Cebidichthys violaceus (monkeyface prickleback): 137867168
Help
Entry
137867168 CDS
T10484
Symbol
prpf40a
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137867168 (prpf40a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cve03041
]
137867168 (prpf40a)
Spliceosome [BR:
cve03041
]
Complex A
U1 snRNP components
U1 related factors
137867168 (prpf40a)
Complex B
137867168 (prpf40a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
DTW
DUF1525
Motif
Other DBs
NCBI-GeneID:
137867168
NCBI-ProteinID:
XP_068559724
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MSSSDANNGPSQAPPYPGVPPSGIPPPFMGPPGIPPHFPPIGMPPMGQRPPSMTPMPPGI
IPPGIMPPMGAPPMGQMPGMMPPMMPGMMMPPRMPAAAVQPTGPPGVDSSAAAPGTASTT
NGSPQDEQPKKKSLWTEHKSLDGKTYFYNTDTKQSTWEKPDDLKSPAEQMLSKCPWKEYK
SDTGKPYYYNSQTKESRWTKPKELEDLEAMIKAEENGTAEAMAPGITAAPAVHADNTAAM
VTVMEAETATAVSEEHLSQAAVHHAAEVKTADAPVASLENTEATASIEVTKEERPELQKK
TYKWNTKEEAKQAFKELLKEKGVSSNSSWEQAMKMIINDPRYSALPKLSEKKQAFNAYKV
QTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRYKKAEQMFNELEVWSCVPERDRLE
IYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMANVTYRTTWSEAQQYLLDNPTFAED
EELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQRKNREAFQKFLDELHDHGQ
LHSMSAWMEMYPTLSSDIRFANMLGQPGSTPLDLFKFYVEDLKARYHDEKRIIKDILKDK
GFLVEVNTGFDDFGSVISSDKRATTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRK
EAAFKNMLKLATPPLEPETAWEGIRDRFLKESAFEDVTLESERKRIFKDFMHVLEHECQH
HHSKTKKHSKKSKKHHRKRSRSRSGSESEDEEYHKKKKRSQSKSPSERSSSGESERSYKK
SKKHKKKGKKRRHKSASPDSDNEKKGRERDGKREKDLEKDKENDKSRGKPRSDSKQKSPK
RKAAKEEGGWDTSGSELSEGELEKRRRTLLEQLDAP
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcggacgctaataatggcccgagccaagcgccaccttatccaggtgtaccg
ccctcagggatacctcccccatttatgggaccaccaggaataccgcctcatttccctccc
attggaatgccccctatgggacagagaccacccagcatgactcctatgcctcctggtata
atcccccctggtataatgccaccaatgggggcaccgccaatgggacagatgccaggcatg
atgccacctatgatgccaggaatgatgatgcctcctcgcatgccagctgcggctgttcaa
ccaacgggaccgcctggtgttgactcctcagctgctgcacctggaacagctagtaccaca
aatggatctccacaggacgaacaaccaaagaagaagtccctgtggacagaacacaaatca
ttggatggaaagacgtatttttacaatacagataccaagcagtccacatgggagaaacca
gatgatctcaaatctcctgcagagcaaatgctgtccaaatgcccttggaaggagtacaag
tccgacacggggaagccttattattacaactctcagacgaaggagtccagatggacgaaa
cccaaagagctggaagatctggaagctatgatcaaagcagaggagaacgggacggcagag
gcgatggctcctggcatcacagcagctcctgcagtgcacgcagataatacagccgctatg
gtaaccgtgatggaggcagaaactgcgacagcggtctcggaggaacacctgtctcaggcg
gccgtgcatcacgcagctgaggtcaagactgcagatgcacctgtggcttccttagagaac
acagaggccacagccagtattgaagtcacaaaagaagaacggccagagctgcagaagaaa
acttataagtggaacacaaaagaggaagccaagcaagccttcaaagagctgctgaaggag
aagggtgtgtcctcaaactcttcctgggaacaggctatgaaaatgataatcaatgatcct
cgctacagtgcccttcccaaattgagtgagaagaaacaggcgttcaatgcctacaaagtc
caaacagagaaggaagaaaaagaggaggccaggattaaatacaaggagtccaaagagacc
tttcagaggttcctggagaaccacgagaagatgacgtctaccaccagatacaagaaagcg
gaacagatgtttaatgagctcgaggtgtggagctgtgtaccagagagagacaggctggag
atctatgaagatgttttgttctaccttgctaagaaagagaaggagcaagccaagcagctc
agaaagaggaactgggaagctctgaagaacattttggacaacatggccaacgtcacatac
cgcaccacctggtctgaggcccagcagtacctgctagacaaccctacctttgcagaggat
gaggagctgcaaaatatggacaaagaggacgccctcatttgttttgaggagcacatccga
gctctggagaaggaggaggaggaggagaaacagaagactcttctcagggagagaagacga
caacgcaagaaccgagaggccttccagaaattcctggacgagctccacgaccacggtcag
cttcactccatgtctgcctggatggagatgtacccgaccctgagctcagacatccgcttt
gccaacatgctgggccagccgggttccactcccctcgatctgttcaaattctacgtggaa
gacttgaaggcccgctaccacgatgaaaagaggatcatcaaagatattctgaaggacaaa
ggctttctggtggaagtcaacactggctttgacgactttggatcagtcatcagttcagac
aagagagccaccacactggatgcaggaaacataaagctggcattcaacagtttactggag
aaggcagaagccagagagagagagcgagagaaggaggaggccaggaaaatgaaaaggaaa
gaagcagcctttaaaaacatgctgaagctggccacaccaccactggagccagagactgca
tgggaggggatcagagatcgattcctaaaagaatctgcctttgaagacgtgactctggag
tcggagaggaaaaggatattcaaagacttcatgcatgtcttagagcatgaatgccaacat
caccactccaagacaaagaagcactcaaagaagtccaagaagcaccacaggaaacgatcc
cgctctcgatcgggctccgagtctgaggacgaggaataccacaagaagaaaaagaggtca
caatccaagtctccctctgaacgctcatccagtggagaatccgagagaagctataaaaaa
tccaagaagcacaagaagaagggcaaaaagagacgtcacaagtctgcatcgccagactcc
gacaatgagaagaaaggaagagagcgcgatggaaagcgtgaaaaggacttagagaaagat
aaagagaacgacaagtctcgggggaaacctcgctccgactctaaacagaagtctccgaaa
agaaaagctgcaaaagaggagggtggctgggatacatcaggcagtgagctgagtgaagga
gagctggagaaaaggagaagaactttactggaacagctggatgcaccttga
DBGET
integrated database retrieval system
