Cebidichthys violaceus (monkeyface prickleback): 137870643
Help
Entry
137870643 CDS
T10484
Symbol
pdzrn3b
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cve04121
]
137870643 (pdzrn3b)
Enzymes [BR:
cve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137870643 (pdzrn3b)
Ubiquitin system [BR:
cve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
137870643 (pdzrn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
137870643
NCBI-ProteinID:
XP_068564129
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MGCSLCTLQKPEEHYKLLYEVCQVNGKDLSKATHDQAVEAFRTAKEPIVVQVLRRAPHPK
EVGPAGDAQVSDISTQTDITLQHIMALTKLSPSSPPMTELEEYLLPEEHPPHPYFDPNDF
LEVMQQDIEREELEYEEVDLYRANIQDKLGLTICYRTDDEDEAGIYISEIDPNSIAARDG
RIREGDKIIQINGIEIQNREDAVALLTSEGNQNISLLVARPEIQLDEGWMDDDRNDFLDD
LHMDMLEQQHHQAMQFTASMLQQKKHEEDGGTTDTATLLSNHHEKDSGVGRTDESTRNDE
SSEQENLGDDQTTASNTLGSCRKLTYSQDTLGSGDLPFSSESFISADYADADFLGIPADE
CERFRELLELKCQMRNSGAQGLYYQGVAGQDQEGVDKELEMLNEELRTIELECLNIVRAH
KMQQLREQCRESWMLHNSGFRNYNTSIDAGRHELSDITELPEKSDKDSSSAYNTGESCRS
TPLTLELSPDNSLRREAENQGPAGPSGSAGSNGKVLKPLTSPVQEASGPSRSRGSTKDPD
GAPPAESKERKQHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCRDPIGP
GDLEPKMEWKVKIRSDGTRYITKRPVRDKLLRERALRIHAERSGMTTDDDAISELKMGRY
WSKEERKQHAVRSKEQRQRREFMKQSRADCLKEQSGPEDRREPNIIELSHKKMMKKRNKK
IFDNWMTIQELLTHGTKSPDGTRVYNSLLSVTTV
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcagcctctgtaccctgcagaagcccgaggagcattataaacttctctatgaa
gtctgccaggtcaacggcaaggacctctccaaggccacccacgaccaggcggtggaggcc
ttccgcaccgccaaggagcccatcgtggtccaggtcctgcgccgagccccgcatcccaaa
gaggtcggccccgctggtgacgcccaggtctcggacatcagcacgcagacggacatcacc
ctccagcacatcatggccctcacaaagctctccccctcttcaccccccatgacggagctg
gaggagtatctgctgccggaggagcatcctccacatccatactttgaccccaacgacttc
ctggaggtgatgcagcaggacatagagcgcgaggagctggaatatgaggaagtggattta
taccgagccaacatccaagacaagctgggcctgacgatctgctacaggaccgatgatgag
gacgaggctgggatctacattagtgagattgatccaaacagcatcgccgcgagggacggc
aggattagagaaggggacaaaatcattcagatcaatggtattgagatccagaaccgggag
gatgctgtagcgctgctgaccagtgaggggaaccagaatatctctctgctggtggccaga
ccagagatccagctggacgagggctggatggatgatgacaggaacgacttcctggatgac
ctccacatggacatgctggagcagcagcaccatcaggccatgcagttcaccgccagcatg
ctgcagcagaagaagcacgaggaggacggcggcaccacggacacggccaccctgctgtcc
aaccaccacgagaaggacagcggcgtcggtcgcacggacgagagcacgcggaacgacgag
agctcggagcaggagaacctcggcgacgaccagaccacggcctccaacacgctgggcagc
tgccgaaagctcacctacagccaggacaccctcggcagcggagacctgcccttcagcagc
gagtccttcatctccgcggactacgccgacgccgacttcctgggcatcccggccgacgag
tgcgagcgcttcagggaactcctggagctgaagtgccagatgaggaacagcggggcccag
ggtctttactaccagggcgtagcaggtcaggaccaagagggcgtggacaaggagctggag
atgctcaacgaggagctgcgcaccatcgagctggagtgcttgaacatcgtgcgcgctcac
aagatgcagcagctgagggagcagtgccgcgagtcctggatgctccacaacagcggcttc
cgcaactacaacaccagcatcgacgcgggccgccacgagctctcggacatcacggagctg
ccggagaaatcggacaaagacagctccagcgcgtacaacaccggcgagagctgccgcagc
acccctctcacgttggagctgtctccagacaactcgctccgacgagaagcagagaatcag
ggtccggctggaccgtcgggctccgccggctctaacggcaaggtcctgaaacctctcacg
tcccccgtccaagaggccagcggccccagccggagcagaggctccaccaaggatccagat
ggagccccgccggcagagagcaaggagcggaagcaacattcgccgtacaagcatgcccac
atccccgcccacgcccagcactaccagagctacatgcagctgatccagcagaaatccgcc
gtggagtacgcccagagccagatgagtctggtcagcatgtgccgggaccccatcggcccc
ggcgacctggagcccaagatggagtggaaggtgaagatccgcagcgacggcacgcgctac
atcaccaagcggcccgtgcgggacaagctgctgagggagcgcgccctgcgcatccacgcc
gagcgcagcggcatgaccacggacgacgacgccatcagcgagctgaagatgggccgctac
tggagcaaggaggagcgcaagcagcacgcggtccgctccaaagagcagaggcagcggcgc
gagttcatgaagcagagccgagcggactgcctgaaggagcagtcgggcccggaggacagg
agggagcccaacatcatcgaactcagccacaaaaagatgatgaaaaagagaaataagaaa
atatttgacaactggatgaccatccaggaactgctgacccacggtaccaagtcaccagat
ggcacaagggtttacaactcactcctgtctgtgaccacggtgtaa
DBGET
integrated database retrieval system
