KEGG   Cebidichthys violaceus (monkeyface prickleback): 137868260
Entry
137868260         CDS       T10484                                 
Symbol
col4a1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cve  Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04510  Focal adhesion
cve04512  ECM-receptor interaction
cve04820  Cytoskeleton in muscle cells
Brite
Exosome [BR:cve04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   137868260 (col4a1)
Glycosaminoglycan binding proteins [BR:cve00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137868260 (col4a1)
SSDB
Other DBs
NCBI-GeneID: 137868260
NCBI-ProteinID: XP_068561022
LinkDB
Position
Unknown
AA seq 1640 aa
MLLPSGTLLLLAALYCSVDLTGAEGCGASCGKCDCSGVKGAKGERGFPGLQGNMGFPGIH
GPEGPPGPMGPTGGLGEPGATGLKGVRGPPGLPGFPGNPGLPGINGNDGPPGLHGIPGCN
GTKGDRGRDGTPGFAGLQGPPGISGIPGMKGDPGGVIGIVPLKGDRGFPGTPGLPGSSGS
HGPIGPPGPRGYHGPKGEPGFPGPPGEMGDRLSYLSQKGEKGDTGFRGPPGPPGNPSEGT
GAHTTELVPGPPGEKGHPGDKGDKGYCTPHLNGVKGEIGPPGPTGKSGKDGEDGLKGQKG
FPGSVGYIGSQGEKGERGPPGHGDGSPGSPGPRGFPGVQGEKGFAGPQGEAGPPGRQVEG
PRGEKGQKGSVGEKGDRGVEGESLVGRPGQPGTTGSPGPPGLPLDPNECDNEKGAPGPTG
PPGLQGELGQKGDRGDTCVQCEGFGPPGLPGPQGPKGDRGPPGLVGGKGEKGVSGYSGQP
GKPGSPGIPGLIGVPGAVGEPGDIFANPGLKGDKGLTGLSGTTGQPGRDGQPGRDGLPGI
PGFKGEPAKEGIKGERGPDGDPGLIGPPGERGPPGLPGFGRPGETGEKGSHGRPGLPGTP
GPSGIKGEPGKGVSTPGPQGVPGTRGETGIPGLQGDRGLHGDSGVPGFPGEKGEHGPPGI
GFPGPPGPKGISGIPGSPGFPGEPGRPGQDGLTGQAGKPGQKGDPGRGLPGLKGSQGSPG
IVGFPGDKGTIGLPGVPGREGQTGAPGPQGIKGDVGPPGSRGVDGLPGAPGKGSPGAPGP
QGPAGESGPYGREGVKGEKGYPGPSGLDMPGLQGEKGISGFPGIPGSKGLPGPPGFPGRD
GHIGNQGWKGEMGVIGTPGVPGFPGPPGTSGSPGFRGDPGTTGPRGDIGETGTKGERGDQ
GLQGPPGNMSDVDMEHMKGEKGDIGNIGLPGGSGEKGHRGLPGNPGVPGKDGESGLPGQP
GEKGDPGFPGDPGRMGPTGQKGSVGEMGIPGVVGPKGTKGDIGTSGHPGFRGTDGQKGDK
GASGEPGIGFPGHPGEKGEIGQPGFPGSPGERGLKGHEGMSGKPGQQGIKGDKGLIGYTG
QTGRPGEKGTPGLPGAAGESGHDGRPGEGGLQGPPGVPGEKGDAGVDGIPGSSGERGDQG
LPGRGFTGPPGVLGGKGDKGSPGFPGTPGNPGVPGIRGDKGLPGSRGPQGETGEKGLTGI
SLEGPKGAKGETGQAGESGPSGVPGLSGVPGGDGQKGDKGDQGLPGFQGESGHKGDSGVT
GLPGQSGLPGIDGQKGERGLQGVPGFPGTRGNFGDIGFKGELGDRGFPGEKGNEGPPGPP
GPSTFIKGDIGFPGAQGLPGPQGPSGLPGQKGQQGVTGLLGPKGDDGIPGYHGQSGSKGD
PGLPGPQGPRGYPGPQGPDGVPGQVGHPGPSSMDHGFLVTRHSQTVEVPLCPEGTSLIYD
GYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEPM
PMSMAPITGEGIKPFISRCSVCEAPAMVIAIHSQTIMIPPCPHGWDSLWIGYSFVMHTSA
GAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATIEDSEMFRKPVPTT
LKAGNLRTHISRCQVCMKRT
NT seq 4923 nt   +upstreamnt  +downstreamnt
atgctgttaccgtccggcaccctgttgctgctggcggctctctactgcagtgtagacctg
acgggggctgagggctgcggggcatcatgtggaaaatgcgactgcagtggtgtgaaagga
gcaaagggtgagcgtggatttcctggtcttcaaggtaatatgggatttccaggaatacat
ggacctgaaggtcctccaggaccaatgggccccacgggaggtctgggggaacccggagct
actggactgaaaggagtgcggggtcctcctggtctgccaggtttcccaggaaacccagga
ctaccaggcatcaatggaaatgatggcccaccaggtttgcatggtatcccaggttgcaat
gggactaaaggagacagagggagggatggcactcctggttttgctggtcttcaaggacct
cctggcatctcaggaattcctggaatgaagggcgaccctggtggtgtgattgggattgtt
cccctgaaaggagacagaggattccctggcacacctggattacctggatcaagtggatct
catggacctattggacctccaggacctcgaggctatcacggacccaaaggtgaacctggc
ttccctggccctcctggagaaatgggtgacaggctgtcctatctgagtcagaaaggagaa
aagggggacacaggatttcgtggcccacccggacctcccggaaatccatctgaaggaacg
ggagcacataccacagagctcgtacctggaccaccgggtgagaaaggacatccaggggat
aaaggagacaaaggctattgcaccccacatctcaatggtgtcaaaggagaaatcggtcct
cctggaccaacaggtaaatctggcaaggatggagaggacgggctgaagggacaaaaaggc
ttccccggatcagttggatacattggttctcagggtgaaaagggagaaagaggaccacca
ggtcacggtgatggttcccctggttctcccggtcctcgtggttttccaggggttcaagga
gaaaaaggttttgctggtcctcagggagaggcaggtccaccaggccggcaagttgaaggg
cctcgaggggagaagggtcaaaagggaagcgttggtgagaaaggagataggggtgtagaa
ggagagtctctcgttggacgtccaggacaaccagggaccactggatcacctggaccacct
ggactaccgcttgaccctaatgaatgtgacaacgagaaaggagctcctggcccaactgga
cctccagggttacaaggggaattgggacagaaaggtgacagaggagatacctgtgttcaa
tgtgaaggcttcggcccacctggattacctggcccccaaggccctaaaggagatcgagga
cctcctgggctagtaggcggcaagggagaaaagggtgtgtctggctattctggacaacct
ggaaaacctggttctccgggtattcctgggttgattggggtacctggtgctgttggtgag
ccaggagacattttcgcaaatcctggtctgaagggggacaaaggtctgactggtctttct
ggtacaacggggcagccgggtcgggatggacagccagggagagatggcctcccaggtata
cctggcttcaaaggagaaccagccaaagaaggcatcaagggtgagcgtggaccagatggg
gaccctggtcttattgggcctccaggagagaggggtccacctggcctgccaggcttcggt
cgaccaggggaaactggagagaagggcagtcatgggagaccaggccttcctggaactcct
ggaccatctggtataaaaggtgagccaggtaaaggtgtgagcactcctggacctcaggga
gtacctggaacacgcggagaaaccggcatacctggacttcaaggtgacagaggcctgcat
ggagactctggggtgccaggtttccctggagagaagggtgaacacggaccccctggaatt
ggatttccaggcccacctggccctaaaggaatcagtggaattccaggaagtccaggattc
ccaggagagcctggaagaccaggacaggatggcttgactggacaagccggtaaacctggg
caaaaaggtgacccagggcggggtcttccaggcctaaaaggctctcagggttccccagga
attgttggcttcccaggagataagggtaccattggactacctggtgttcctggacgagaa
ggccagacaggagcaccaggacctcagggaatcaaaggtgacgtgggacccccaggatct
cgtggagtggatggcttaccaggagctccaggtaaaggctcccctggagctcctggacca
caaggaccagctggagagtcaggaccatacggtagggaaggtgttaagggagaaaagggc
tacccaggtccttctggtctggacatgccggggcttcagggagagaagggaatcagtggg
ttcccaggaatcccaggttctaaaggactaccagggccaccaggcttccctggcagggat
ggacacattggaaaccaaggttggaaaggtgaaatgggggtcatagggacaccgggagta
ccaggatttcctggaccacctggtacatctggatctcctggattcagaggtgatcccggt
actactggacctagaggtgatattggagagactggaactaaaggagaaaggggagaccaa
ggtcttcagggacctcctgggaacatgagcgacgttgacatggagcacatgaagggcgag
aagggagacatcggaaacataggtctacctgggggctctggagagaagggccaccgtgga
cttcctggtaaccctggagtgccaggcaaagatggagagtctggattacctggacaacca
ggtgagaaaggagaccctggtttccccggagaccctggcaggatgggaccaactggtcag
aaaggcagtgtcggagaaatgggaataccaggtgtggttggtccaaagggtactaaagga
gatattggtacatcgggacatcctggattcagaggcaccgacggacagaaaggagacaag
ggagcatctggcgaaccaggtattgggttcccaggacatccaggagaaaagggtgagata
ggccagccaggtttcccaggatcacctggagagaggggtctgaagggtcatgagggtatg
tccggcaagccaggacagcaaggaatcaaaggagacaaaggactcattggttatacaggt
cagacgggtagaccaggtgagaagggaaccccagggctgccaggggctgcaggagaatct
ggtcatgacggtcggcctggtgaaggcggcttgcagggaccgcctggtgttcccggagag
aagggagatgctggagtggatggtatccctggatcctcaggggaaagaggagaccaaggg
ttacctggacgaggtttcactggaccacctggggtgcttggtggcaaaggtgacaaaggt
agtcctggcttccctggcactccaggtaatccaggtgtccctggtatcagaggcgacaag
ggacttccaggctcaaggggaccccagggggagacaggagagaaggggctcactggtatc
tctctggagggccctaagggagcgaagggagagacgggacaagccggagaatcaggacct
tcaggagtaccaggactctctggtgtgccaggcggagatggccaaaagggagacaaagga
gaccagggcctccctgggttccagggagagtcaggacataagggggactctggagttact
ggacttcctggacaatctggccttccaggtatcgatggacagaagggagagaggggattg
cagggcgtccctggcttcccaggtacaaggggtaattttggggacattggattcaaagga
gaacttggagacagaggattcccaggagaaaagggcaatgaaggaccccctggtcccccc
ggccccagcaccttcatcaaaggagatatcgggtttccaggagcacaaggcttaccgggt
ccccaggggccatctgggcttcctggacagaaaggacagcaaggtgtgacaggtcttttg
gggccaaaaggtgatgatggcattcctggatatcatggtcagtctggatccaaaggagat
cctggcctgccagggccacagggacccagaggataccctggcccccaaggacctgacggt
gttccaggtcaagtgggtcaccctggcccctcatccatggatcacgggttcctggtaacc
cgtcacagccaaacggtggaggttccactctgtcccgagggaacctccctcatatatgat
ggctactccttgctctacgtacaaggcaacgaacgctcccatggacaggacttaggtacg
gcgggcagctgtctaaggaagttcagccccatgcccttcctgttctgtaacatcaacaac
gtgtgcaactttgcctctcgcaacgactactcctactggctcacctcccctgagcccatg
cccatgagcatggcacccattactggtgaaggcatcaaacccttcatcagcaggtgttct
gtgtgtgaagccccagccatggtgatagcaattcacagtcagaccatcatgatcccacca
tgccctcacggctgggactctctatggattggctactcctttgtcatgcacacgagtgct
ggtgctgagggatcaggccaggctctggcctctcctggttcctgcctggaggaattccgc
agtgctccattcatcgagtgtcacggccgtggaacctgcaactactacgccaactcctac
agcttttggcttgccaccattgaagacagtgagatgtttaggaaacctgtccccacaacg
ctaaaagcaggcaacctccgaacacacataagccgctgtcaggtgtgcatgaagaggaca
taa

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