Cebidichthys violaceus (monkeyface prickleback): 137869255
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Entry
137869255 CDS
T10484
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cve03019
]
137869255
03041 Spliceosome [BR:
cve03041
]
137869255
Messenger RNA biogenesis [BR:
cve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
137869255
Spliceosome [BR:
cve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
137869255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_Nup35
Calcipressin
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
137869255
NCBI-ProteinID:
XP_068562624
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEYRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETPNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQMPQQNTVSFAAQP
YSQWGQWYSNTAAAQQIGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNG
AMVEPGQGVNGAVLTNTAGMSTAGYHTH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccagcctaaaaccctgtatgtggggaatctgtcccgggacgtgacggag
gccctcatcctggagttgtttggccagattggaccctgcaagagctgtaaaatgatagta
gatacggcaggtcacgacccgtactgctttgtggagttctatgagtatagacatgccact
gccacaatcgcagccatgaacggtcggaaaatactgggtaaggaggtcaaagtcaactgg
gcaacgacgccaaccagccaaaagaaagacacgagtagtcacttccacgtctttgttgga
gatttaagtcctgaaatcaccacagatgacataaaagcagcttttgctccatttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcggaaaacgccatccagcagatgggaggccagtgg
ttgggaggaaggcagatcagaaccaactgggccacaaggaagcccgcccctaaaactacc
aacgagacacccaacaccaagcagctatcttttgacgaggtggtgaaccagtccagcccc
agcaactgcaccgtctactgcgggggggtcactacgggcctcacagagcaaatcatgaga
cagaccttctcacctttcggccaaataatggaaatccgggttttccccgacaaaggctac
tcgtttgtgaggttcaactcccatgaagcagcagctcatgccatcgtgtccgtcaacggt
acgtccatagagggctacgtagtcaagtgttactggggcaaagaaacgacagacatggtt
agccccatccagcaggtacagatgccccagcagaacacggtgagcttcgcagcgcagccc
tacagtcagtggggtcagtggtacagcaacacggcggccgcccagcagatcggccagtac
gtgcccaacggatggcaggtgccgagctacggagtctacggacagacctgggatcagcag
ggctacaatcatttacatgccggtgccggatggacaggcgtgggcgccgtgagtaacggg
gccatggtggagcccggccagggagtcaacggggccgtgctcaccaacacggccggcatg
agcaccgccggctaccacacccactga
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