KEGG   Cebidichthys violaceus (monkeyface prickleback): 137868269
Entry
137868269         CDS       T10484                                 
Symbol
col4a4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
cve  Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04382  Cornified envelope formation
cve04510  Focal adhesion
cve04512  ECM-receptor interaction
cve04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cve00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137868269 (col4a4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    137868269 (col4a4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    137868269 (col4a4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    137868269 (col4a4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cve04147]
    137868269 (col4a4)
   00536 Glycosaminoglycan binding proteins [BR:cve00536]
    137868269 (col4a4)
Exosome [BR:cve04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   137868269 (col4a4)
Glycosaminoglycan binding proteins [BR:cve00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137868269 (col4a4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 137868269
NCBI-ProteinID: XP_068561038
LinkDB
Position
Unknown
AA seq 1669 aa
MRLTSCSAPCSSTWLWCLLMILSAPPAAVGGDQTELCGGRDCSTCQCFPAKGARGSPGPL
GRQGPQGPPGFPGPLGPPGQKGYRGDEGPTGAGGLKGDSGNVGVPGFPGLEGIPGHPGPA
GGPGFPGLDGCNGTRGEGGDPGLPGGPGPDGEPGFAGLKGFPGDPAVYFIPYPGIPGDVG
STGLPGRQGEPGLSGPMGVLGPPGLDGTNGLPGRPGSRGPPGEKGRSLPGQKGDEGDQGL
QGPPGPFEYVDPPEDLYIKGEQGTQGLKGVCGNQGLPGLDALTGLKGEKGIVGLPGPRGF
SGNPGLPGDRGFKGIRGSPGLPGLIGREGPKGMLGNPGPKGLPQDVDVMYSGDVGDPGAP
GLRGPPGDIGLMGMHGPPGAPGRSTPGPAGVVGQRGVPGSKGDKGDPGQVYRGGPTPGEP
GKPGRPGPRGLKGEQGSPGSYCLPGPPGESGCRGDPGPPGAQGFLGFKGSPGDCSCGPPV
VLRGPPGSVGDLGSPGFTGPPGAQGPRGERGFPGDTGERGQQGLGGFPGVKGFKGQKGDF
TVVDFKGGKGNRGQQGPVGRQGFSGRRGLDGLLGAPGNPGPKGESFTSSPGERGLAGLPG
LKGLSGPSGPPGRGVIGAVGQRGDSGDPGPEGFPGPPGPKGVRGDNLPCVPTNPGAPGEK
GDTGDAGYRGLLGAPGFRGITGPDGPKGDRGRPGLPGPPGRQGPPGFVGDTGEEGPEGIS
FGGDPGSPGLPGSSGLRGPAGDSDVGPSGPIGFPGRPGSQGPKGVPGPPGINGLKGLLGL
AGGPGVQGQRGQDGAPGMTGPQGPTPDFCDAGKPGPMGLFGPQGPIGPPGFYGENGEIGQ
EGPPGFGPQGPQGKPGSPGFPGYPGPQGPTGPGGNSGLPGLDGQKGLMGPRGQDGGPGAP
GWTGALGAPGRTGERGSNGRDGGPGCEGQKGEKGFKGALGPPGETKVVPIKGDRGKEGPP
GINGFPGSRGNKGVQGAASKPGCPGINGPTGIIGPPGLSGPYGPPGPPGSPGQSGPPGFI
GFPGETGDPGDLGCPGKVGEPGRQGCAGSKGDKGDSVGFPGPPGDHGLPGDFGPSGPLGP
QGDPGGPGFIGFPGQRGCKGDPGDQGVLGPSGVVGPPGPRGRSGLPGLPGKAGGDGPPGP
PGFPGLQGPPGPLGLHGLDGLKGVKGDMGTRGLGESGAPGSIGLPGDKGPPGPPGPIGSS
QPGPPGPTGPSGPKGPQGDLGPPGKPGTDCKGPIPGPRGDPGPTGTDGDPGCAGDMGDPG
QNTPVPGDDGDNGDTGCQGPGGPQGPQGPEGLPGIPGNPGLKGIRGSSGLMGLPGNRGPR
GCNGPSGPPGPKGSTGPVGPKGEMGRVSSCPTYPPATPGPPGPPGPPGLDGDVGVQGEIG
RLGPKGRKGNIGSQGPIGPEGSSGPDGGRGGPGLPGESGVLGAKGDSGPTGDRGPRGPNK
NLNSGFLLVLHSQSKTVPYCPLNMRVLWVGYSLLYLEGQEKAHTQDLGQAGSCMRVFSTM
PFSSCNMGTCSYASRNDKSYWLSTTAAVPSIPVGGASIEDHISRCVVCEAPSSPVALHSQ
TSYQPDCPPNWRNLWTGYSFLMHTGAGDEGGGQSLTSSGSCLPDFRAQPFVECQGPRGTC
HYFANIYSFWLTRVETSSSSDRDRTSSTTLTEGWRQRESIGRCSVCMRE
NT seq 5010 nt   +upstreamnt  +downstreamnt
atgcggctgacttcctgctccgccccctgcagctccacctggctctggtgcctcctgatg
atcctgtcggctcctccagcagctgtcgggggcgaccagaccgagttgtgcggcggtagg
gactgctccacctgtcagtgtttcccagccaaaggagcgaggggttctccggggcctctg
ggccggcagggccctcaggggcctccgggcttcccgggccctttggggcctccgggacag
aaaggttacagaggagacgaggggccgacgggagccggaggactaaaaggagactcggga
aacgtcggcgttcctggttttcctggtttagaaggaatcccgggtcacccgggtcctgct
ggaggtcctggctttccgggtctggacggatgtaacggaaccagaggagagggaggagac
cctggacttcctggaggaccaggacctgatggagaaccgggttttgcaggactgaaggga
tttccaggagatccagccgtgtacttcataccgtaccctggaatacctggagacgtcggt
tccactggacttcctggtcgacagggggaaccgggtctctccggtccgatgggggttctg
ggtcctccaggactggacgggaccaacggtctccctggccggcccggctccaggggtcca
cctggagaaaaaggtcgatctcttccgggacagaaaggagacgagggggatcagggcctc
caggggccaccggggccgtttgagtacgtcgaccctccagaagacctgtacattaaagga
gaacagggcactcaggggcttaaaggagtctgtggaaatcaaggactgccgggtttggac
gctctcacagggctcaaaggagagaaaggcattgtgggacttcctggtcccaggggattt
tctggtaacccgggtctgcccggagacagaggattcaaggggatccgaggaagtccaggt
ctcccgggtctgattggacgagagggtcctaagggcatgctgggaaatccaggtcctaaa
ggtctccctcaggacgtggatgtcatgtactcaggtgacgttggagaccccggggccccc
ggactgaggggccctccgggagacatcgggctgatgggaatgcatggcccccccggagcc
cccggcagatccacaccaggtccagcgggtgttgtgggtcagagaggagttccgggatcc
aaaggggacaaaggagatccaggtcaggtgtatagaggcggacccacacctggagaacct
ggaaaaccaggacgtcccggacccagaggactgaaaggagaacaggggagtccaggtagt
tactgtcttcccgggccccccggagagtctggatgtcgaggtgatccggggcccccgggg
gcccaaggcttcctagggttcaaaggtagtcctggcgactgttcttgtggccccccagtt
gtgctgaggggcccccctggcagtgtgggtgacctgggatctccagggtttacaggacct
ccaggggcccaagggccgagaggagagagaggttttcctggagacacaggagaaagagga
caacagggtctgggtggatttccaggcgtcaaagggttcaaaggtcaaaagggagatttc
actgtggtggattttaaaggtgggaaaggaaaccggggccagcagggcccagtaggcaga
caaggattctcagggagaagaggactcgatgggctactgggggcccctggaaaccccggc
cccaagggagaaagtttcaccagttctcccggagaaagaggcctcgctggacttccaggg
ctaaagggcttatcgggaccttcaggcccccctggacgaggtgtaattggagcagtagga
caacgtggggactctggggacccaggacctgaaggattccctggccccccaggaccgaag
ggggttagaggggacaatcttccctgtgtgcccacaaaccccggtgcacccggagagaaa
ggagacacaggggatgcaggttacagaggactgctgggtgctccaggttttcgtggcatc
actggacctgatggacctaaaggagacagaggccggcctggactgcctggaccacctgga
cgacaaggacctccaggttttgttggtgataccggagaagaaggacctgaaggcatcagt
tttggtggagatccaggttctccggggctcccgggctcttctggactcaggggcccagcg
ggagactctgatgtcgggccctcaggacccattggctttccgggacgaccgggctctcag
ggacctaaaggagttcctggcccccccggcatcaatggactaaaaggactcctgggtctg
gctgggggccctggagtgcaaggccagagaggacaggatggggccccaggtatgaccggc
ccccaggggcccacacctgacttctgtgacgcagggaaacctggtcccatgggccttttt
ggccctcaaggacccataggacccccaggtttttatggggagaatggtgagatcgggcag
gagggtcctccaggttttggccctcaaggccctcaaggtaaaccaggctctccaggtttt
ccagggtacccggggccacagggccccactggtcccggcggcaactctggcctgccgggg
cttgacggtcagaaaggtctgatggggccgcgaggccaggatggagggccaggggcccct
ggatggactggggccctcggagccccggggaggaccggggagagagggtccaatggacga
gatggaggtccaggatgtgagggccagaaaggagagaaaggctttaaaggggccctgggg
cctccaggagagaccaaggttgtccccatcaaaggagaccgagggaaagaaggaccgccg
ggcatcaacggctttcctggatcacggggaaataaaggtgtgcaaggagctgccagtaag
ccagggtgtccgggcatcaacggacccacaggcatcatcggacctccaggactctctggg
ccctacggaccaccaggacctccgggatcacctggacaatcaggaccaccaggatttatt
ggcttcccaggggagaccggagatccgggtgacctgggatgtcctggaaaagttggagaa
cccggtcgccaaggatgtgctggatccaaaggcgataaaggagactctgttggtttccct
ggtccacctggagaccacgggcttcctggagacttcgggccctcaggacctcttggacct
caaggagatccaggtggacccggtttcatcgggtttccaggacagagaggatgcaaagga
gatccaggcgatcagggggtactgggcccatcaggtgtggttggtcccccgggtcccaga
ggccgttcgggtcttccaggtctacctggtaaagccggtggtgatggtcctccaggacct
ccaggcttcccgggactccaaggtcctcctggaccgctcggccttcacggactggatgga
ctgaaaggagtgaagggggacatggggaccagaggtctgggtgaatcgggtgctccaggt
tctattggtcttccaggggataaaggtcctccaggtcccccaggacccattggttcatct
cagcccggcccaccaggacccacaggcccctcaggacccaaaggaccacaaggggattta
ggacctccaggtaaacctggaacagactgtaaaggtccaatcccagggcctcgtggagat
cctggccctactggaacggatggagatccagggtgtgctggtgacatgggggatccgggt
cagaacactccagtacctggtgatgatggggacaatggggacacagggtgccaggggcca
gggggcccccagggacctcaggggcccgaaggactgccagggatccccggaaatccagga
ctgaaaggtattcgggggtcttctggcctgatgggattacctggtaatcggggtcctaga
ggctgcaacggtcccagtgggcctccaggaccaaagggatccactggaccggtgggtcca
aagggggagatgggacgagtctcatcctgcccaacttaccctcctgcgaccccgggtccc
ccaggaccccctggcccccccggtctggatggagatgtcggcgtccagggagaaattggc
cgacttggacccaaaggtaggaaggggaacatcgggtcccagggacccataggccctgag
ggatcttcaggtccagatggaggccgaggagggccaggcctgccgggggagagcggagtc
ctgggagccaaaggtgattccggtccaacgggagaccgcggtcctcgtggaccaaacaaa
aacttgaactcgggcttcttgttggtgttgcacagccaatcaaagacggttccctactgc
ccactaaacatgagggtcctgtgggtcggatacagtctgctgtacctggagggtcaggag
aaggctcacactcaggacctgggtcaggcgggttcgtgtatgcgggtcttctccaccatg
ccgttctcctcctgtaacatgggaacctgctcctacgccagtcgtaacgacaaatcctat
tggctgtcgacgacggcggctgtccccagcatcccggtgggtggagcctccatcgaggac
cacatcagccgctgtgtggtgtgtgaagccccctcttcaccggtcgccctgcacagccag
acctcctaccagccagactgcccccccaactggaggaacctgtggaccggatactcgttc
ctcatgcacacgggagccggcgatgagggcggcggccagtctctgacatcatcaggcagc
tgtctgccagacttcagggcccagcccttcgtggagtgtcaggggccccgagggacctgc
cactacttcgccaacatctacagcttctggttgaccagagtggagacctcttcctcctct
gaccgtgaccgcacctcctccaccacgctgaccgagggctggaggcagagggagagcatc
gggaggtgcagcgtctgcatgagggagtga

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