Cebidichthys violaceus (monkeyface prickleback): 137868959
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Entry
137868959 CDS
T10484
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cve03021
]
137868959 (chd1)
03036 Chromosome and associated proteins [BR:
cve03036
]
137868959 (chd1)
Transcription machinery [BR:
cve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
137868959 (chd1)
Chromosome and associated proteins [BR:
cve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
137868959 (chd1)
SLIK complex
137868959 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
137868959
NCBI-ProteinID:
XP_068562123
LinkDB
All DBs
Position
Unknown
AA seq
1812 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSASGSSSSSSSSSSQSGSSDSGSGSDS
GSRSDSDREKSKEKMEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQQKRQ
SSSNSGSDEDSSSSDGSDSSSGSKRRRNSASSGSGSGSGSGSGSGSDSSAEDNSDETASD
YEPSHKIKSRKPPTKMNYRNGKKSSNQKKKSQKHSSSEDDDDSYKKGASAGQRRQATVNI
SYKEDEELKTDSDDLVEVLGEDVPQPEEDEFETLEKVMEGRIGRKRATGSVTTVYAVEAD
GDPNANFNSIKEPGEIQYLIKWKNWAHIHNTWETEESLKLQNVKGMKKLDNFKKKDQEKK
RWLKAASPEDIEYFNCQEELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSE
CSWEDGALIGRKFQKCIDDYMSRNQSKSIPSRDCKVLKQRPRFMPMKKQPSYIGGEGLEL
RDYQLDSLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLLNDHQLFGPFLLVVPLST
LTSWQREIQLWSPQMNVVVYLGDISSRNMIRTHEWIHVHSKRLKFNILLTTYEILLKDKS
FLGNVNWAFIGVDEAHRLKNDDSLLYKTMMDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFHSWELFEEAHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAI
QKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPDDIEFFSRAEALQ
QLIRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILADYLKSRQFLFQRLDGSIKGE
MRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI
GQKRQVNIYRLVTKSSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSAPFN
KEELSSILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKV
ANFSMMDEEEIDIDSERSHRSWDDIIPEEQRRRMEEEERQKELEEIYLLPRMRNCAKQTS
FNAGSGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKF
GGPLERLDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPEKTSGGRRGKVKGP
TFRISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIEWGKEDDSS
LLIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKR
EAQKQAGTANSRKRKPRSKKSKNPKPAKTDEVMKSTSSDPPSDKRSDDEEEIEEEKEVAP
VKVPSRRSRADRVVVLVKEEEEDDDDDDDDDEEEDEEPEQEEVSSSGEREVIEKEIKKEG
KKEKKEESWDIKETKEPKEKKETKPLEAVHKLEESMEKIEVKTEVRERTKKASDVPVHIT
ASGENVPVSEESEELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKI
GDHITECLKEYSNPDQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQN
TRSINTHGFKHADIERLKDNSHQDDSSRDSYSSDRHPPSGRYHESSSSKERHSSESHRKT
TAGESRKRPYSSFSNGKDHRDRDHYRPDSRDRDRDRQDRYYNDSKHRKLEEFRSSRDHRL
DVKDHSHSEHRSSYRYHSDWQAEQRASASGPRSPRDQRSPYDSRSPMGHRSPFDYSSDHK
STPEQIWSSRKT
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcgcagtgaggatgaaagtgtaagcaacagcagtggagaatcaagtaattct
gatgatgaatccggttctggatcgggctcagcatcaggctccgcctcaggctccagttcc
agctcctccagcagcagcagccaatcagggagcagtgactcaggtagtggctcagactct
ggcagccggtcagattctgacagagagaaatccaaggagaagatggaaccaccaaataag
tcaaacattgatggagctgagttctggaagtccaacccaagtatcctagcagtgcaaaga
tctgctatgctcagaaagcagcagcttcagcagcagcagcagcagcagcagaagagacaa
agctcctcaaatagtggatctgatgaggactcgtcaagtagcgatggatcggactcatcg
agtggatccaaaaggagaagaaattcagcctcctctggctccggatcgggctctggatct
gggagtggttctggatcagactcatcagcggaggacaacagtgacgaaacagcatcagac
tatgagcctagtcacaaaatcaaaagcaggaagcctccaacaaagatgaattatcggaat
gggaagaaaagcagcaaccagaagaagaaatcccagaagcattcttcctctgaggacgac
gatgatagctacaagaagggggcatctgcagggcaaaggcgacaggccactgtcaacatc
agctacaaggaggacgaggagctgaagaccgattccgacgacctggtggaagttctgggt
gaagatgtcccgcaacctgaggaagacgagtttgaaacactggagaaagtgatggaaggc
aggataggaaggaaaagagcaacaggaagtgtaaccactgtatacgctgtagaagcagac
ggggaccccaatgccaacttcaatagcatcaaggagcctggtgagatccagtatttaata
aagtggaagaactgggcccatatccacaacacttgggagacagaggagtcactcaagtta
cagaacgtcaagggcatgaagaaactggacaatttcaagaagaaggaccaggagaaaaag
agatggttaaaggcggcttcaccagaggatatagagtatttcaattgtcaggaagaattg
atggatgaccttcactctcagtaccagcttgtagagcgaatcataggacattcaaaccag
aagtcagcggctggttacccagactacctatgcaagtggcagggtttaccatactccgag
tgtagctgggaagacggcgctctgatcggcagaaagttccagaaatgcatcgacgactac
atgagcagaaaccagtccaagagcattccatccagagactgcaaggtgctcaaacagaga
cccaggtttatgcccatgaagaagcagccaagttacataggaggtgaaggactggagctc
cgagactaccagttggacagcttgaactggatggctcactcctggtgcaaaggcaacagt
tgcatccttgctgatgagatgggtttagggaagaccatccagacaatctccttcctcaac
tacctgttaaatgatcaccaactgtttggacccttcttgctggttgtgcctctctctaca
cttacctcctggcagagagaaatccagctctggtctcctcagatgaatgttgtggtctat
ctgggagacatcagcagcaggaatatgatcaggacacatgagtggatccacgtccatagc
aagagactcaagtttaacatccttctcacaacatatgagattcttctcaaagacaagtca
tttttgggcaatgttaactgggccttcattggtgtggatgaggcgcaccgactgaagaat
gatgactccctcctctacaagaccatgatggacttcaagtccaatcacaggcttctgatc
acaggaacgccactgcagaactccctgaaagagctctggtctctgctgcacttcattatg
cccgagaagtttcactcttgggagctgttcgaggaggcgcatggtaaaggcagggactcg
ggctacaccagtttgcacaaagagctggaaccttttttactgcgccgagtcaagaaggat
gtggagaaatctcttcctgccaaagtggagcagatcctcagagtggagatgagcgctatc
cagaaacagtattacaaatggatcctgaccaggaactataaggctctgagtaaaggtacc
aaaggcagcacgtcaggcttcctgaacatcatgatggagctgaagaagtgttgtaaccac
tgttacctgattaagcccccagatgacattgagttctttagcagagctgaagccttacag
caactgatccgcagcagtgggaagctggttctgttggacaaactgctggtgcgtttgaag
gagcgaggccacagagttctcatcttctcccagatggtacggatgctggatatcctggct
gattacctgaagagccgacagttcctctttcagagattagatggctccatcaaaggggag
atgaggaagcaggcgttggatcattttaatgccgagggctcagaggatttttgcttcttg
ttatcaacgcgtgctggtggtctgggtatcaatctcgcatcagctgacacggtagtcatc
tttgactcggactggaacccccagaatgatctccaggcccaggccagagcccacaggatc
ggacagaaaagacaggtgaatatataccgtttggtgacgaagagctcggtggaggaggaa
atcattgagagggcgaagaagaaaatggtgctggatcaccttgtcatccagaggatggac
actacagggaaaactgtcctccacaccggtgctgctccctccagttcagcaccattcaac
aaggaggagctgtcttccatcctgaagtttggtgctgaggagcttttcaaagagccagag
ggtgaggagcaggagcctcaggaaatggacattgacgagatcctcaaaagagctgagacc
agggaaaatgatcctggaccctccacagtgggagaagaactgctgtctcagttcaaggtg
gccaacttctccatgatggacgaagaggaaatagacatcgactctgagcgtagtcatcgg
agttgggacgacatcattcccgaggagcagaggaggaggatggaggaggaggagagacag
aaggagctagaggaaatctacttgctgccacgcatgaggaattgtgccaaacagacgagc
tttaacgccggttcgggacggcagagcaggaacaggaggtactctgggtctgacagcgac
tccccgtcagaccgaaaaaggccaaagaaacgaggacggcctcggaccattccacgagaa
aatatcaagggcttcagcgacgctgagattcggaggtttgtcaagagttacaaaaaattt
ggaggaccactggagaggttggatgctattgctcgtgatgctgaacttgtggataagtct
gaacatgatctgaaacgcttagcagagaccgttcacaacggctgtgtgagaacactacga
gaaaacccatgtggaccagagaagacttcaggaggcaggagagggaaggtgaagggccct
acattcaggatctctggagtccaggtgaatgccaagctcgttatctcccacgaggaagag
ttggctccactccacaaggccattcctgctgaccccgaggagagaaagaagtatatgatt
ccatgccactcgaaggcagcacactttgacattgagtgggggaaggaggacgactccagc
ctcctcataggaatctatgagtacggttatggcagctgggagatgatcaagatggatccg
gacctcaatctcacacacaagctcctaccagacgaccctgacaagaagccacaggccaaa
cagctccagaccagagcagactacctcatcaagttgctaagcaaggacctggccaaaaga
gaagcacagaaacaagcagggacagctaattcacggaagaggaaaccaagaagtaaaaag
agcaaaaatccgaagcctgctaagacagacgaagtgatgaagagcacgtcctcagatccc
ccgtcagacaagaggtcggacgacgaggaggaaattgaggaggaaaaggaggtggcacca
gtgaaggtgccgagcagacggagccgagcagacagggtggtggtgttggtgaaggaggag
gaggaggacgacgacgacgacgacgacgacgacgaagaagaagatgaggagcctgaacag
gaggaggtttcttcatcaggggagagggaggtcatagaaaaagagatcaaaaaagagggc
aagaaggagaagaaggaggaaagttgggacattaaagagacaaaggagccaaaagagaaa
aaagaaacaaagcctctggaagcggtacataaactggaggagagcatggaaaagatcgaa
gtaaagactgaggtacgagaacgaacaaagaaagcctctgatgtgccggtccatattaca
gcaagtggggagaatgtgccagtatctgaggagtctgaggaactggaccagaggaccttt
agtgtgtgcaaagagaggatgcggccggtgaaagcggccctgaagcagctggacagaccg
gagaaagggctgtcggagcgcgagcagctcgaacatacaagacagtgcctcatcaagatt
ggagaccacatcactgagtgtctgaaggagtattccaatcctgaccagatcaaacagtgg
agaaaaaacctgtggatatttgtttccaaattcactgagtttgacgccaggaaactacat
aaactgtataagcacgcaatcaagaaacgacaagagaacgcccaggcaatggagcagaac
actagaagtataaacacccacggctttaagcatgcagatattgaaaggctgaaggacaac
tcgcaccaggacgatagcagcagggacagctacagctccgacaggcatccgccttcaggt
cgataccacgagagcagcagcagtaaggagagacacagctcggagtcccacaggaagacc
acagcaggggaatccaggaaaagaccgtactcatccttcagcaacggcaaagaccaccga
gaccgagaccactacagaccagacagcagagacagggacagagacagacaggacagatac
tacaatgacagcaagcacaggaagctggaggagttccgctccagcagagaccaccggctg
gacgtgaaggaccattcccactcggagcaccgctcctcctaccgctaccactcagactgg
caggcggagcagcgggcctcggccagcgggccccgctccccccgggaccagcgctcgccc
tatgactcccgctcgcccatgggacaccgctcgcctttcgactactcgtcggaccacaag
agcacaccagagcagatctggagcagccgcaagacataa
DBGET
integrated database retrieval system
