Cebidichthys violaceus (monkeyface prickleback): 137872479
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Entry
137872479 CDS
T10484
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04270
Vascular smooth muscle contraction
cve04625
C-type lectin receptor signaling pathway
cve04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
137872479 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
137872479 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
137872479 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cve04131
]
137872479 (arhgef12a)
Membrane trafficking [BR:
cve04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
137872479 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
137872479
NCBI-ProteinID:
XP_068566796
LinkDB
All DBs
Position
Unknown
AA seq
1439 aa
AA seq
DB search
MSDTQSSFTDRFPKKANRTSSILSKDHPPDKKPKSDKTSLPSNEFDPTEALVVQKSGSSS
LLAEGKPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKDDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLSEAESEMLGVSISSPNSPAA
ERPYSPLDRLSFTQPPWDENSSVCNQRVDMLQKMLSKGQQELQAMKEEYSRNPSPKLLKD
IQEAKKHIPQLQGQLFKATGATQEAVPGGDADDGSMFATEHSKGDNSTDLSWSSTPISRG
FGPGSPESLYPRESSCPSPKSTPRNSFNSCHSPEAEDATDLDSLSPTTVSSPSSSRLVSQ
IIGAEDDYFDSDQEQTNGQCNSFNNIEQLKSRPAHLAAFLHHVISQFDPAPVLCYLYADF
YKQTNSKETRRVFMDLHTFFIDRGANLKVAVPESVSTDLDRRRTELIPEEINRQHVQTLQ
DSLLLDIQKNLEDFRQKRSMGLTVAEVELSRLDQERVRDRVALERERSYAENIITKIEDI
LLTTQTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKTEKEGE
EKVKKPRFPSILGPQRRPSRIEAASVGKALDGRPRPQKQLSQPTLGASDHMEGGRLRGSQ
SSEGSELIHSMSINSSSPNSATYSSDTSRDTDMGGTPTSGPSRLSDGLQSDPLDGLPYPA
SHFDLYSLDQLQEDDRESDRAHEGTPKAIRRLEGLGAADVQSEDDQGTDSEHDPPNWQQL
VGREILAGLRPQEIKRQEVINELFYTERAHVRMLRVLDHVFYQKLSKEAILPPADIKNIF
TNLDEILQLHVSILEQMAAVRKRNESSVIDQIGDDLLSWFSDGEEEKIKKAVGTFCSNQP
FALEIIKTKQKKDSRFTSFVQEAESNRLCRRLQLKDIIPVEMQRLTKYPLLLENIAKYTD
NAVEKDKVKQAADCCRKILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPMILELKN
LDLTKRTMVHEGPLSWKVNKDKTIELYTLLLQDILVLLQKQDERLILKCHSKNLAGTADT
KHIFSPIIKLNTVLVRSVATDNKSFFVLSMSDNGAQIYELMAPTVSDQRTWQRLITQRAD
AMKVKPHSVIPLPQTDGERDGVEIITAGVSRLSRDPDRTSTGSTQSTDKESSPAPRSVTQ
SSLPGNNPFEGIKAEEEEEEEGFVDPEFPYQAAEDGKEGDSFNMFPSRADEALKTLAALK
QVLVTQLMSQEALEQTKRSTGVRLLRTTSLRTPVDSRARVMVHNGSEKISSQTEDPTQDL
GSGDTGFFDSPEDYAGYLVLEGYGGPGESSTDDDILASTTGKQLRSSQGCAADSGINLRF
SSTSQAGSLSSFSRQVLSHLRNLQANLNYLKEVEAKYNNLIRQRPERSASDTDGNKDKR
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaaacagaaccagc
agcattctcagtaaagaccaccccccggacaagaaacccaaaagtgacaaaacctcactt
ccctccaatgagtttgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
ttgctagcagaggggaagcctgagtcctgtggtctggttcaacgatgtgtaatcatccag
aaagatgaaaatggctttgggctcactgtcagtggtgacaacccagtgtttgtgcagctt
gtcaaagacgatggggctgctatgcgggcaggtgttcagacaggagacaggatcatcaag
gttaacgggacccttgttacacattcaaatcacattgaggtggtgaaacttatcaaatcg
ggctcctatgtggccctcacagtgttggggcgtcctccagggctcgcccagatccctctg
tctgaagcagagtctgaaatgctcggggttagcatttcctctccaaactccccagcagca
gaacgcccctacagtcctctggaccgcctctccttcactcaaccaccatgggatgaaaac
agcagtgtctgcaaccagagggttgacatgttgcaaaagatgctgtcaaaagggcagcag
gagctgcaggccatgaaggaggagtacagcaggaacccctcccccaaactactgaaagac
atccaggaagctaagaaacacattcctcagctgcagggtcagctcttcaaggccactggg
gcaacacaggaggctgttccaggtggagatgcagatgatggtagcatgtttgcgacggag
cactctaagggagacaacagtacagacctgtcctggagcagcactcctatatctcgtgga
tttggacctggatctccagagagcctttacccaagagagtcatcctgccccagcccaaag
agcacccccaggaacagcttcaactcctgccactctccagaggcagaggacgccactgac
ctggactctctgtcccctaccacagtcagcagtccctcttcctcccgcctcgtctcgcaa
atcatcggcgctgaggatgactattttgattcagaccaggagcagacaaatggccagtgt
aacagctttaacaacatcgagcagctcaagtctcgtcccgcccacctcgcagccttcctt
caccatgtcatctctcagttcgaccctgctcctgtgctgtgctacctctatgctgacttc
tacaagcagaccaactccaaagagaccagacgggtgttcatggacctccacacttttttc
attgaccgtggagcgaatttgaaagttgctgtccctgaatccgtctctactgatctcgac
cgccggcggacagaactgatccctgaggaaataaacagacaacatgttcaaacactgcag
gactctctgctccttgacatccagaagaacctcgaggatttcaggcagaagcgcagtatg
ggcctaacggtggctgaagtagagctgtccagactggaccaagagagagtcagagaccgt
gtcgctctggagagagagcgctcatatgctgaaaacatcatcaccaagatagaggacatc
ctgttaactactcagaccacagaggaagagaaatgcactacaatgcagtatgtcatctat
acgtacatgaagcaccttggtgtgagggtcaaggaacctcgaagtctggagtccaaacgt
gtcaggatcaactttcttcccaagatcaagaaaagcatcaagacagaaaaggaaggagaa
gagaaggtgaagaaaccccgatttcctagcatccttggacctcagcgtcggcccagccgc
attgaagcagcatctgtaggtaaagccttggatggtcgcccccggccgcagaaacagttg
tctcagcctacacttggggcaagtgatcacatggagggtggtcgtctcagaggcagccaa
tcgagcgagggctctgaactcatacactccatgtctatcaactcctcatccccaaacagc
gccacctatagctcagacactagccgagacactgatatgggtgggactccgacctcaggc
ccgtccaggctgagtgacggccttcagtccgaccctcttgatgggttgccgtaccctgct
tcgcactttgatctttatagcctggaccaactgcaagaggatgacagagaaagtgacaga
gcacacgagggaacaccaaaggccataagaaggcttgagggactgggcgcagctgacgtc
cagagtgaggacgaccagggaaccgactctgagcatgaccctccaaactggcagcagctg
gtggggcgagagatcctagcgggtctcaggcctcaggaaatcaagagacaggaagtcatc
aatgagctgttttatacagagcgcgcacatgtgaggatgctgagagttttggaccacgtt
ttctaccagaagctctcaaaagaggccatcctgcctcctgctgatatcaagaacatcttc
accaacctggacgagattctacagctgcacgtttcaatactggagcaaatggcagccgtt
cggaagagaaatgagtcttcagtaattgatcagataggagacgacttgctctcctggttc
agcgatggggaggaggagaagatcaagaaggcggtggggacgttctgcagcaaccagcca
tttgctcttgagatcatcaagaccaagcagaagaaagactcgcggtttacttcgttcgtc
caggaggcagagagtaacagactgtgtcgccgactgcagcttaaagacatcattcctgta
gagatgcagcggctcaccaagtaccccctgctgctagagaacatcgccaagtacacagat
aacgcagtggagaaggacaaagtgaagcaggcagcagactgctgtaggaagattctcaat
cacgtcaaccaggctgttaaggaatctgaggacaagcagaggttggaggactatcagaga
agattggacctctcttctttgaagcagacagacaaccccatgatcctggagctaaaaaat
ttggatttaaccaagagaacaatggtgcacgagggaccactgtcatggaaagtgaacaag
gacaagactattgagttgtacaccctcctgctgcaggacatcttggttctgctacagaaa
caagatgaacgtctgatcctgaagtgtcacagtaaaaacctggcaggcaccgcagatacc
aaacatatcttcagccccatcatcaaactcaatactgtgctggtgcgctctgtggccaca
gacaacaagtccttcttcgtcttatccatgtcagacaacggagcccagatctatgagctg
atggcgcccacagtctcagatcagagaacgtggcagcgtctaatcacccagagagccgat
gccatgaaagtcaaacctcacagcgtcatacccttacctcagactgatggggagcgagat
ggtgtggagatcattacagcaggtgtttccaggctgagtcgagacccagaccgcacatcc
accggcagcacccagtccacagataaagagagcagtccagcgcctagaagtgtgacgcag
agctctctaccaggtaataatccatttgagggaataaaggcagaggaagaggaggaggag
gaaggttttgtggacccagagtttccttatcaagcggctgaagacggcaaagaaggagac
tcgtttaacatgtttccctccagagcagacgaagcactgaaaacattggcagcattgaag
caggtgttggtgacccagctgatgtcccaggaggctttagagcaaaccaaacgctccacg
ggggtacgtctcctcaggaccacctctctgcggacacctgtagacagccgcgctcgagtg
atggtccacaatggctcagagaagattagctcccagacagaggacccaactcaggacctg
ggctctggggacacgggcttctttgattctcctgaagattatgcagggtatttagtcctg
gagggttacggtggcccaggggagagcagcacagacgatgacatcttggcatcaaccaca
ggaaagcagctgagatcctcacaaggctgtgctgccgactccggcatcaacttgcgtttt
tcttcaacgtcacaggccggcagcctctcctcttttagcagacaggtcttgtctcacctc
agaaaccttcaggccaacctcaactatctgaaggaggttgaggccaagtacaataatcta
atacgccaaaggccagagaggtcagcatcagacacggatggaaacaaagataagagatag
DBGET
integrated database retrieval system
