Cebidichthys violaceus (monkeyface prickleback): 137868384
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Entry
137868384 CDS
T10484
Symbol
col18a1a
Name
(RefSeq) collagen type XVIII alpha 1 chain a isoform X1
KO
K06823
collagen type XVIII alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
Exosome [BR:
cve04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
137868384 (col18a1a)
Proteoglycans [BR:
cve00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
137868384 (col18a1a)
Glycosaminoglycan binding proteins [BR:
cve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137868384 (col18a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137868384
NCBI-ProteinID:
XP_068561250
LinkDB
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Position
Unknown
AA seq
1462 aa
AA seq
DB search
MMPKMRTQFGVLLLLTLWVVYSDAWFWAWTGTTTFPPTVDHEGSGSPAGSGNAPSENIAG
VGAEILDEGHGIQKNVQTWGETTEGLRLTNLIPTTQPENEHESEKGTARISSRTRKPEDN
GVSLLQLIGDPPPSTIAQVYGPDGSPGYVFDRDANTGQLARAHLPSPFYRDFALIFNLKP
TTERAGVIFSVTDATQKIMYVGVKLSAVQGGNQNVLLYYTEPNSQKSYEAAKFLVPSMRD
TWTRFAIAVRDDKVMFYLNCDTDPQVMRIERSPDEMDLQTGAGVFVGQAGGADPDKFVGV
IGELKVVGDPRAAERHCEEDEDDSDMASGEGSGYEETRPPQPTVAKHRMTTAPPSSRPIQ
QPPLTRKEEVSIARETASDSEYVSLSVESGRELPGSPGPAGGKGEKGDRGDAGLKGDRGP
IGTKGDAGSGSGSRGGARGEKGEPGEKGFKGSAGFGYQGKKGDTGPPGPPGSPGPPGPAT
EFSVGSDGSVSSRGPGPRGPAGPQGAAGLQGQPGADGEPGDPGEDGKMGSDGPPGFPGTP
GDSGTKGEKGDRGEGQPGPRGSPGPPGPPGTGLRSTFVDMEGSGFPDLESVRGLPGLPGP
PGPPGPPGPATASTAGAASNSGAFGPPGKDGVPGQPGLPGLPGTDGRSGVSGPKGDKGDS
GDLGLPGAVGEKGSQGDPGLPGTSGETGLAGLPGPLGPVGPPGPPGPPGPSYRVGFDDME
ASGGGFSNGLPGVRGPEGRQGSPGLPGLPGKAGLPGIPGQKGSEGLAGKDGRPGLDGFPG
PQGPKGDHGNKGERGESGRDGTGLQGPPGPPGSPGRIIYQTSGDVDGVVGYDGSQGGAGL
PGQAGFPGPIGPKGDRGDPGLPSYGVKGEKGEPGLVIGPDGNLLHLEGLTGPKGDRGSPG
PVGPTGQYGPSGIKGEIGMPGRPGRPGVNGYKGEKGETGVGYGYPGVPGQPGPPGPPGPA
IPLDRFNRYDETSRNYPATKGEKGEHGDRGLPGIPGTASNFDIYTFKNELKGERGDLGVK
GEKGEPSGGYYDPRFGGVQGPPGPPGKPGLEGPKGEPVLGPPGPQGPPGTPGIGYDGRPG
PPGPPGPPGPQGSSLLPGAYRPNHSLNIPGPPGPPGSPGSPGHSSGVTVLRSYDTMIATA
RRQTEGSLIYIIDKADLYLRVRDGLRQVMLGNYSPFFRDLENEVAEVQPPPVILYPQSQD
QSHNNGAGHYSQGGSAIQPIEPPPLRPVDPRYPAQYDPRFPDPRHTGQTDGRLATQQTEN
RYPVTPQRRPSPPVAQPAGHVEPSASGLHLVALNAPQSGNMRGIRGADFLCFQQARAVGL
KGTFRAFLSSKLQDLYTIVRRSDRDSTPIVNLKHQVLFSSWESLFGDDVSKMRENVPIYS
FDGRDIVRDSAWPEKMVWHGSSNKGHRQTDHYCETWRAGDHAVTGLASSLQSGHLLQQTS
SSCSGSYVVLCIENAFTSHSKK
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctaagatgaggacccagtttggagttttgcttttgttgaccctgtgggtggtc
tactctgatgcttggttctgggcctggactggtactacaacttttcccccaacagtggac
catgaggggtctggcagtccagcaggtagtggaaatgcaccatcagagaacattgcaggt
gttggagcggagatccttgatgagggacatgggatccaaaaaaatgtgcagacttggggt
gagaccactgagggacttcgactgaccaatctaatacctacaacacaaccagagaatgaa
catgaatcagaaaagggaacagcaaggatttcgtcacgcacacgtaaacctgaagacaat
ggagtctccctgctacagctgattggggatcctcctccaagtacgatcgcccaggtctat
gggcccgacggcagccccggctatgtttttgaccgtgacgccaacacgggccagctggcc
cgcgcccacctgccgagcccgttctaccgagacttcgccctcatcttcaacttgaaaccc
accaccgagcgtgccggcgtcatcttctccgtcacagacgccacacagaagatcatgtat
gtgggtgttaaactgtcggccgtgcagggcggcaaccagaatgtcctcctgtactacaca
gagcccaactcccagaagtcgtacgaagcggccaagttcctcgtgccctccatgagggac
acctggactcgttttgccatcgctgtgagggacgacaaggtgatgttctacctcaactgt
gacacagaccctcaggtgatgcgcatcgagaggtccccagacgagatggatctgcagacc
ggtgccggggtctttgtcgggcaagctggaggagctgatcctgacaagtttgtgggagtg
atcggtgagctgaaggtggtgggagacccccgtgctgctgagaggcactgtgaagaggat
gaagatgactcagatatggcttcaggtgaaggaagcggctatgaagaaaccagaccccca
cagccaaccgtggcgaaacatagaatgacgactgctcctccatcttcccggcccattcag
cagccaccactgaccaggaaagaggaagtgtcaattgcaagagaaacagcaagtgactcc
gagtacgtttcactttctgtggagtccgggcgggagcttcctgggtcaccaggtccagct
gggggtaaaggagaaaagggtgaccggggggatgcaggactgaaaggagacaggggtcca
attgggacaaagggagacgctggctctggatccggctcacgaggtggagcccgtggagag
aagggagaaccaggagaaaagggattcaagggcagtgcaggcttcggctaccaaggaaag
aagggcgacactggcccacctgggccacctggctcccccggccctccaggacccgcaacc
gagttctcagtcggcagcgacggctcagtttcttccagaggccccggaccccgaggaccg
gccggaccacaaggtgctgcgggcctccagggacaaccaggagctgatggagagccaggg
gatcctggtgaggatggaaaaatgggttctgatggaccacctggcttcccaggaacccca
ggtgactctggaactaaaggagaaaagggagaccgtggagagggtcaacctggcccgagg
ggatccccaggacctccgggacccccaggaacaggactcagatctacttttgtggacatg
gaaggctctggtttccctgatctggaatccgttcggggattgcctggcctaccaggtcct
cctggtccccccggtccccccggtcctgctactgcctctacagcaggagcagcatcgaat
tctggggcgttcggaccaccaggaaaggacggggtgcccggtcaacctggcttgcctggt
ttgccaggtactgatggccgctcaggagtttctggtcccaagggagataagggtgattca
ggcgatctgggtcttccaggagcagtcggagagaagggatctcaaggagaccctggttta
ccgggaacctcaggagagactggactggctggtctgcccggacctcttggaccagttggg
cctccagggcctccggggcctcctggaccaagctatcgtgttggatttgatgacatggag
gcctccggtggaggtttcagcaatggactgcctggcgtcagaggacctgagggaagacag
ggttctcctggcttgcctggacttccgggcaaagccgggttgccaggtataccaggtcag
aagggcagtgaaggtctcgcaggaaaagatggacgtccggggttggatggcttccctgga
cctcagggaccaaagggtgaccatggcaacaaaggagagaggggtgaatcgggtcgagat
ggaacaggtctccaagggccccccggaccaccgggatcaccaggacgaatcatctaccaa
acatctggcgatgttgatggtgttgttggctatgacgggtctcagggaggagctggttta
cctggccaagctggattcccaggtcctattggaccaaagggggacagaggagaccctggc
cttccaagctacggtgtcaagggtgagaaaggtgaaccaggcctagtgatcgggcctgat
ggaaaccttctgcatctggaagggctgacgggtccgaagggagacagaggatcacctgga
cctgttggacccactggccagtatgggccatctggaataaagggtgaaatcggaatgcct
ggaagacctggtcgccctggtgtaaatggttacaagggtgagaaaggagagacaggagtt
ggctacggctacccaggagtccctggccaaccaggaccacctggaccccctggaccagcc
attcccttagatcgcttcaaccgctatgatgaaacttcaaggaattacccagcaactaaa
ggggaaaaaggagagcatggagaccgaggacttccaggaatcccagggaccgcctctaat
tttgatatttacacattcaagaatgagctgaagggagagcgcggagacctcggtgtgaag
ggagaaaagggagagcctagtggcggatattatgacccacgttttggaggagtacaaggc
ccaccagggcctcctggcaaaccaggcctagagggtccaaagggagaacctgtattgggt
cctcctggaccccaggggccaccagggacaccagggattggttacgatggccgtccaggt
cctccaggaccacctggaccaccaggaccccaaggatcttccttacttcccggagcatat
aggcccaatcactccctcaatattcctggacctcctggtcctccgggttcgcctggaagt
cctggtcactcttctggggttactgttttaaggtcatatgacacaatgatagctactgcg
agacgtcagacggagggaagcctcatctacatcattgacaaagctgacctctatttgaga
gtgcgcgatggactgcggcaagtcatgcttggaaactacagtcccttcttcagagatctg
gagaacgaggtggcagaagtccagcctccacctgtgatcctgtacccccagtcccaggac
cagtcccacaacaacggagctggccattactcccagggtggttcggccatacaacccatt
gagcctccaccactacgacctgtagaccccagataccccgcacagtatgatcccagattc
ccagacccgagacacacaggccagacagatgggagattagccacacaacagactgagaac
agataccctgtaactccgcagcgacgacccagcccacctgtagcgcagcctgccggccat
gtggagccatcagcatcaggactacacctcgtcgccttgaacgcccctcaaagtggtaac
atgcgaggaatccgcggggcagacttcctgtgcttccagcaggcccgcgctgtgggcctg
aaggggaccttcagagctttcctgtcctccaagcttcaagacctctacaccatcgtccgc
aggtcggacagggacagcacccccatcgtgaacctcaagcaccaagtgttgttcagcagt
tgggagtctctctttggggacgatgtgagcaaaatgagggagaatgtaccaatctactcc
ttcgatggtagagacatcgtcagagacagcgcatggccggagaaaatggtctggcatgga
tcaagcaacaaaggccaccggcaaacagaccactactgcgaaacatggcgggcgggcgac
cacgccgtgactggtctggcatcatctctacagagcggccacctcctgcagcaaacctcc
agcagctgctccggctcttacgtcgtcctctgcatcgagaacgccttcacatcacactcc
aaaaaataa
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integrated database retrieval system
