Cebidichthys violaceus (monkeyface prickleback): 137871216
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Entry
137871216 CDS
T10484
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04140
Autophagy - animal
cve04148
Efferocytosis
cve05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137871216 (vps18)
04148 Efferocytosis
137871216 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
137871216 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cve04131
]
137871216 (vps18)
Membrane trafficking [BR:
cve04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137871216 (vps18)
Hops complex
137871216 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_11
zf-RING_Vps41
zf-RING_16
zf-RING_2
DUF1664
zf-RING_UBOX
LETM1_C
Apolipoprotein
zf_RING_Vps8
zf-ANAPC11
DUF5600
zf-rbx1
zf-C3H2C3
DUF4446
KNOX2
zf-RING_5
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
137871216
NCBI-ProteinID:
XP_068565031
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MASILDEYEDSQNTRQSAQQQQHSRLSTANIGITHSGFVNVRLEEEKPIFNKQRIDFTPP
ERINHLAVCNNQLCMSLGKDTLLRIDLAKPDQPNQIELGRKDESKVYRLFLDPTGSHLLI
CLSTSECLYLNRNTQKVRSLSRWRGHLIESVGWNKQLGSETNTGPVLVGTSQGIIFEAEI
SATEGSLFNTNPDQYFRQVHSLEEDGKPAPVCCLEVERGLENKYFIIATTRKRLFQFVGK
VAEGSEQQGFSSVFSQNHDLLPSFQEFPANMGYSEITFYTPKLRTSPKAFAWMMGNGVLY
GQLDYVRPDSLLSDVQVWEYTPDIDLSLNKPISIVLTQFHFLLLLHDRVKAICTLNGQVV
YEDVFPDKFGALKRMIKDPVGGLVWIYTEKAVFRYHIQREARDVWQMYMSMTKFDLAKEY
CRDRPECMDMVLAKEAEHCFQNKRYIESAKCYALTQNYFEEIALKFIEAKQEEALKEFLL
KKLSNLKPSERTQITLLVTWLAELYLNRLGQLESDGNSLVFQETRDEFRQFLSSSKHKEC
LFNNRSTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDDYSAALDVLSKHCDQKLF
YKFSPVLMQHIPKKVVDAWIQMGKRLDPKKLIPALMNYSQMGSTQQISETIRYMEFCVYE
LTVTEEAIHNYLLSLYAKYKPDSLLWYLEQAGTHASEIHYDLKYALRLCAENGYLRACVL
VYRIMELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMN
CLSSCDLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIEELKQEMEEATESAKRIRE
DIQEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLTAFKQSRL
EDLQKKLAATTQSTKSRHRPAPKDEGDTSSLGKGNAGTSREQIKSDMDDIIASECVYCGE
LMIKSIDKPFIDPQKFEEEKSSWL
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaattctcgatgagtacgaggactcgcaaaacaccaggcagagtgcgcagcag
cagcagcacagccgcttgtcaactgccaacatcgggataacacattcaggctttgtgaat
gtgagacttgaggaagagaagccgatattcaacaagcagaggatcgatttcacaccgccc
gagaggatcaaccatcttgcagtgtgcaacaatcagctgtgcatgagtctggggaaggac
accctgctgaggattgacttggccaagccagatcagcctaatcagattgaattaggaagg
aaagatgaaagtaaagtgtacagactgttcctggacccaaccggctcccatctgctgatc
tgcctgagcaccagtgagtgtctgtacctgaacaggaacacgcagaaggtgcgcagtctg
tcccgctggagaggccacctcatcgagagcgtgggctggaacaagcagctgggcagcgag
accaacacgggacccgtgctggtcggcaccagtcaaggcatcatcttcgaggcggagatc
tccgcaaccgagggcagcctgttcaacaccaatccggatcaatacttcagacaggtccac
tccctggaggaggacgggaagcctgcgccagtctgctgcctggaggtggagcggggcctg
gagaacaagtacttcatcatcgccaccacccgcaagcgcctgttccaatttgtgggtaag
gtggccgaggggtccgagcagcagggcttcagctctgtcttcagccagaaccacgacctg
ctgcccagcttccaggagttcccggccaacatgggctacagcgagatcaccttctacacc
ccgaagctccggacctccccaaaggcgttcgcctggatgatgggtaacggcgtcctctat
ggtcagctggactatgtcaggcctgattccctgctgagtgatgtgcaggtatgggagtac
acccctgacatagacctcagtctcaacaagcccatctccattgtgctgacgcagttccac
ttcctgctgctgctccacgaccgggttaaagccatctgcactctgaatggacaggtggtg
tacgaggatgtgttcccagataaatttggcgccctcaagaggatgatcaaggacccggtc
ggcgggttggtgtggatctacactgagaaggcagttttccggtaccacatccagcgcgag
gcccgggacgtctggcagatgtacatgagcatgactaaatttgacctggccaaggagtac
tgccgagaccgccccgagtgcatggacatggtgctcgccaaggaggccgagcactgcttc
cagaacaagcgatacatcgagagtgccaagtgctacgccctgacccagaactactttgag
gagatagcgctcaagttcatcgaagccaaacaagaggaagccctgaaggagttcctgctg
aagaagctgagcaatttgaaaccgagcgagagaacgcagatcaccctgctggtcacctgg
ctggccgagctctacctgaaccggctcggccagctggagagcgacggcaacagcctcgtc
ttccaggagacccgcgatgagtttcgccaattcctcagcagctccaagcataaggagtgc
ctgttcaacaaccgcagcacaatctacgacctgctggccagccacggcaacgtggacgac
atggtgtacttctcggtcgtcatgcaggactacgagagagtgatctcccactactgccag
cacgacgactacagcgccgctctggatgtgctctccaagcactgtgatcaaaagcttttt
tacaagttctcccccgtcctcatgcagcatattcccaaaaaagtggtggacgcgtggatc
cagatgggcaagcggctggacccaaagaagctcattccggctctgatgaactacagccag
atgggcagcacccagcagatcagtgaaaccatccgctacatggagttctgcgtgtacgag
ctgaccgtgacggaggaggccatccacaactacctgctgtctctctacgccaagtacaag
ccggactctctgctgtggtatctggagcaggcaggcacgcacgcctcagagatccactat
gacttgaagtacgccctcaggctgtgcgccgaaaacggctacctccgggcctgcgtgctg
gtttataggattatggaactgtacgaggaggcggtggatcttgcgttacaagtagatgta
gacttggccaagtcgtgtgcagacctgcctgaagacgacgaggagctgaggaaaaagctt
tggctgaagatcgcccggcatgtggtgcaggaggagaaagacgtgaagaaagccatgaac
tgtctgtccagctgcgacctgctcaagattgaagacatcctgcccttcttcccagacttt
gtcaccattgaccattttaaggaggccatctgcagctccctggaggagtacaaccagcac
atcgaggagctgaaacaggaaatggaagaggccacggagagcgccaagcgcatcagagaa
gacatccaggaaatgaggaacaaatacggcgtcgtggattcccaagaaaagtgtgctgct
tgcgacttcccgttgctcaacaggccgttctatctgttcctatgcggacacatgttccac
tacgactgcctgttccaggaagtgacccctcacctgacggcctttaagcagagtcgtctg
gaggatctgcagaaaaagctggccgcgaccacgcaatccaccaagtctcgacaccgcccg
gcgcccaaagacgaaggagacacttccagcctgggaaagggcaacgcgggcacgagtcgc
gagcagatcaaatccgacatggacgacatcattgcgtccgaatgcgtgtactgcggcgaa
ctgatgatcaagtccatcgacaagcctttcatcgatccacagaaatttgaggaggagaaa
tccagctggctgtga
DBGET
integrated database retrieval system
