Cebidichthys violaceus (monkeyface prickleback): 137872648
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Entry
137872648 CDS
T10484
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04510
Focal adhesion
cve04512
ECM-receptor interaction
cve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137872648 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137872648 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
137872648 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cve00535
]
137872648 (col9a2)
Proteoglycans [BR:
cve00535
]
Extracellular matrix (ECM) proteoglycans
Others
137872648 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
137872648
NCBI-ProteinID:
XP_068567066
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MAALSALLKTWVILQTLCLALAQVRGPLGPQGQAGPPGPSGMPGSDGIDGDKGPPGSPGS
PGLKGEPGEPGLNGAAGKNGIDGLIGAKGDRGPIGSPGPKGGPGPSGEPGPPGPGLPGLA
GAPGPIGLPGEIGSSGPKGIMGSPGPPGLPGPPGKPGPPGKFIGGEEGSADFQCPLNCPA
GPKGPQGLQGIKGHKGRGGVLGEPGSIGKSGLKGEVGISGEQGIPGPPGPMGLRGYPGMM
GPKAEAGPRGYKGINGPVGISGPPGEEGPQGPPGEAGDKGDKGSRGIQGPQGAVGKKGEN
GLPGIDGKDGTPGIPGIKGSPGQAGMPGPPGPQGAAGLPGSPGSKGGLGAKGEPGPRGHV
GMSGAPGFLGEPGLPGEAGMEGVPGPKGDRGQRGAVGPQGVVGKAGSKGERGPIGVPGAQ
GLSGTMGDKGFQGKVGSKGDDGDPGVEGLAGEKGEKGLSGEPGPKGQQGIRGDSGHNGPT
GDPGKPGDLGPPGLPGPRGLNGERGVPGMPGIQGSSGRDTSDQHIIEVVLKMLQERLAAV
AVSAKRAVLGGAGVMGPPGPPGPPGSAGPQGPHGLPGARGIPGMIGGPGQIGNTGLKGKR
GGKGDRGDPGKPHPGAPGPPGIQGPSGVHGVARDGRHGERGPQGSAGEAGYPGKAGSTGL
PGFCEAAMCLAASAYTSPRLQEAGSIKGPNI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctctctgccttgctgaagacctgggtaatactgcagaccttgtgcctggct
ctggcccaagtgaggggtccacttggacctcagggccaggccggcccaccaggcccctct
ggcatgcctgggtcagacggcattgatggagacaaaggaccacctgggtcccctggttca
ccaggactaaagggagagccaggagagcccggtcttaatggagcagcaggaaagaatggc
attgacggtttgattggagcaaagggtgatcgaggtcctattgggagccctgggcctaag
ggtggacctgggccaagcggcgaacctggacctcctggaccgggccttccaggactggct
ggcgctccagggccaattggtcttccgggtgaaattggatcatctggtccaaagggtatc
atgggatcacctggacctccaggacttcctggacctcctggcaagccaggtcctccaggg
aagttcattggtggagaagagggaagtgcagacttccagtgtcctcttaactgtccggca
ggacctaaaggcccccagggactgcagggaatcaagggacacaaaggacgtggtggtgtt
ctcggagagccgggtagcataggaaaatcgggtctcaagggagaagtgggcatctctggg
gaacagggcatcccaggacctccgggtccgatgggtctgagaggttatccaggaatgatg
ggccctaaagcggaagcagggcctcgtggttacaagggcatcaacggacctgtaggaata
tctgggcctcctggtgaggaggggcctcagggaccacccggagaggcaggagacaaggga
gacaaaggcagccgaggtatccagggcccacagggtgcggttggcaaaaagggagagaat
ggtctgccgggtattgatggaaaagatggcacacctggtattccagggatcaagggcagc
cctggccaggctgggatgcctggtcctcctggtcctcagggagcagcgggattgcctggc
agcccagggtcaaaaggtggacttggagctaagggcgagcctggacctaggggtcacgtt
ggcatgtctggtgctcccggattcctgggtgagcctggtcttcctggtgaggctggtatg
gaaggagttcctggacccaagggtgacagaggccagcgaggagcagttgggccacaggga
gttgtcggaaaggctggaagcaaaggagagagaggaccaatcggtgttccaggtgcccag
ggtcttagcggaaccatgggagacaagggcttccaaggaaaagttggatcaaagggagac
gatggtgatcccggtgttgagggattggctggtgagaaaggtgaaaagggtttgtctggt
gaacccggccccaaaggacagcaaggaattaggggtgactccggacacaatggacccact
ggagaccctggtaaacccggagacctgggaccaccaggactgcccggtcctaggggactc
aatggagagcgaggagtacctggcatgccaggcattcagggatcatcaggacgcgatacg
tctgaccagcatattatagaagtggtgttgaagatgttgcaggagaggctagctgctgtg
gcagtgagcgccaagagggctgtgctgggtggagcgggtgtaatgggacctcccgggccc
cctggaccccctgggtcagctggccctcaggggccacatggcttgcctggtgcccgtggc
attcccggcatgattggaggacctggacagattggaaacacaggacttaaaggaaagagg
gggggaaagggagacagaggagatcctggtaaaccccacccaggagcaccaggaccccca
ggaatacaaggtccttcaggtgttcatggtgtggctcgggacggcaggcacggcgagaga
ggacctcagggatcggccggagaggcaggttaccccggtaaggcgggttcgacaggtctc
cccggcttttgcgaggcggcgatgtgtttagctgcgtcagcatacacatccccaagacta
caggaggcgggatcaatcaaaggacccaatatttag
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