Cebidichthys violaceus (monkeyface prickleback): 137869400
Help
Entry
137869400 CDS
T10484
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137869400 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cve03041
]
137869400 (prpf4)
Spliceosome [BR:
cve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
137869400 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
NBCH_WD40
PRP4
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Ge1_WD40
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
WD40_like
DUF7779
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
137869400
NCBI-ProteinID:
XP_068562922
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MSDDEDLAPAPKRTRVYYGSLEEKERERLSSESRRGGDGVKAGIKAGNINISSGEYLELE
ERVSERQNDALAAFEQRRRARQITVSTDDAEVKAGLRALGEPITLFGEGPADRRERLRSV
LSVVGPDALKKSRRDEEKAKRSQDECQQTWYHEGSASLKDARLWLAKYSLPRAMKRLEAA
RAYREVPEATRAIRTQEQQNSLRNLNNFCSQIGDDRPISFCHFSPDSKMLATASWSGLCK
LWSVPDCSLIRTLRGHSTSVGAVVFRPQAGVSLDQSDVSLASCATDGSVKLWNLESDEPV
ADIEGHSDRVSRVSWHPSGRFLGTTSYDNSWRLWDLEVREEILHQEGHSKGVHDIHFHPD
GSLAATGGLDAFGRVWDLRTGRCIVFLEGHLREIYSVHFSPNGYHLATGSGDNTCKVWEL
RNRKCLYTVPAHQNLLSSVRFQPTDGHFLLTGAYDNTAKVWSHPGWTPLKTLAGHEGKVM
GVDVSPDGKLIATCSYDRTFKLWLSE
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatgaggacttggctccggccccgaagaggactcgtgtttactacggcagt
ctggaggagaaagagcgcgagcgtctgagctcagagtcgaggcgggggggcgatggggtg
aaggccggcatcaaggcgggaaacatcaacatctcgtcaggagagtatctggagctggag
gagcgggtcagcgagcggcagaacgacgcgctcgccgccttcgagcagcgacggcgagcg
agacagatcaccgtctccacggacgacgccgaggtgaaggccggcctccgagcgctcgga
gagccaatcacgttgttcggagagggaccagctgaccgccgggagagactgcgcagtgtt
ctgtctgttgtcggtccggacgctctgaagaagtccaggagagacgaagagaaagccaag
agatcacaggacgagtgccagcagacgtggtaccacgaaggctccgcctccctgaaggac
gctcgcctctggttggccaaatactctctgccacgggcgatgaagcgtctggaggctgcg
cgcgcttacagggaagttcccgaagcgacgagggcgatccggactcaagagcagcaaaac
agtctgaggaatctgaacaacttctgcagtcagatcggagacgatcgaccaatcagcttc
tgccacttcagccccgactccaagatgttggccaccgcctcctggagtggcctgtgtaag
ctgtggtccgtccccgactgcagcctgattcgtacactcagaggacacagcaccagcgtc
ggtgcggtcgtcttccgcccgcaggccggagtctctctcgaccaatcagacgtcagcttg
gcctcctgtgcgaccgacgggtccgtgaagctgtggaacctagagagtgacgaaccggtg
gctgacatcgagggtcacagcgaccgggtgtctcgggtgtcgtggcacccttctgggagg
tttctgggaacaaccagttatgacaactcgtggcgtctgtgggatctggaggttcgggag
gaaatcctccatcaggagggtcacagtaaaggagtccacgacatccacttccaccctgac
gggtctctggctgctactggaggcctggatgccttcggtagagtgtgggaccttcggacc
ggacgctgcatcgtgttcctggagggacacctgagggagatctacagcgtccacttctca
cccaacgggtatcacctggcgacaggaagtggtgacaacacctgtaaggtttgggagctg
agaaacaggaagtgtctgtacacagtccccgcccaccagaacctgctgtcctctgtccgc
ttccaacccacagacggtcacttcctgttgaccggagcttacgacaacacggcgaaggtc
tggagtcacccgggctggacgccgctgaagacgctcgccggacacgaggggaaggtgatg
ggcgtcgacgtgtctcctgacgggaaactgatcgccacctgctcctacgaccgcaccttc
aaactgtggctgtctgagtga
DBGET
integrated database retrieval system
