KEGG   Cebidichthys violaceus (monkeyface prickleback): 137868561
Entry
137868561         CDS       T10484                                 
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
  KO
K17890  autophagy-related protein 16-1
Organism
cve  Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04136  Autophagy - other
cve04140  Autophagy - animal
cve04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:cve00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    137868561 (atg16l1)
   04136 Autophagy - other
    137868561 (atg16l1)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    137868561 (atg16l1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cve04131]
    137868561 (atg16l1)
   03029 Mitochondrial biogenesis [BR:cve03029]
    137868561 (atg16l1)
Membrane trafficking [BR:cve04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    137868561 (atg16l1)
 Others
  Specific organelles associated proteins
   Auto phagosome
    137868561 (atg16l1)
Mitochondrial biogenesis [BR:cve03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    137868561 (atg16l1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 ATG16 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_TEP1_2nd DSE1_N Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_VPS8 NBCH_WD40 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_NOL10_N eIF2A Beta-prop_ACSF4 Tricorn_2nd CFAP251_N Beta-prop_IFT140_1st Beta-prop_SPT8 PUMA_CC HALZ Rab11-FIP3 Beta-prop_DCAF12 KASH_CCD EXOC6_Sec15_N Beta-prop_Vps41 FKBP15 NET2A AP5B1_middle CLIP1
Other DBs
NCBI-GeneID: 137868561
NCBI-ProteinID: XP_068561528
LinkDB
Position
Unknown
AA seq 619 aa
MAERRGECSWKRHISEQLKVRDRVQRQAFEEIVLQYNRLLEKSDLQTVLSERYQTDKYDV
QRGHEASSGTDGRSDVLQQEMSQMRIKHQEELTELHKKRGELAQNVIELNNQIQQKDKEI
QSNEAKMVEYQQQITTLEGDCRELRSCLQDLERANQTLKDEYDALQITFSALEEKLRKTT
DDNQELVSRWMAEKAQEANKLNAENEKDTRRRQAKLQKELADAAKEPLPIEPDDDIEVLA
EDVGKGAGETSPKRPLSRTPSKRTSQPPPGGLLDSISNIFGVSECVKSGLAPPLSRRRPT
NSFSSSPEHPEAPSGVCAEVRVPSTALHVFEAHDGEVNAVRFSPGSRLLATGGMDRKVKL
WEVVAGRCEPKGALTGSNAGITSIEFDSAGSYLLAASNDFASRIWTVEDYRLRHTLTGHS
GKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFD
KKVRFWDIRAESIVQELELFGRVTSLDLNHDRTELLTCSRDDLVKIIDLRTNAVRQTFSA
PGFKCGADWTRVTFSPDGSYVAGGSADGALYIWSVVTGKVDRTLDRNHNSAINSVSWSPS
GAFVASVEKGSRAILWSDM
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggctgagcggaggggtgagtgttcgtggaagagacacatctcagagcagctgaaggtc
agagaccgagttcagagacaggcctttgaggagatcgtcctccagtataaccgtcttctg
gagaagtcagacctgcagactgttctgtcagaaagataccagacggacaaatatgacgtc
cagagaggacacgaggccagctcggggacagacggtcgtagtgacgtcctgcagcaggag
atgtctcagatgagaatcaaacaccaggaggagctgacggagctgcacaagaaacgagga
gagctggctcagaatgtgatcgaactgaacaaccagattcaacagaaagacaaagagatc
cagagcaatgaggccaagatggtggagtaccagcagcagataaccaccctggagggagac
tgtcgggagctgaggagctgccttcaggacctggagagggcgaaccagaccctgaaggac
gagtacgacgccctgcagatcaccttctctgctctggaggagaagctgaggaagaccaca
gacgacaaccaggagctggtgtctcgttggatggctgagaaagctcaggaggccaacaag
ctgaacgcagagaacgagaaggacaccagacgcagacaggccaaactgcagaaggaactg
gccgacgcagccaaagagcctcttcccatcgagccggatgacgacatcgaggttctggca
gaggacgtagggaagggggctggagagacctcgccgaagagaccgctcagcagaactccc
agtaagagaacctcccagcctcctcctggtggtctgctggactccatctccaacatattt
ggcgtgtctgagtgtgtcaagtctggactcgcccccccgctctccaggcgtcgacctacc
aactctttcagctcctcacctgaacaccctgaagctccatctggagtgtgtgcagaggtt
cgagtcccttcaacagctctgcacgtgtttgaagctcacgacggtgaggtcaatgcagtg
aggttcagccctggatctcgtcttctagcaacaggagggatggaccgcaaggtcaagctg
tgggaggtcgtcgcaggtcgctgtgagcctaaaggcgctctgaccggcagcaacgctgga
atcaccagcatcgagtttgacagcgctggctcttacctgctggcggcctccaatgacttt
gccagtcgtatctggaccgtagaggactacagactgagacacaccttgacgggtcacagt
gggaaggtgctgtcggctcgcttcctattggacaacgctcgcatcgtctccgggagctac
gaccgaacgctcaaactctgggacctccgcagcaaagtctgtatgaagacggtgtttgct
ggttccagctgtaacgacatcgtgtgcacagagcagtgtgtgatgagcggacactttgat
aagaaagttagattctgggacatcagagcggagagcatagttcaggagctggagctgttt
ggcagagtgacctctctggacctgaaccacgaccgcacagagctgctcacctgctccaga
gacgacctggtgaagatcatcgacctgcgcaccaacgctgtcagacagacgttcagtgct
ccgggcttcaagtgtggagctgattggaccagagtcacctttagtcctgacggcagctac
gtggccggtggatcagctgatggagctctgtacatctggagcgtcgtgacggggaaagtg
gaccggactctggaccggaaccacaactctgccatcaactcggtgtcctggtcgccttcg
ggagcgttcgtggccagtgtggagaaaggaagccgggccatcctgtggtctgacatgtga

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