Cebidichthys violaceus (monkeyface prickleback): 137870695
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Entry
137870695 CDS
T10484
Symbol
col4a6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04382
Cornified envelope formation
cve04510
Focal adhesion
cve04512
ECM-receptor interaction
cve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137870695 (col4a6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137870695 (col4a6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137870695 (col4a6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137870695 (col4a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cve04147
]
137870695 (col4a6)
00536 Glycosaminoglycan binding proteins [BR:
cve00536
]
137870695 (col4a6)
Exosome [BR:
cve04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137870695 (col4a6)
Glycosaminoglycan binding proteins [BR:
cve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137870695 (col4a6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
137870695
NCBI-ProteinID:
XP_068564207
LinkDB
All DBs
Position
Unknown
AA seq
1605 aa
AA seq
DB search
MGVPGFQGTDGVPGHPGQDGGRGPSGVDGCNGTRGEPGAPGYGTGGPGSPGFAGPYGPKG
QKGEPRFISDNGLTSLPGLQGRDGQPGIRGPDGAPGFPGPRGPEGFSGPPGPPGPPGPMG
SRSDGFEGEKGDKGDVGLPGPSGTPGDGSLRSEQTLTIYKGDKGAPGPKGIRGFPGTPGR
PGPFGYRGELGEKGIPGYPGARGPPGFNGPPGPPGQQGYVGTPGFSGPPGYTGAKGDQGD
PGAPGPPAYVSGQGTAIQGLTGDPGLSGLPGAPGDQGFPGYPGPPGQPGVGGFGTGGSGS
SGFPGTPGPKGEKGNPGVPGYGFEGGPGNPGPPGPPGPPGPQGPTSFSVEPCVIYPEWSG
PKGGPGSLPNTLPGEPGPPGPIGAPGERGYNGYRGDPGDCNCLGGGTSGLPGLAGAPGAN
GNPGFAGRKGEPGDGGSPGFNGVQGPPGRAGESGYFGRKGEKGTSYYPNLGLGVKGEIGG
TGPRGPTGETGTPGRDGTPGYPGSPGPPGDGGYGTIGEKGFPGFPGSKGRPGGPGEPGIG
YAGTPGFRGEPGDPGQPGFPGQPGLPGPKGQVLPCSIPGEAGDPGYPGVPGRPGLKGEPG
FPGNTGRPGFDGGKGEIGDPGSGGRPGPQGFPGPRGDPGLPGSPGQSFDGGRAKDGVPGR
PGAKGQPGEVLGATPGGPGQNGLPGIPGDKGQPGTPGGPGTPGGDGRFGVPGLKGERGID
GFPGIPGLPGLPGEPTFSIPGRPGSPGGSGLSGSPGFPGRKGERGDPGFPGPAGMKGTPG
QPGTPGSPGSRGPPGPPGPGTRDGIPGIPGRKGERGFPGLTGFPGLPGRPGSPGFPGVKG
EAAGPGRDGLPGGPGFPGPKGERGYPGSPGLPAPPRRQELVERGEPGTPGGGGLPGFPGP
RGDKGLPGTPGRQGLPGLPGYAEQSKGQPGQPGFPGQPGSPGYPGPKGEAGIMGFPGMSG
PRGDDGAPGFPGNPGEFGRPGGKGAPGETFGYPGGPGAKGQPGEPGFPGGRAIDGAPGDN
GFPGGPGFPGAKGVPGEGGRPGIMGSFGFPGPKGQPGYPGRRGEDGTPGLPAGPGSPGAK
GLPGPPGLDGLNGLGGPKGLPGTPGGSVGGRPGSPGAPGFKGERGVSYPGSPGYPGPKGE
RGDSGGPGGVGFPGLPGPPGPTFGSNVPGPSGDPGLPGLDGEYGFQGPSGPPGPPGPGTA
QGDRGDSGLPGFPGSPGRKGDPGIPGGPGLPGGSNFKGGRGETGYSGGPGLKGFPGDPGY
YGNKGPKGIRGRQGRKGIPGVALPPIPPPSRIYGEMGFPGAAGGSGGPGEPGQPGIPGRP
GPKGRPGPVGKLGRTGSSGFPGPIGDAGPPGFPGSTGEQGPTGAVGRPGSPGGVGRSSSI
GYTLVKHSQNAQVPMCPQGMATLWDGYSLLFVEGQEKAHNQDLGQPGSCLPRFSTIPFLY
CSPNEVCYYASRNDKSYWLSTTAPIPMMPVAEQQIQPYISRCSVCEAPSQPVAVHSQDMT
IPTCPPGWRSLWIGYSFLMHTAAGAEGGGQSLQSPGSCLEDFRATPFIECNGAKGSCHFF
ANEYSFWLTTVEPSQEFVYSPAQETLKGGQERSRVSRCQVCSKIL
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccggggttccaaggaacagatggagtacctggtcacccgggtcaggacggt
ggacggggaccatcaggagtggacggatgtaacgggaccagaggagaacctggagcgccc
ggctacgggaccggaggacctggatcccctggatttgctgggccttatgggccaaagggt
cagaaaggagagcctcgcttcatctctgataacggtctcacgagtttaccaggtttgcaa
ggacgagacggtcaacctggcatcagaggtcctgacggtgcacctggttttcctggtccg
agggggccggagggattctccggcccgcctggtcctcccggtcctccagggccgatgggg
agccgtagtgacggatttgaaggagagaaaggagacaagggcgacgtgggtcttcccgga
cccagcggtactcccggcgacgggtcgctaagaagcgaacaaactctcactatctacaaa
ggagataagggtgcgcctggaccgaaggggatcagagggttccccggcactcccggcaga
cctggaccgttcggctatcgtggtgaacttggagagaagggcattcctggataccccggt
gccagaggtcctcctggttttaacgggccccccggacctccaggacaacagggatacgta
ggtactccaggtttctcgggtcccccaggatacacaggagcaaagggagaccagggcgac
cccggagcaccaggacctcctgcttacgttagtggtcagggcactgctattcaaggacta
acaggtgacccgggtctcagtggcctgcccggtgcccccggtgaccagggattcccagga
tacccgggtccaccaggccaaccaggagttggtggttttggcacaggtggctccggatcc
tcaggttttcccgggacccccggcccaaagggagagaaaggtaacccaggtgtaccaggc
tacggcttcgaaggaggccccggcaaccctggaccccccggaccccccggccctcctgga
cctcagggccctacgagcttttccgttgaaccctgcgtcatctatcctgagtggtccggg
cccaaaggtggtcccggtagtctccccaatactctccctggagagcctggacctccaggc
cccataggagcgccgggtgaaagaggatacaatggctacagaggtgatcccggcgactgt
aactgcctcggaggaggaacctcagggttgcctgggttagctggagccccgggagccaac
ggcaaccccggcttcgctggacgaaagggggagcccggtgacggcggctcgcccggcttt
aatggcgtccagggacctcctggtcgtgctggtgaaagcggttactttggtcgtaaggga
gagaaggggacgtcttactaccccaacctgggtttaggggtgaaaggagagatcggaggc
actggacccagaggaccgacgggtgaaaccggaacacccggcagagacggaacgcccggc
taccccggatcccccggacccccgggcgacggcggctacggcacaattggagagaaaggt
ttcccggggttccccgggtcaaagggtcgtcccggcggccccggcgagcccggtatcggc
tacgccggcacgcccggctttcgcggagaacccggagaccccgggcaaccaggtttcccc
gggcaaccaggtttacccggaccgaaaggccaagtgctgccttgctccatacccggcgag
gccggagaccccggttaccccggcgttcctggacgaccaggtcttaaaggtgagccaggt
ttcccagggaacacgggacgtcccgggtttgacggtggcaaaggagaaatcggagacccc
ggttctggaggccgacctggaccacaaggtttccccggacccagaggggatcctggactt
ccaggttctccgggacagagttttgacggaggcagggcgaaggacggcgtcccggggcgt
cctggggccaaaggtcagcccggagaggtactgggagccacgcccggtgggcccggacag
aacggtttgccaggaatccccggagacaagggccagcccgggacgccgggaggacctgga
acacctggtggcgacggacgcttcggcgttcccggactgaagggagagcgcggcattgac
gggtttcccggtattcccggccttcccggacttccaggcgagccgactttcagcattccc
ggtcggcccggatctcctggcggcagcgggctgagcggatcaccaggtttccccggtcgc
aagggggaaagaggagacccgggtttcccggggccggcaggaatgaagggaaccccagga
cagcccggcacccctggatcaccggggtctaggggaccccctggacctccaggaccagga
actagagatggaatcccaggaatcccaggaaggaagggtgagcgaggtttcccaggactg
acaggtttccctggactaccgggtcgaccaggaagcccagggtttcccggagtgaaaggg
gaggccgcaggccccggaagagacggactccccggcggtcccggattccccggaccgaaa
ggtgagagaggataccccggtagccccggcttgcccgctcctcctcgccgacaagagctt
gtggaaagaggtgaacccggaacacctggaggcggcggccttcctggcttccccggaccc
agaggtgacaaaggtctgccaggtacgcctggtcgtcagggtctgcccggacttcccggt
tacgctgagcagagtaaaggacagccgggacagcctgggttccccgggcagccgggaagt
ccaggttaccccgggccgaagggagaagctggaatcatgggattccccggcatgtcagga
ccacggggtgatgacggtgcacctggttttcctggcaaccctggagaatttggtcgtccc
ggtggaaaaggtgcacccggagaaacttttggttatcctggaggtccaggagctaaaggc
cagccaggagagccaggcttcccaggtggccgcgccatcgacggcgcccccggtgacaac
ggctttccgggaggtccaggtttccctggagcgaagggagttcctggtgaaggagggcgg
cctggaataatgggctcctttggtttccccgggcccaagggccagcccggctacccggga
agaagaggagaagatggtactcctggtctgcctgcaggtcctggaagtcctggagccaaa
ggtttgcccggaccccctggtttggacggacttaatggccttggtggacctaaaggcctc
cctggaaccccaggtgggagtgtaggaggtcgcccaggttcccctggtgctccaggtttt
aagggggagagaggagtctcctatccaggaagtccaggctaccccggaccgaagggagag
agaggagattcaggtggtcctggaggcgtagggttccctggtctgcccggacctcctggt
cccactttcgggtcgaatgttcccggaccttctggagaccccggtctccctggactggat
ggagagtatggtttccaaggtccttcaggtcctcccggtccgcctggtccaggcacagcc
cagggagacagaggtgactctgggctcccgggcttccccggctcccccggcaggaaagga
gacccaggcatccccggaggacccggactccccggcggctccaacttcaaaggaggacga
ggtgagaccggctacagcggaggtcccggtctcaagggtttccccggtgaccctggttat
tatggtaacaaaggacccaagggaatacgaggccgtcagggtcgtaagggtatcccagga
gtcgcgctgcccccgataccccccccctcgagaatctacggagaaatgggtttccccggt
gcggccggcggctccggtggccccggagaacctggtcagcctggaattcctggacgccca
ggtcctaagggtcgtcccggtcctgtgggtaaacttggcaggaccggatcttctggtttt
cccggacctatcggcgacgccggaccccccggtttccccggatccactggagaacaaggt
cccaccggtgcggtcggtcgtcccggctctcccggcggcgtcggccgcagctccagcatc
ggctacactctggtgaagcacagccagaacgcccaggttcccatgtgtcctcagggcatg
gccacgctgtgggacgggtacagcctgctgttcgtggagggacaggagaaggcgcacaac
caggacctcggtcagccggggtcctgcctccccaggttcagcaccatccccttcctctac
tgctcccccaacgaggtgtgctactacgccagccgcaacgacaagtcctactggctctcc
acaaccgcacccatacccatgatgcccgtggccgagcagcagatacaaccttacatcagc
aggtgttctgtgtgtgaggctccgtctcaacctgtggcggtccacagtcaggacatgacc
atccccacctgtcctcccggctggaggagtctctggataggatactccttcctcatgcac
acggcagccggcgctgagggcggcggtcagtccctgcagtctcccggctcctgcctggag
gatttccgcgcgacgccgttcatcgagtgcaacggcgccaagggcagctgccacttcttc
gccaacgagtacagcttctggctcaccaccgtggagcccagccaggagttcgtctactcg
ccggcgcaggagaccctgaaggggggccaggagcgctccagagtcagccgctgccaagtc
tgcagcaagatcttgtag
DBGET
integrated database retrieval system
