Cebidichthys violaceus (monkeyface prickleback): 137872061
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Entry
137872061 CDS
T10484
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137872061 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cve03041
]
137872061 (prpf8)
Spliceosome [BR:
cve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
137872061 (prpf8)
Complex C
U5 SnRNP specific factors
137872061 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
137872061
NCBI-ProteinID:
XP_068566386
LinkDB
All DBs
Position
Unknown
AA seq
2338 aa
AA seq
DB search
MAATFPYRGVPGGMPPGVPPPVPVPDYMSEEKLQEKARKWQHLQAKRYSEKRKFGFVDAQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDSEEDSSVAEWLYEHQPLKDTAKFVNGTTYRRWQFTLPMMST
LYRLANQLLTDLVDFNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFN
DINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLIN
PISHRHSVKSQEPLPDDDEEFELPEYAEPFLKETPLYTDNTANGIALLWAPRPFNLRSGR
TRRAIDIPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFK
ATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKK
SRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYRYKYK
LMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLA
RQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESW
RCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLG
RLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTK
LLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIE
FMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQ
GINNLQDVWETTEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVI
NYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDT
PTESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRD
ARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRIL
PKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFT
KIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFY
TPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWES
EFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWR
VRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPT
WEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDL
TGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKETIHPR
KSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIE
RYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKAN
PALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGN
LTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQ
PKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLF
NLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWI
KVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQS
QLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDI
KETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTV
HLPNQLPGHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCS
FTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQV
SWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMYA
NT seq
7017 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaccttcccctacagaggggtccctggagggatgcccccaggtgtgccccct
cctgtgcctgtcccggactacatgtctgaggaaaaactgcaagagaaagcaagaaaatgg
cagcacttgcaggcaaagcgctactcagaaaagagaaagtttggctttgtggatgctcag
aaggaggacatgccccctgaacatgtccgcaagatcatcagggaccatggagacatgact
aatagaaagtttcgccatgacaagagggtgtaccttggtgccctcaagtacatgccccat
gctgtgctgaagctgctggaaaacatgcctatgccctgggagcagatcagagatgtgccg
gtcctctaccacatcactggagccatttcctttgtgaatgaaatcccctgggtcatcgag
ccagtctacatcgcccagtggggcaccatgtggatcatgatgcggcgtgagaagcgtgat
cgtcggcacttcaagcggatgcgctttccaccatttgatgacgaggagccgccgctggac
tacgctgacaacatccttgatgtggaaccactggaggcaatccagatggagctggactct
gaggaggactcttccgttgcagagtggctctatgagcaccaacccctcaaagacactgcc
aagtttgtgaatggcaccacctaccgtcgctggcagttcacactgcccatgatgtccaca
ctgtaccgcctggccaatcagctgctcacggacctggtggatttcaattacttctatctg
tttgacctcaaggccttcttcacttccaaggccttgaacatggccatccctggggggccg
aagtttgagccactggttagggacatcaacctccaggatgaagactggaatgagttcaat
gacatcaacaagattatcattcgacagcctatcaggactgagtacaaaatcgccttccct
tacctgtacaacaacttgccccaccatgtccacctcacctggtatcatacacccaacgtg
gtgtttatcaagacggaggatccagatctcccagcgttctactttgacccgctgatcaac
cctatttcacacagacattctgtcaagagtcaggagcctctgcctgatgacgatgaggag
tttgagcttcctgagtatgcagagcccttcctcaaggagaccccactctacacagacaac
acggccaacggcatcgctctgctgtgggcaccgaggcccttcaacctccgatctgggcgc
acgaggcgcgccatagatatccccctgatcaagaactggtaccgtgagcattgccctgca
ggacagccggtgaaagtacgtgtgtcataccagaaactgctgaagtactatgtgctcaat
gctctcaaacacagaccacccaaagcccagaagaagaggtatctgttccgctccttcaag
gccaccaagttctttcagtccaccaagctggactgggtggaggtgggtctgcaggtgtgc
agacagggttacaacatgctcaatctgctcatccaccgtaagaacctcaactacctgcat
ctcgactacaacttcaacctgaagcctgtcaagacactgaccacaaaggaaagaaagaag
tcccgattcgggaacgcctttcacttgtgcagagaggtgctgcgtctcagcaagctggtg
gtggacagccacgtgcagtacagactgggaaatgttgatgctttccagctgtctgatggg
ctgcagtacatcttcgcccatgtgggtcagctgaccggcatgtaccgctacaagtacaag
ctgatgagacaaatccggatgtgcaaagatctgaagcatctcatctactaccggttcaac
actggtcctgtgggcaaaggtccaggctgtggcttctgggctcccggctggagagtgtgg
ctgttcttcatgaggggaatcactccactgttggagaggtggctggggaatctgctcgcc
aggcagtttgaaggacgtcactccaagggcgtagccaagacggtcaccaaacagcgtgtg
gagtctcactttgacctggagttgcgtgccgctgtgatgcatgacatcttggacatgatg
cccgagggcatcaaacagaacaaggccagaaccatcctgcagcacctcagtgagtcctgg
aggtgctggaaggccaacattccctggaaggtgccaggcctgcccactcccattgagaac
atgatcctgcgctatgtgaaggctaaagctgactggtggaccaacactgcccattacaac
cgtgagcgaatccgccgcggagccactgtggacaagactgtgtgcaagaagaacctgggg
aggctgactcgtctgtacctgaaagctgagcaggagagacagcacaactacctgaaggat
ggcccctacatcacagctgaagaggcggtggccatttacaccaccactgttcactggctg
gagagtcggcggttctcgcccatccctttccctccgctgtcctacaaacatgacaccaag
ctgctcatcttggccttggagaggctcaaggaggcgtacagtgtgaagtctcgtctgaac
cagagtcagagggaggagctggggctcattgagcaggcttacgacaatcctcacgaggcc
ttgtccaggatcaaacgtcatctgctcacccagagagccttcaaagaggtgggtatcgag
ttcatggacttgtacagtcacctggtgcccgtgtatgacgtagagcccctggagaagatc
accgatgcctaccttgaccagtacctgtggtacgaggcggacaagagacgactcttcccg
ccctggatcaaacctgctgacactgaaccaccacccctcctggtctacaagtggtgccaa
ggcatcaacaacttgcaggacgtgtgggagacgacagagggagagtgcaacgtgatgctg
gagtcacgctatgagaagatgtacgagaagattgatctgactctgctcaacaggctgctg
cgtctcattgttgaccacaacatcgctgattacatgacggccaagaacaacgtcgtcatc
aactacaaggatatgaaccacaccaactcctacggcatcatcagggggctccagtttgcc
tcgttcattgtacagtactacggcctggtgatggacctgctggtgctcggcctgcaccgt
gccagtgagatggccggcccacctcagatgcccaatgacttcctcagtttccaagacaca
cccacggagagtgcccacccaatcagactgtactgccgctacatcgaccgcatccacatc
ttcttcaggttctctgctgatgaggccagagacctgattcaaaggtacctgacggagcac
ccagaccccaacaatgagaacatagtgggttataacaacaagaagtgctggccccgcgat
gcccgcatgagactgatgaagcacgatgtcaacctgggacgtgctgtgttctgggacatc
aagaaccgtctgcccagatcagtgactactgtccagtgggagaacagctttgtctcggtc
tacagcaaagacaatcccaacctgctcttcaacatgtgtggctttgagtgccgcatcttg
ccgaagtgccgcaccagctacgaggagtttactcacaaggatggtgtgtggaacctgcag
aacgaggtaaccaaagagaggacagcgcagtgtttcctgcgtgtggatgatgaatcgatg
caacgcttccacaacagagtgcgtcagatcctgatggcctctggatccaccacattcacc
aagattgtgaacaaatggaacacggctctgatcggtctgatgacgtacttccgtgaggct
gtggtcaacacccaggagctcctggacctgctggtgaagtgtgagaacaagatccagaca
cgtatcaagatcggcctgaactccaaaatgccgagccgcttccctcctgtagtcttctac
actcccaaagagttgggcggcctcggcatgctgtccatgggccacgtgcttattccacag
tcggaccttcggtggtcaaagcagacagatgtgggtatcacccacttcaggtccggaatg
agccatgaggaagaccagctgattcctaacttgtatcgttacattcagccgtgggagagc
gagttcatcgactcccagagggtttgggccgagtacgccctcaaaagacaggaggccatc
gcccagaacaggcgtctgaccctggaagatttggaggactcgtgggacagaggaatcccc
cgtatcaacacactcttccagaaggacagacacacactggcctatgacaaaggctggaga
gtcaggaccgatttcaaacagtaccaggtgctgaagcagaatccgttctggtggacccac
cagaggcacgacggcaaactgtggaacctgaacaactaccgcacagacatgatccaggcc
ctgggtggtgtggagggcatcctggaacacacactcttcaaaggcacttacttccccacc
tgggagggtcttttctgggaaaaggccagtggctttgaggagtccatgaaatggaagaag
ctgaccaatgcccagcgctctggtctgaaccaaatccccaaccgtcgcttcacactttgg
tggtcccccaccatcaacagagctaacgtgtatgtgggtttccaggtgcaacttgacttg
acaggaatcttcatgcacggcaagatcccaacactgaagatctccctcattcagatcttc
agggctcacttgtggcagaagattcatgagagcgttgtcatggatctctgtcaggtgttt
gatcaagagctggatgctcttgagatcgagacggtgcagaaggagaccatccaccccagg
aagtcgtacaagatgaactcctcgtgtgcagacatcctcctgtttgcatcctacaagtgg
aacgtctccagaccgtctctgctggctgactcaaaggacgtgatggacagcaccaccaca
cagaagtactggatcgacatccagctgcgttggggtgactatgactcgcatgacatcgag
cgctacgccagggccaagttcctggactacaccaccgacaacatgagtatctacccctcc
cccaccggggtgctcattgccatcgacctggcttacaacctccacagtgcttatggtaac
tggttccctggaagcaagcctctgatccagcaggccatggccaagatcatgaaggctaac
ccggccctgtacgtgctcagggagcgcatccgcaaaggtctgcagctgtactcctccgag
cccactgagccctacctgtcctcacagaactatggcgaactcttctccaaccagatcatc
tggtttgtagacgacaccaacgtgtacagagtcaccatccacaagacctttgagggtaac
ttgaccacgaagcccatcaatggagctattttcatcttcaaccccaggactggtcagctt
ttccttaagatcattcacacatctgtgtgggccggacagaaacgtctgggacagctggcc
aaatggaagacagctgaagaagtggctgctctgattcgctccctccctgtggaagagcag
cccaaacagatcattgtaaccaggaagggcatgctggaccctctggaggtccacttgctt
gacttccccaacattgtgatcaaaggctctgagttgcagctgcctttccaggcctgtctg
aaggtggagaagtttggagacctgatcctgaaggccacagagcctcagatggtgctgttc
aacctctacgacgactggctcaagaccatctcgtcttacacagccttctctcgactcatc
ctgatcctgagagcgctccacgtcaacaacgaccgcgctaaagtgatcctgaaacccgac
aagaccaccatcaccgagcctcatcacatctggcccacgctcactgacgaggagtggatc
aaggtggaggtgcagctcaaagatctcattctggcagattatggcaaaaagaacaatgtg
aacgtggcctcactgacccagtctgagatccgtgacatcatcctgggtatggagatctcc
gctccgtctcagcagcgccagcagattgctgagattgagaagcagaccaaagagcagtcg
cagctcaccgccacacagacccggacggtcaacaagcacggtgacgagatcatcacctcc
accacctccaactatgagacccagaccttctcctccaagacggaatggagagtcagggcc
atatccgctgccaacctccacctccgaaccaaccacatctacgtgtcatctgacgacatc
aaggagacgggctacacctacatcctgcccaagaacgtgctcaagaagttcatctgcatc
tcagatctgcgagcacagattgcaggctacctgtatggcaccagtccaccagacaacccc
caggtgaaggagatccgttgtatcgtcatggtgccacagtgggggacacaccagactgtc
cacctgcccaaccagctgcctggtcatgaataccttaaagaaatggagcccctcggctgg
atacatactcagcctaatgagtctccccagctgtccccacaggacgtcaccacccatgca
aaggtcatggctgacaacccttcttgggatggagagaagacgatcatcatcacttgcagc
ttcaccccgggctcgtgcacgctcacagcctacaagctgacacccagtggctacgagtgg
ggccggcagaacacagacaagggcaacaaccctaaaggctacctgccgtcccactatgag
agggtgcagatgctgctctctgaccgtttcctgggcttcttcatggtgcctgggcaggtg
tcctggaactataacttcatgggtgttcgtcatgaccccaacatgaagtacgacctgcag
ctggccaacccaaaggagttctaccatgaagtccaccggccttcgcacttcctaaacttt
gcctcactgcaggagggcgagatctataatgcggaccgagaggacatgtacgcctga
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integrated database retrieval system
