattg
gccagacagcaggctgaggtggaggcaagcaaggcaggcttacgcatttaccgtccaggg
cttaagatggaggaggaggagtcacagggctggttgggctggatgtggagttggggagga
gaggctgataccaaaacaaaagaggtcaagactggaggctttgatgagctgttaaccacc
gctgagaaagccaaactctacactgccattggatacagtgacacagttgctaatcccaac
ctgccaaaggattttgaggacatgaaggtcaatttccacatggagaggctgactgtggcc
atcaaagacaacaaagacaaaaatgagatcatcaggctgactgtgggagagctcaagtcc
acactcacacagagaccgggagcacaagccatcaaagtcacagctcagcttagtctgttt
gaagtcaccggcctggccagtgagcggcctgcaccaaccctcctgtcatcaaggaaagcg
gccacgggagccgggaccccgctgctctgcatcctgtttgagaccaacccgctggatgag
agcgctaaccaacggcttcatgtggaatcacagcccttggaaatcatctatgatgccata
acggtgaacagcatgtcagcgttcttcatgcctcctgacgacctgcagctggatgagctc
accaacgcaaccctcatgaaactggagcagttcagagaccgcacagccaccggtttaatg
tatgtgatcgaaacacagaaggtcctcgatctgaaggtgaacctgatggcctcctatgtc
atcattcctcagactggatttttcgacggcactcagaacatcctgctgttggaccttggg
cattttaagatgtccagtcaaagcaagaagcatctgcctcagctgtcagcttactccagt
aacattgaggacatcatgtccagagcatacgacagctttgacatacagctcagcagcctg
cagtttctttatagcaaaccagatggcgactggaaaatggcccgtaagcagagacggtca
ccactccacattctagagccagtagatctaaaagtggttttcagcagagcgatggtcatc
aaagactcccgcatggcaaagtataagatgtctggagagctccccctgctctctcttcgt
atttctgatgttaaactccgaaatgttcagcagctggtagaaagtatcccactgcctgag
agcagacctacagcacacagcggtgcttcatcctccactacaaagccgaagcagtctttc
accccacagcttactcccagaagacctctgaacttagctgaccagcgctcctctctcatg
tttgagtcatgtgagaccatcagcgtcacctcattggggtcagcggaagatttgttctac
gatgctcccagctctcccattggcgatcggccattcttcccagataatcccatgccgctg
agctacaaaagaaaaggttcagaagctcagaagaacatgacagaattcaccatgaagttt
gaaatcagtgagttatctgttcagttgtgtcgtctctccggggatcaggaggtcacagtg
ctccacttggacatagagggtctgggcacggagctgaaactacacacctttgacatgaca
tcttacacctacctaaaagagatctgcctcaagtgccctgaatacatggattccgaagag
aagcaggttcagctgatcaccactctagacaacacagaagttgaccttcttaccctggag
tatattaaagctgataagactggccctgagttcaagtcccaacacaacaatacagagcaa
tccattaaggtggccgtctcatccctggatgtccatctccatacggaggctctacttaac
gccatgaacttcctcaacaacctccttcctccatccactaagaaggagggacggcaggaa
gagctccccatcatccctgaggaggaggaggccgaagcagagagggaaggagagaagaag
gaggaagctactgtaaccaggaaaaaaagcacaaagaattcaaagtttgccaatgtggta
aatctgcatatcagagccgatctccgctgtctgaaggtttttattcgaggacagaaaacc
aggatctcagagattagtatcgaaggtctggtttctgaggttctgatgaggaaaaaggag
atggaggttctggcaaacctgaagaacattgtgatcctagactgtgacaaagatgcgctt
tacaagaaggctgtgtctatcgcagataaggaagtgtttgatttccacatggtaaactat
acagacgcaacagagggagatgcctatctggacatgtctaaagttgacacctctgtcacg
ctgactgtgggatgcatccaggtcatcttcctcaacaagtttgtctcctctatactgaca
ttcgtcaataacttccaggaggctaaagaggccctggctgaggtgacagtccaggctgca
gaaaaggcagcatcaggcgtgaaggagctggcagagcggagcactcggatcgctctgaac
gtcgacttcaatgcacccatcatcttcctgccccagtcctcctcttcatctaatgtcatt
gtagctgatcttggtctgctgtctgtcaagaacagctttgccaagcagccctttaaaagt
gatgcaaagatcccgcctgttgtggatcaaatgatcgtgagactgactgacctcaggatg
tacaggaccacatatgtagatgaaggttttcagggagagacccagctgttgatgccagtc
agcctagatttggaaatccaaagaaatctttcatccaactggtaccacagcatacctgac
atagagatcactgctcatcttaagcccatgagtctgatcctcagccaggatgacatgaca
gtggtcctgaggactcttagtgagaacctgtcagagagttctgatgctcttccacctcca
gctcctccacccaccactgatcgttcctctgactctgtatctaacaaagagtctcaggga
tctggaaccactggaccggccagcagtaacacagtagtgacggctgctgttgtggagccc
cacaaaagcagcaagttaaagaacactctcaaattaaatttcaagtttgactcaatgaca
cttgtcttgtacagccctaatgggaatgagatccagctgttggattcccacgatgagcag
ctgaagttggcagagtttactctgggcaccatctccacctccgtccacatgttctccgac
agctccatgaaggcctcagtccgactggcggcctgccttctagatgacaagagacccaga
atcaagatggtcaccccgaggatgattgcaatgcgtcctggtgcagaacagaacatgatg
gtggaggtgaactaccgtcagggccgtgatggcaccactttggacacggtggtgcaggat
gtgtacctgtgtgccagcatggagttccttctcacggtggcagatatctttctcaaggcc
acccagcagggctttgatcaaaaaactcaacccaagagcagtagtggagcgggagagaaa
agaaacattaactcctctaccacatctaaagagtccactgtagctccagctgtggtatca
aagacggagatgaatgttctggtgcgtaacccggagattgtgtttgtggctgacttgacg
cgtgctgacgccccggccctggtgatgaccacgcagtgtgaactagtgatgaaaagcggt
gcagagggatcgcagatgactgctgttatcaaggacctcaaggtagtggcctgtcccttc
ttaagagagaagagggaaaaaaatgtgaccacagtgctgcagccgtgtcaggtgttcttc
cagagtactcagtccccaacctcccctcaggctatggaggtctccatcaacgctctcaca
ttgaaggtatctccaataatcatcaacacggtgatgaccatccagtctgcactgactccc
acagcggagacccctgaggagctggttagtcctgttcccgtggacctgtgggagaaacgg
ggctggaaggagctcaaactttggttcctagaagaggagggggatgaagacccagagaca
cagcccccactgataccacagggagagtcattacaggtgaccatcaaatctgtctgtgtg
actctggaggctggagtgggacaccgcactatccccatgctgctggccaagtcctccttc
catggagatgtcacaaactggtccacactcattaacttacacagcgagcttaacctggag
gttcactattacaatgagataatgggagtgtgggaaccgctgctggagcccttagaagat
gagacaagagatggctttcgatcatggagactggatctgaagatgaagaagaagtcaatg
acttacacaggtttgtcagatgaagtggattaccatgtcccagactataaaacggtcatc
gtcatcagcagtaaagaccagctcaacatcaccctctccaagtgtggcctggccatgctt
agtaacctgggcacggcatttgctgaggctgccaaacagacagctgactctttccagaag
gatgaagctccgtttatagtgaaaaaccgcctcggcctgccagtgtccgtccgccacagt
gagatgttttgtcccatcggccagcagagcaccagcggcactgtgaagctgcaggacgga
gagaccgtcgggatggactattccaccaaagcagactccgaccagttctcagccatgatc
tccttgagtggaaaagactactacatagagcctactccgatgggccacacctcagccggt
gtgatccccctgatcaaggtgggcggaggaatgtacaatgtaatgcacaaagactcggga
gtaactcgtttcctggtctgtcagatttactctgtggagggcagcaagtacatcaagatc
cgctccccattccagatcatcaatcatttctcaatcccattcaaagttttggaaggatca
acatgtctgggtacagctctccctactgaagagttctgtgtgcctttggactcatatagg
tctgaactgagcctccagccgataacagaggacgatgctgacgatcagggtgagcagttt
gagtgctcagagggtttcagctatgaagaattcagcaacaagcagcctgagacacacctc
cagcagacatgccggcgctgtggcgatcagggtggtgtactgatggtcaacatggtgcca
ttaagagatgctgtgacattcaaacacaccggaggtgttggggagaactttgatgttccc
tttgtgcttcacctgtggccttccatcctgctacgcaacctgttgccttaccccatctct
taccaactgaaggacagtggagtctctgcccctgaggccactttggacccaggacactca
gcccagcttcacactgcagtcatcaaccaatcaagactggatctctgcctactgaactac
atggctcaggactggtcttctgagtacagttttcacagtgacaaggaagagatcaccttc
atagtgttccagtctctgcgagagaatgacgaagaagatggtgaagggacggagatgaag
agggccgagttggatatagccgtgcatgtcaaatatgacctggggcaaatggtggttgcc
atccactcgccatattggatggtgaacaagacaggcaggttgctgcagtacaaggctgat
gacatccaccgtaaacaccccctggactacgacatgcctctgctcttctccttcaagcct
cgttacttcctgaaaaacaataaggtccgtcttatgatctcagacagtgaactctctgat
gatttctccctggatacagttggtagctatggagatgtcaaatgcaaaggccgattcaga
gactacttggttggtgtgaagattgacacgagcagtttcagtctgacccgcatcgtgacc
ttcgtgccgttttacatgctggtcaacagaaccaagcacagtgtcttcatatgtgaagtg
gggcaggagaactggacagaggctcagccagaacagtcagccattcccttctggcctggg
aatgacaccaagcagctgaagatcaaagtagaaggttgtttgttgcctcctcggactatt
gacttcacacgaccagaaaactgcttattgctgcatctggacaattctgtgggtgggatc
gctgtagatgtgaacttgtcagagcactcagccacaatccggttctctgagtaccacgac
ggtgcggcccctttcctcattatcaaccacaccaatgaccagactctgcagttccatcag
agcgcccggacagaagccttgtgggtggctgacgagctactcgacctctccttctcactg
gaggaggacagctctcagaaggaggcggagcaggaggagctggaggctgggaaagctgtg
cactacacctggactgaacccactgggtcccgagagctttgctggaagtgtggtacttac
agtgggaagctgaagactgaggaggacctgcgtgaggacatgaacaatgacggaaaactg
tttgtgatctccttttatgaagggctccagcgcgtcgtgctgttcaccgaggagcaacgt
atctacaagatgctctgtgagagcgagaaggcgcagctggccgaacaggaaatcatcctc
tcactgcagaacgtgggtgtgtctctggtcaacaacaccagcggccaggaggtctctttt
attggaatcacaagctctgacgtggtgtgggaattaaagccaaagaagaagaatcggtgg
aaaactctgagctctaaagaagctgagatgctggagaacagcttcaaagtgtacactgaa
tctggacccgtagaccacgccatcgtcaacctggaaaacaacttccaggtgtcctttact
cccaatggaatggacatgaggatgctgcagccgtgtgatgctcctctcagaaggcacttc
ctgcctggggtgaaggtggagtacagcgtgtcgccacgacagagtgcctaccgtatccaa
atccaccgcattcagatccagaatcagctgccaggagccatcttcccctatgtcttttac
cctgtaaaactgccaaaatctatcaccatggatgcagaacccaaacctctaactgatatc
agcattgtcaccagaacagcaggacactccgacatctctcgcatcaagtactttaaggtg
ttgattcaagagatggacctgaagctcgatctgggcttcctgtacgccatcctggagctg
ttcacacctgagaatgccagcatcatgagctcagaacaggaggtggaactttttgagaag
gacatagagtatataaagacagtactaaaccatacctctgctgctgacacctctcctatc
agcctctatgagtacttccacatttcccccatcaagcttcatctgagtctctctctgagt
acgggaggagacgacggcctgaaggagaagcgagataaagaactcattcccgtccagtcc
ctcaacctgctgctgaagagcatcggcgccacgctcactgatgtgcaggatgttgtcttt
aagctggccttcttcgagttgaccttccagttttgtaccacccagcagctccaatgggag
gtcatcaggcattattccaagcaggctatcaaacagatgtatgtgctggtgctgggcctg
gatgtgcttggaaatccttttggactgattagaggactgtcagagggagtggaagcattc
ttctatgagccttatcagggagccatccaggggcccgaggagttcgttgaaggaatggct
cttggggtgaaggctctggtgggaggagctgtcgggggtatagcaggtgcagcctctagg
atcacaggagccatggcaaagggtgttgctgccataacgatggacgaggaataccagcag
aagagacgagagactatgaacaagcaacccactagcctgagggaggggctgaccagagga
ggaaagggattagtgtctggttttgtcagtgggatcacagggattgttaccaaacctatt
aaaggagcccagaaggagggtgcagcaggcttttttaaaggtgttgggaaaggtctggtt
ggcgcagtagccagacctacaggaggcattattgacatggccagcagtaccttccaaggg
atcaagagggcagcagagacttcacaagacgtcgcctctctgcgtcctcctcgcttcatc
cacgaagatggtgtcatacgaccatataaggagagggagggcctcggaagtcagatgctc
cagaaaattgagaatggacgttttgccaagtacaggtacttcgctcatgccaaggtgaat
gagtccgacttcctcatgatcaccaagcggggaatattttttgtgaccaaaggcacattt
ggccagctgacctgtgaatggcagtatctgtttgaagagttcaccaaggatccaatgatc
gtagaggaccggcgacttcgcatcgaggccaaggagagagtgaagtctgtcttccatgcc
aaggagtttgggaagatcataaacttcaaaaatgctgagttagccaagtgggttcttgcc
agattggacgacgcaagagacagtttacccaaatactga
DBGET
integrated database retrieval system
