Cebidichthys violaceus (monkeyface prickleback): 137868590
Help
Entry
137868590 CDS
T10484
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03030
DNA replication
cve03410
Base excision repair
cve03420
Nucleotide excision repair
cve03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137868590 (rfc1)
03410 Base excision repair
137868590 (rfc1)
03420 Nucleotide excision repair
137868590 (rfc1)
03430 Mismatch repair
137868590 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cve03032
]
137868590 (rfc1)
03400 DNA repair and recombination proteins [BR:
cve03400
]
137868590 (rfc1)
DNA replication proteins [BR:
cve03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137868590 (rfc1)
DNA repair and recombination proteins [BR:
cve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137868590 (rfc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
RuvB_N
Rad17
AAA_5
AAA_17
AAA_30
AAA_7
AAA_14
BRCT_2
AAA_18
AAA_33
nSTAND3
NTPase_1
AAA_16
AAA_19
RNA_helicase
NPHP3_N
Herpes_UL25
Motif
Other DBs
NCBI-GeneID:
137868590
NCBI-ProteinID:
XP_068561563
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MGTVRAQDIRRFFAPTSDKSAVQKPAPTGNVKTEKKKKKNPFSSDEDVKKKETTKVKSSE
PEEKRKHSETKRRKHAVIESDSEDEKPARKSKKSPKEKQTASKIKPPPKKDPVQYVSETD
SDSDNFQSLKKVSKPKQNGTAKQTKAGVGGAARPGVKEGLKSPPKPSSTQGKAVLKSPVT
PKSTQPPPRKQTPTSVLDYFGSAAVQRSDKKLVASTKRKAPTQEADDLMSDEQIAKQLQM
EEDMMELEKQVHEDEEFAKTLAMLDEEPQAKKARKGSDEKPAATAAPRRSSTDSAAGSKS
SPSKTTRRGRVSEDAIGPTPKKDPAPVKASSKLAMMKKENEERDEGSKGKTPVSLTKVKI
SPKKEPLAALSSDKKFTPKTGTTLTTVKTSPKKPESTSPEDAEKKKVNSAAFRNFLNRDG
PRALGSKEIPQGAENCLEGCMFVLTGVMESMERDDAKSLIERYGGKVTGNISKKTTYLVQ
GRDSGVSKLEKAESFGTKILDEDALLELIRTKPGKKSKYEITAEAECKASKTRTPPSKTS
KSTPKAQKISPSKGNSRSPHTPSPSKTGLVQGHGARTRGGATPPGRGSGHTARRELGLSS
SSSSGKSSPSATGDDASLLWVDKYRPRSLKTVIGQQGDQSCANKLLRWLQNWNKHHSGSS
KPAAARFGKFGGGRDDGSAYKAALLSGPPGVGKTTTAALVCEELGFSYVEMNASCCRSKN
NLKEVVAESLNNTSIESFYKGTSEKVSSKHVLIMDEVDGMAGNEDRGGIQEMIGLIRNSK
IPIICMCNDRNHQKIRSLANYCFDLRFQRPRVEQIKGAMMSLAFKEGIKIPPPALNEIIL
ASNQDVRQVIHNLSMWSAKDKVMTYDQCRSDAASARKDMKMGPFDVCRKVFAAGEETSHM
SLIDKSDLFFHDYSLAPLFVQENYLHVRPKAAGGDLKSHLMLLSKTADSISDGDLVDRQI
RSRQNWSLLPTQAIYASVLPGELMKGYMSQFPTFPSWLGKYSSTNKHSRIVQELASHMGL
KTLCSRQAVNLDYLHYLRQTLLSPLQRLGAEGAGEAVQLLDNYQLIKEDVDSIMEISVWG
GQPDPYSKLDPKVKAAFTRAYNREVHLTPYSLQVVKKGRRGGGGGESEVGGEDVDNEAQE
SEDEGLKTDAMIKQKKAKAPKESKKKEKKDDSGKDKGKGKGKGKGKAKK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtccgcgcgcaggacatcaggcggttctttgcaccgacttcagacaagtcc
gcggtgcagaaaccagctccaaccggaaacgtcaaaacagagaagaagaagaagaagaat
cctttctcttccgacgaggatgtgaagaagaaggagaccaccaaggtgaaaagctccgaa
ccagaggagaaacggaagcatagtgagacaaaacggaggaagcatgcagtcatagaatcc
gactccgaggatgagaagccagcgaggaagtcgaagaagtcccccaaagagaaacagacg
gcgagcaaaattaagccaccgcccaaaaaagatcctgtgcagtatgtctctgaaacagac
tcagacagtgacaattttcagtctttgaagaaggtctccaaacccaaacagaacggcacg
gccaaacagacaaaagcaggtgtgggcggtgctgctcgtccgggagtcaaagaggggctg
aagtctccgcccaagccctcctccacacaggggaaagctgtgctgaagtctcccgtcacc
ccaaagtcaactcagcctcctccacgcaaacaaacccccacctcagtactcgactacttc
ggcagcgcggctgtccagcggtccgataagaagctcgtagccagcaccaagcgaaaggcc
ccaactcaggaagcagatgatctgatgagtgatgagcaaatcgccaaacagctgcagatg
gaggaggacatgatggagctggaaaagcaggtccatgaggacgaggaatttgccaaaact
ctggccatgctggatgaggagcctcaagctaagaaggctcgtaaaggctctgatgaaaaa
ccagccgctactgcagctcccagaaggagcagtacagactctgctgctggcagcaagagc
agcccgtcaaagaccacccgaaggggcagggtgtcggaggatgcgattggcccgactcct
aagaaggaccccgcccccgtcaaagccagctccaaactggccatgatgaagaaagagaac
gaggagcgagacgaagggtcgaagggcaaaacgccggtttcgctcacaaaagtaaaaatc
tctcccaaaaaggagccgctcgctgcgttgagctcggacaagaagtttactcccaaaacg
ggaaccacacttaccacggttaaaacttctcccaagaaaccagagagtacgagtcctgag
gacgcagagaagaagaaggtcaactctgcagcgttcaggaacttcctcaacagagatgga
ccacgagcgctgggctccaaggaaatcccacagggtgcagagaactgtttggagggctgc
atgtttgtgctgacgggggtcatggagtccatggagagggatgacgccaaatccctcatc
gagcgctacggcggcaaggtgacgggcaacatcagcaagaagaccacctacctggtgcag
ggcagagacagcggagtctccaagctcgagaaggcggagagttttggtaccaagatccta
gatgaggatgctctgttggagctgatcagaaccaaaccagggaagaagtccaagtatgag
atcactgcagaggctgagtgcaaagcctcaaagaccaggactccccccagcaagacatca
aagagcacccccaaagcccagaagatctccccctccaaggggaattcccggtcccctcac
accccgagcccgtcaaagaccggcctggtgcaaggccacggtgccaggaccagaggtgga
gccactccacctgggagaggctcgggtcacacagcccgccgggagctcggcctttcctct
tcttcctcttcaggaaagtcatccccatcggcgacaggggacgacgccagtctgctgtgg
gtggacaagtaccgcccgcgctctctgaagactgtgattggtcaacagggagaccagagc
tgtgccaacaagctcctccgctggctgcagaactggaacaaacaccacagcggctcttcc
aagccagcagctgcaaggtttggtaagtttggaggagggagagatgatggatcagcatac
aaagctgctctgctctctggacctccgggcgtggggaagaccactacagcagctctagtc
tgtgaggagttgggcttcagctacgtggagatgaacgcaagctgctgtcgcagcaaaaac
aatctgaaggaagttgtcgcagagtcgctcaacaacaccagcatcgagagcttctacaaa
ggcacctctgagaaagtgagcagtaaacacgtcctgatcatggatgaggttgatggcatg
gctggcaacgaagaccgcggaggaatacaggagatgatcggcctaatcagaaattcaaag
attcccatcatctgcatgtgcaatgatcgtaaccaccagaagatcaggtcgctggccaac
tactgcttcgatcttcgcttccagaggccgcgagtggaacagatcaagggagccatgatg
tccctcgctttcaaagagggaatcaagatcccacccccagctcttaacgaaattatccta
gcctccaatcaggatgtccgacaggtgatccacaacctgagcatgtggtcggccaaagac
aaggtgatgacgtatgaccagtgcaggtctgacgcagccagtgcccgcaaggacatgaaa
atggggccgtttgacgtttgtaggaaggtgtttgccgcaggggaggagacctcccacatg
agtctcatcgacaagtcggacctcttcttccacgactactcgctagcgccgctctttgtc
caagagaactacctgcatgttcggcccaaggctgccggtggggacctgaagtcccacctg
atgctgctcagcaagacggctgactccatctctgacggagacctggtggaccgacagatc
cgctctcggcagaactggtcgttgctgcccacccaggccatatatgccagtgtgttacca
ggcgagctgatgaaaggctacatgagccagttccccaccttccccagctggctcggcaaa
tactcctccaccaacaaacattcccgcatcgtccaggagctggcctcacacatgggtttg
aagacgttgtgcagcagacaggcggtgaatctggactacttgcactacctgcggcagacg
ctgctgagccctctgcagaggctcggagcggagggcgccggggaagctgtgcagctgcta
gacaactaccagctcatcaaggaggacgtggacagcatcatggagatcagcgtctggggc
ggacagccagacccctactccaaactggaccctaaggtgaaggcagcattcacgcgggcc
tacaacagagaagttcacctgacgccatactccctgcaagtggtgaagaagggccgccgc
ggtggtggcgggggggagtctgaggtgggaggagaggacgtggacaacgaagcgcaggag
tccgaggacgagggcctcaaaacagacgccatgatcaaacagaagaaggccaaagcaccc
aaggagtcgaagaagaaggagaagaaggacgattctgggaaagacaaagggaagggaaaa
ggaaaggggaaaggcaaggccaagaaatga
DBGET
integrated database retrieval system
