Cebidichthys violaceus (monkeyface prickleback): 137868757
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Entry
137868757 CDS
T10484
Symbol
ddx55
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cve03009
]
137868757 (ddx55)
Enzymes [BR:
cve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137868757 (ddx55)
Ribosome biogenesis [BR:
cve03009
]
Eukaryotic type
Pre-60S particles
Helicases
137868757 (ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
CTE_SPB4
ResIII
CTT_SPB4
SBF_like
YbjM
HMUDK_HMUD1
MBOAT_2
Motif
Other DBs
NCBI-GeneID:
137868757
NCBI-ProteinID:
XP_068561752
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MDNSTEGTWDTLPIQLTEGILQTLEEVKFTHMTPVQSACIPLFMSNKDVAAEAVTGSGKT
LAFVIPIIELLLKREEKLKKMQVGALVITPTRELALQISEVMEMFIQKFPQFTQILLIGG
TNPIDDVEKFKDKGAHIVIATPGRLEDMFRRKADGLDLASSVRSLDVLVLDEADRLLDMG
FEASLNTILGHLPKQRRTGLFSATQTQELEKLVRAGLRNPVRITVKEKGVAASAVAQKTP
SRLCNYYTVKTENKFNNLVAFIRQHKQEKHLIFFRCFIVVFIFCVFVFSAFVHRCGRTAR
IGNHGNALVFLLPMEESYVNFLSINQKCPLQKLVLTGEVVDVLPKVKAMSLADRAMFDRG
MRAFVSYVQAYAKHECSLIFRLKDLNFATLARGFALLRMPKMPELKGKTIPGFTRTTLDT
DTIRYKDKNREKQRQKMLAELKEKLKTPLPKRNFIKNKSWSKQKTKKERRKKRSAKRKLE
EGSDIEDEDMNELLNDTRILKRLKKGQISEEDFEKQITSGTGGAPRDGEQL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggataactcgacagaagggacgtgggacactttaccgattcaactcactgaagggatt
ctacaaacgctcgaggaagtgaagttcacgcacatgacacctgttcagtctgcttgtatt
ccgctgttcatgagtaacaaagatgtggctgctgaggcggtgactgggagcgggaagacg
ctcgctttcgtcatccccatcatagagctgctgctgaagagagaagagaagctgaagaag
atgcaggttggcgctctggtgatcacgcccacaagagagctggcccttcagatcagtgaa
gtgatggagatgttcattcagaagttcccacagtttacccagattttgctgattggtggc
accaacccgatagacgatgtggagaagttcaaagataaaggggcacacattgtgattgcg
acaccgggccgtctggaggacatgttcaggaggaaagcagacggtctggacttggccagc
tcagtgaggagtctggatgttctggttctggacgaggccgaccgactgctggacatgggt
ttcgaggccagtctgaacaccatcctgggtcacctgcccaaacagagacggacgggcttg
ttttcagccactcaaactcaggagctggagaagctggtgagggccggcctcaggaacccg
gtacgcatcacagtgaaggagaagggcgtggcggcctccgccgtcgcccagaaaacaccg
tccaggctctgcaactactacaccgtgaaaacggagaacaagttcaacaacctagtggcg
tttatacggcaacacaagcaggagaagcatctgatcttcttcagatgttttattgtggtt
tttattttttgtgtctttgtcttcagtgcgtttgtgcatcgatgtggacgtacagctcgt
atcggcaatcatggcaacgccctcgtcttcctgctgccaatggaggaatcctacgtcaac
tttctgtccatcaaccagaaatgtcccctccagaagctggtcctcacaggtgaggtcgtg
gacgtgctgcccaaagtgaaggccatgtctctggcggaccgagcgatgttcgaccgcggc
atgagagccttcgtgtcgtacgtccaggcctacgccaaacacgagtgcagcctcatcttc
aggctcaaagacctgaacttcgccaccttggcccgcggcttcgccctcctccgcatgccc
aagatgcccgagctgaaggggaagacgattcccggcttcaccaggacgacgctggacacg
gacaccatccgctacaaggacaagaaccgggagaagcagaggcagaagatgctcgccgag
ctgaaggagaaattgaagacgcctttacctaagaggaacttcatcaagaataaatcctgg
tccaaacagaagaccaagaaagaacgcaggaagaagagatccgccaagaggaagctcgag
gagggctccgacatagaggacgaagacatgaatgagcttttaaatgacactcgcatcctc
aagaggctcaagaaaggtcagatcagcgaggaggactttgagaagcagataacgagcgga
acaggaggagcaccgagggacggggagcagctgtga
DBGET
integrated database retrieval system
