Cebidichthys violaceus (monkeyface prickleback): 137868269
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Entry
137868269 CDS
T10484
Symbol
col4a4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04510
Focal adhesion
cve04512
ECM-receptor interaction
cve04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
cve04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137868269 (col4a4)
Glycosaminoglycan binding proteins [BR:
cve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137868269 (col4a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137868269
NCBI-ProteinID:
XP_068561038
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MRLTSCSAPCSSTWLWCLLMILSAPPAAVGGDQTELCGGRDCSTCQCFPAKGARGSPGPL
GRQGPQGPPGFPGPLGPPGQKGYRGDEGPTGAGGLKGDSGNVGVPGFPGLEGIPGHPGPA
GGPGFPGLDGCNGTRGEGGDPGLPGGPGPDGEPGFAGLKGFPGDPAVYFIPYPGIPGDVG
STGLPGRQGEPGLSGPMGVLGPPGLDGTNGLPGRPGSRGPPGEKGRSLPGQKGDEGDQGL
QGPPGPFEYVDPPEDLYIKGEQGTQGLKGVCGNQGLPGLDALTGLKGEKGIVGLPGPRGF
SGNPGLPGDRGFKGIRGSPGLPGLIGREGPKGMLGNPGPKGLPQDVDVMYSGDVGDPGAP
GLRGPPGDIGLMGMHGPPGAPGRSTPGPAGVVGQRGVPGSKGDKGDPGQVYRGGPTPGEP
GKPGRPGPRGLKGEQGSPGSYCLPGPPGESGCRGDPGPPGAQGFLGFKGSPGDCSCGPPV
VLRGPPGSVGDLGSPGFTGPPGAQGPRGERGFPGDTGERGQQGLGGFPGVKGFKGQKGDF
TVVDFKGGKGNRGQQGPVGRQGFSGRRGLDGLLGAPGNPGPKGESFTSSPGERGLAGLPG
LKGLSGPSGPPGRGVIGAVGQRGDSGDPGPEGFPGPPGPKGVRGDNLPCVPTNPGAPGEK
GDTGDAGYRGLLGAPGFRGITGPDGPKGDRGRPGLPGPPGRQGPPGFVGDTGEEGPEGIS
FGGDPGSPGLPGSSGLRGPAGDSDVGPSGPIGFPGRPGSQGPKGVPGPPGINGLKGLLGL
AGGPGVQGQRGQDGAPGMTGPQGPTPDFCDAGKPGPMGLFGPQGPIGPPGFYGENGEIGQ
EGPPGFGPQGPQGKPGSPGFPGYPGPQGPTGPGGNSGLPGLDGQKGLMGPRGQDGGPGAP
GWTGALGAPGRTGERGSNGRDGGPGCEGQKGEKGFKGALGPPGETKVVPIKGDRGKEGPP
GINGFPGSRGNKGVQGAASKPGCPGINGPTGIIGPPGLSGPYGPPGPPGSPGQSGPPGFI
GFPGETGDPGDLGCPGKVGEPGRQGCAGSKGDKGDSVGFPGPPGDHGLPGDFGPSGPLGP
QGDPGGPGFIGFPGQRGCKGDPGDQGVLGPSGVVGPPGPRGRSGLPGLPGKAGGDGPPGP
PGFPGLQGPPGPLGLHGLDGLKGVKGDMGTRGLGESGAPGSIGLPGDKGPPGPPGPIGSS
QPGPPGPTGPSGPKGPQGDLGPPGKPGTDCKGPIPGPRGDPGPTGTDGDPGCAGDMGDPG
QNTPVPGDDGDNGDTGCQGPGGPQGPQGPEGLPGIPGNPGLKGIRGSSGLMGLPGNRGPR
GCNGPSGPPGPKGSTGPVGPKGEMGRVSSCPTYPPATPGPPGPPGPPGLDGDVGVQGEIG
RLGPKGRKGNIGSQGPIGPEGSSGPDGGRGGPGLPGESGVLGAKGDSGPTGDRGPRGPNK
NLNSGFLLVLHSQSKTVPYCPLNMRVLWVGYSLLYLEGQEKAHTQDLGQAGSCMRVFSTM
PFSSCNMGTCSYASRNDKSYWLSTTAAVPSIPVGGASIEDHISRCVVCEAPSSPVALHSQ
TSYQPDCPPNWRNLWTGYSFLMHTGAGDEGGGQSLTSSGSCLPDFRAQPFVECQGPRGTC
HYFANIYSFWLTRVETSSSSDRDRTSSTTLTEGWRQRESIGRCSVCMRE
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgacttcctgctccgccccctgcagctccacctggctctggtgcctcctgatg
atcctgtcggctcctccagcagctgtcgggggcgaccagaccgagttgtgcggcggtagg
gactgctccacctgtcagtgtttcccagccaaaggagcgaggggttctccggggcctctg
ggccggcagggccctcaggggcctccgggcttcccgggccctttggggcctccgggacag
aaaggttacagaggagacgaggggccgacgggagccggaggactaaaaggagactcggga
aacgtcggcgttcctggttttcctggtttagaaggaatcccgggtcacccgggtcctgct
ggaggtcctggctttccgggtctggacggatgtaacggaaccagaggagagggaggagac
cctggacttcctggaggaccaggacctgatggagaaccgggttttgcaggactgaaggga
tttccaggagatccagccgtgtacttcataccgtaccctggaatacctggagacgtcggt
tccactggacttcctggtcgacagggggaaccgggtctctccggtccgatgggggttctg
ggtcctccaggactggacgggaccaacggtctccctggccggcccggctccaggggtcca
cctggagaaaaaggtcgatctcttccgggacagaaaggagacgagggggatcagggcctc
caggggccaccggggccgtttgagtacgtcgaccctccagaagacctgtacattaaagga
gaacagggcactcaggggcttaaaggagtctgtggaaatcaaggactgccgggtttggac
gctctcacagggctcaaaggagagaaaggcattgtgggacttcctggtcccaggggattt
tctggtaacccgggtctgcccggagacagaggattcaaggggatccgaggaagtccaggt
ctcccgggtctgattggacgagagggtcctaagggcatgctgggaaatccaggtcctaaa
ggtctccctcaggacgtggatgtcatgtactcaggtgacgttggagaccccggggccccc
ggactgaggggccctccgggagacatcgggctgatgggaatgcatggcccccccggagcc
cccggcagatccacaccaggtccagcgggtgttgtgggtcagagaggagttccgggatcc
aaaggggacaaaggagatccaggtcaggtgtatagaggcggacccacacctggagaacct
ggaaaaccaggacgtcccggacccagaggactgaaaggagaacaggggagtccaggtagt
tactgtcttcccgggccccccggagagtctggatgtcgaggtgatccggggcccccgggg
gcccaaggcttcctagggttcaaaggtagtcctggcgactgttcttgtggccccccagtt
gtgctgaggggcccccctggcagtgtgggtgacctgggatctccagggtttacaggacct
ccaggggcccaagggccgagaggagagagaggttttcctggagacacaggagaaagagga
caacagggtctgggtggatttccaggcgtcaaagggttcaaaggtcaaaagggagatttc
actgtggtggattttaaaggtgggaaaggaaaccggggccagcagggcccagtaggcaga
caaggattctcagggagaagaggactcgatgggctactgggggcccctggaaaccccggc
cccaagggagaaagtttcaccagttctcccggagaaagaggcctcgctggacttccaggg
ctaaagggcttatcgggaccttcaggcccccctggacgaggtgtaattggagcagtagga
caacgtggggactctggggacccaggacctgaaggattccctggccccccaggaccgaag
ggggttagaggggacaatcttccctgtgtgcccacaaaccccggtgcacccggagagaaa
ggagacacaggggatgcaggttacagaggactgctgggtgctccaggttttcgtggcatc
actggacctgatggacctaaaggagacagaggccggcctggactgcctggaccacctgga
cgacaaggacctccaggttttgttggtgataccggagaagaaggacctgaaggcatcagt
tttggtggagatccaggttctccggggctcccgggctcttctggactcaggggcccagcg
ggagactctgatgtcgggccctcaggacccattggctttccgggacgaccgggctctcag
ggacctaaaggagttcctggcccccccggcatcaatggactaaaaggactcctgggtctg
gctgggggccctggagtgcaaggccagagaggacaggatggggccccaggtatgaccggc
ccccaggggcccacacctgacttctgtgacgcagggaaacctggtcccatgggccttttt
ggccctcaaggacccataggacccccaggtttttatggggagaatggtgagatcgggcag
gagggtcctccaggttttggccctcaaggccctcaaggtaaaccaggctctccaggtttt
ccagggtacccggggccacagggccccactggtcccggcggcaactctggcctgccgggg
cttgacggtcagaaaggtctgatggggccgcgaggccaggatggagggccaggggcccct
ggatggactggggccctcggagccccggggaggaccggggagagagggtccaatggacga
gatggaggtccaggatgtgagggccagaaaggagagaaaggctttaaaggggccctgggg
cctccaggagagaccaaggttgtccccatcaaaggagaccgagggaaagaaggaccgccg
ggcatcaacggctttcctggatcacggggaaataaaggtgtgcaaggagctgccagtaag
ccagggtgtccgggcatcaacggacccacaggcatcatcggacctccaggactctctggg
ccctacggaccaccaggacctccgggatcacctggacaatcaggaccaccaggatttatt
ggcttcccaggggagaccggagatccgggtgacctgggatgtcctggaaaagttggagaa
cccggtcgccaaggatgtgctggatccaaaggcgataaaggagactctgttggtttccct
ggtccacctggagaccacgggcttcctggagacttcgggccctcaggacctcttggacct
caaggagatccaggtggacccggtttcatcgggtttccaggacagagaggatgcaaagga
gatccaggcgatcagggggtactgggcccatcaggtgtggttggtcccccgggtcccaga
ggccgttcgggtcttccaggtctacctggtaaagccggtggtgatggtcctccaggacct
ccaggcttcccgggactccaaggtcctcctggaccgctcggccttcacggactggatgga
ctgaaaggagtgaagggggacatggggaccagaggtctgggtgaatcgggtgctccaggt
tctattggtcttccaggggataaaggtcctccaggtcccccaggacccattggttcatct
cagcccggcccaccaggacccacaggcccctcaggacccaaaggaccacaaggggattta
ggacctccaggtaaacctggaacagactgtaaaggtccaatcccagggcctcgtggagat
cctggccctactggaacggatggagatccagggtgtgctggtgacatgggggatccgggt
cagaacactccagtacctggtgatgatggggacaatggggacacagggtgccaggggcca
gggggcccccagggacctcaggggcccgaaggactgccagggatccccggaaatccagga
ctgaaaggtattcgggggtcttctggcctgatgggattacctggtaatcggggtcctaga
ggctgcaacggtcccagtgggcctccaggaccaaagggatccactggaccggtgggtcca
aagggggagatgggacgagtctcatcctgcccaacttaccctcctgcgaccccgggtccc
ccaggaccccctggcccccccggtctggatggagatgtcggcgtccagggagaaattggc
cgacttggacccaaaggtaggaaggggaacatcgggtcccagggacccataggccctgag
ggatcttcaggtccagatggaggccgaggagggccaggcctgccgggggagagcggagtc
ctgggagccaaaggtgattccggtccaacgggagaccgcggtcctcgtggaccaaacaaa
aacttgaactcgggcttcttgttggtgttgcacagccaatcaaagacggttccctactgc
ccactaaacatgagggtcctgtgggtcggatacagtctgctgtacctggagggtcaggag
aaggctcacactcaggacctgggtcaggcgggttcgtgtatgcgggtcttctccaccatg
ccgttctcctcctgtaacatgggaacctgctcctacgccagtcgtaacgacaaatcctat
tggctgtcgacgacggcggctgtccccagcatcccggtgggtggagcctccatcgaggac
cacatcagccgctgtgtggtgtgtgaagccccctcttcaccggtcgccctgcacagccag
acctcctaccagccagactgcccccccaactggaggaacctgtggaccggatactcgttc
ctcatgcacacgggagccggcgatgagggcggcggccagtctctgacatcatcaggcagc
tgtctgccagacttcagggcccagcccttcgtggagtgtcaggggccccgagggacctgc
cactacttcgccaacatctacagcttctggttgaccagagtggagacctcttcctcctct
gaccgtgaccgcacctcctccaccacgctgaccgagggctggaggcagagggagagcatc
gggaggtgcagcgtctgcatgagggagtga
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