KEGG   Cebidichthys violaceus (monkeyface prickleback): 137870111
Entry
137870111         CDS       T10484                                 
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
cve  Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03018  RNA degradation
cve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137870111 (lsm7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137870111 (lsm7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cve03019]
    137870111 (lsm7)
   03041 Spliceosome [BR:cve03041]
    137870111 (lsm7)
Messenger RNA biogenesis [BR:cve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     137870111 (lsm7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     137870111 (lsm7)
Spliceosome [BR:cve03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    137870111 (lsm7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 137870111
NCBI-ProteinID: XP_068563219
LinkDB
Position
Unknown
AA seq 103 aa
MADKEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVQQQDG
NT seq 312 nt   +upstreamnt  +downstreamnt
atggcggataaagaaaagaagaagaaggagagcatcttcgacttgtcaaagtacatcgac
aagcccattcgtgtgaagtttcaaggaggacgagaggccagcggtgtcctgaagggtttt
gatcccctgttgaacctggtgttggacggcacaatcgagtacatgcgtgatccagatgac
cagctgaagctgacagaagacaccaggcagctggggctggtggtctgcagaggaacctcc
gtcgtgctaatctgtccccaggacggcatggaggctataccaaacccgttcgtacagcaa
caggacggctaa

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