Cebidichthys violaceus (monkeyface prickleback): 137871164
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Entry
137871164 CDS
T10484
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cve03041
]
137871164 (ddx1)
03016 Transfer RNA biogenesis [BR:
cve03016
]
137871164 (ddx1)
Enzymes [BR:
cve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137871164 (ddx1)
Spliceosome [BR:
cve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
137871164 (ddx1)
Transfer RNA biogenesis [BR:
cve03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
137871164 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
137871164
NCBI-ProteinID:
XP_068564917
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEELDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQVVYETLKDQQEGKRGKASIKTGGAIFNSWQMNPYDRSAAFAIGADGLCCQSREFKEWH
GCRSTKGVTKGKYYYEVTCHDQGLCRIGWSTSQAALDLGTDKYGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYLDLDKGQISFSKNGNDLGVAFEIPQNVQTQPFFASCVLKNAELKF
NFGGEDFKNAPRSGFVALDQASEGHTVKSSQAGSAKVSQAKASSNAPKALILEPSKELAE
QTLNNVKQCGKYVDNPKLRNLLVIGGVAAKDQLAALEQGIDIVVGTPGRLDDLISTGKLS
LSQVRFLVLDECDGLLSAGYTDFINRVHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
RIMHFPTWVDLKGEDSVPESVHHVVVPVNPKNDRLWERLGKNHIRTDEVHAKDNTRPGAN
SAEMWSEAIKMLKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDSKSHQL
SCVCLHGDRKPNERKTNLERFKKKEVRLLVCTDVAARGIDVHGVPFVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAMEKEKVWYHVCANRGRGCYNTRLKEDGGCTIWYNEKELLS
DVEEHLKCTITQCEPDIKVPVDDFDGKVTYGQRKALGGGNYKGHVEALAPTVQELATLER
EAQSSFLHLGYMPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttttctgaaatgggcgttatgcctgaaatcgcgcaggctgtggaggagctg
gactggcttctacctactgacatccaggcagagtctatcccccttattctcggtggagga
gatgtactcatggcagcagagactggtagcggtaaaacaggggccttcagtatcccagtg
atccaggtcgtgtatgagaccctgaaggatcagcaggagggcaagaggggcaaagcctcc
atcaagactggaggagctattttcaacagttggcagatgaacccttatgaccgcagtgca
gcctttgcgattggtgcagatggtctgtgctgccagagcagggagtttaaagagtggcac
ggctgtcgctctactaaaggggtcaccaaagggaagtactactatgaggtgacctgccat
gaccagggtttgtgtcgcatcggctggtccaccagccaggcagccctggacttgggcact
gataagtatggttttggttttggtgggactgggaagaaatccaacaacaagcagtttgac
agctatggagaggagtttaccatgcatgacactattggatgctacttggacctagacaag
ggccagatttccttctctaaaaatggcaatgacctgggtgtggcttttgagataccacaa
aatgtgcagactcagcccttctttgcctcctgtgtgctcaagaatgcggagctgaagttc
aactttggaggagaagactttaaaaatgcccctaggagtgggttcgttgctttggatcag
gcctcagagggccacacagtcaaatcttctcaagcaggcagtgccaaagtgagtcaggcg
aaagcgtcgtccaacgcccccaaagcactgatcctggagccgtcgaaagaattggccgaa
caaaccctcaacaatgtcaagcagtgtggaaaatacgtggacaaccccaaactcaggaac
ctgctggtgattggtggcgtggctgccaaagaccagctggctgctctggaacaggggatt
gacattgtggtgggaacaccaggaagactggacgacctcatatccactgggaagctcagt
ctgtcccaagtccgcttcctagtcctggatgagtgtgacggcctactgtccgcaggctac
acagactttatcaacagggtccataaccaaatccctcaggtcacttctgacggcaaaaga
ctgcaggtgatcgtgtgttcagccacgctgcactcgtttgacgtgaagaagctgtctgag
cgtatcatgcactttcccacttgggtggacctgaagggggaggactctgtccccgagagt
gtccaccacgttgtagtgcctgtcaatccgaagaacgatcgcctctgggagcgcctcggc
aagaaccacatccggaccgatgaagtccacgccaaagataacaccagaccaggagccaat
tctgcagaaatgtggtcggaagccatcaagatgctgaagggcgagtacacggtgagggcc
atcaaagagcacaagatggaccaggccatcatcttctgccgcaccaagatcgactgtgac
aacatggagcagtacttcatccagcaaggaggaggtccagacagtaaaagccaccagctc
tcctgtgtctgtctgcatggggatcgtaagccgaacgagaggaaaactaacttggagcgc
ttcaagaaaaaagaagtgaggctgttggtctgcacagacgtagctgccagaggaatcgac
gtccacggagttccttttgtgattaacgtcaccctgccagacgagaagcagaactacgtc
catcgtattggaagagttggacgagccgagagaatgggactggccatctccttggttgca
atggagaaggagaaggtgtggtaccacgtttgcgcgaaccgaggcagaggctgctacaac
acccggctgaaggaggacggaggttgcaccatctggtacaacgagaaagagctcctgtca
gatgtcgaggagcatctaaagtgcaccatcacccagtgtgagccagacatcaaagtaccc
gtcgatgatttcgatggaaaggtcacctatggtcagcgcaaggctttgggaggtggtaac
tacaagggccacgtggaagctctggccccgacggtccaggagctggcgaccctcgagaga
gaagcccagtcttccttcctccacctgggttacatgccgaaccagcttttcagagccttc
tga
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