KEGG   Cebidichthys violaceus (monkeyface prickleback): 137872695
Entry
137872695         CDS       T10484                                 
Symbol
col1a2
Name
(RefSeq) collagen alpha-2(I) chain
  KO
K06236  collagen type I alpha
Organism
cve  Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04510  Focal adhesion
cve04512  ECM-receptor interaction
cve04518  Integrin signaling
cve04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cve00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137872695 (col1a2)
   04518 Integrin signaling
    137872695 (col1a2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    137872695 (col1a2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    137872695 (col1a2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cve00536]
    137872695 (col1a2)
Glycosaminoglycan binding proteins [BR:cve00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137872695 (col1a2)
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 137872695
NCBI-ProteinID: XP_068567169
LinkDB
Position
Unknown
AA seq 1351 aa
MLSFVDTRILLLLAVTSYLASCQSGPRGDKGPRGDRGPQGPNGRDGKPGLPGAAGPPGPP
GLGGNFAAQYDGVKAPDAGPGPMGIMGARGPPGPPGPPGAQGHTGHPGEPGEPGQTGHVG
PTGPSGPPGKSGEDGNNGRPGKPGDRGTPGPQGARGFPGTPGLPGMKGHRGYTGLDGRKG
ENGGAGAKGENGAHGASGSPGLAGARGMSGERGRPGPAGPAGSRGADGNVGPSGPAGPLG
SAGPPGFPGGPGPKGEIGPGGAPGPSGAQGARGEPGVNGAVGPVGPIGNPGANGLNGAKG
PAGTPGVSGAPGFPGPRGGPGPQGPQGAAGQRGLSGDPGVQGIKGDGGPKGEPGNSGPQG
PPGSQGEEGKRGPNGELGANGPAGNRGARGASGSRGMPGSEGRTGPIGMPGARGSTGNSG
PRGPPGDAGRAGESGPAGLRGLPGSPGSSGPPGKEGPAGPAGQDGRSGPPGPTGPRGQPG
NIGFPGPKGPSGEAGKPGDKGSAGPTGLRGTPGADGNNGATGATGPAGGPGEKGEQGPSG
APGFQGLPGPAGGAGEAGKAGERGIPGDHGVAGPAGAKGERGNPGAAGATGPQGPIGARG
PAGAPGTDGGKGEPGAIGAAGGPGHQGPGGMPGERGAAGGPGTKGEKGEGGHRGPDGNAG
RDGSRGMAGPAGPPGPTGANGDKGESGGFGPSGPAGPRGGSGERGEVGSAGSPGFAGPPG
SDGQTGARGERGPAGVKGEVGPSGPSGPAGQSGPAGASGPAGPTGGRGDNGPPGLTGFPG
AAGRVGGSGPAGIVGPPGPAGSAGKDGPRGLRGDSGPSGPSGEQGMVGPPGLSGEKGPSG
ESGPPGSPGAPGTSGPLGLQGFVGLPGARGDRGTPGGAGGLGEPGRVGPAGPSGARGPPG
NIGLPGMTGPQGEAGREGNSGNDGPPGRPGSPGFKGDRGEPGPAGSMGVSGSPGPAGPSG
AAGRPGNRGESGPGGPSGPVGAAGARGAAGSAGTRGEKGVAGEKGERGMKGLRGHAGLQG
MPGPSGPSGDTGAAGANGPSGPRGPAGPHGPPGKDGRAGGHGTLGSPGARGPPGYVGPAG
PPGSPGLAGPPGPAGGGYDVSGYDEYRADQPSLRAKDYEVDATIKSLNSQIENMLTPEGS
RKNPARTCRDIKLSHPEWSNGFYWIDPNQGCINDAIKVFCDFTTRETCIHAHPESIARKN
WYRSTEGKKHVWFGETINGGTEFTYNDATLSPQSMATQLAFMRLLSNQASQNITYHCKNS
NAYMSDETGNLKKAVVIQGSNDVELRAEGNSRFTFSVLEDGCTRHTGEWSKTVIEYRTNK
PSRLPILDIAPLDIGGADQEFGLDIGPVCFK
NT seq 4056 nt   +upstreamnt  +downstreamnt
atgctcagctttgtggatactcggattctgttgctgcttgcagtaacttcatacctagca
tcatgtcaatcgggtccccgaggagacaaaggacctcgaggtgacaggggtcctcagggc
ccaaatggaagagatggcaaacccggactccctggcgccgctggcccccctggtccccct
gggctcggaggaaactttgctgctcagtatgatggtgtaaaagctcccgatgccggccct
ggacccatgggtataatgggcgctagaggccctcctggacctcctggaccccctggagct
cagggacacactggacaccctggtgagcccggagagcctggacagactggtcatgttggt
cccactggcccctctggaccccctggcaaatctggagaggatggtaacaacggcagacct
ggcaagcccggagacagaggtacccccggcccacagggcgctcgtggattccctggaaca
cctggacttccaggaatgaagggacacagaggctacactggtttggatggacgcaaggga
gagaacggtggtgccggtgccaagggtgagaatggtgcccacggagcttctggaagtcct
ggactggctggagctcgtggtatgagtggtgagagaggccgacccggccctgctggccct
gctggttctcgtggtgctgatggcaatgttggaccctctggccctgctggtcccctcgga
tctgctggtcccccaggtttccccggtggccccggacccaagggagagattggacccggt
ggagctcctggcccatctggagctcagggagctagaggagagcccggtgtcaatggtgct
gttggccccgttggtcccattggaaaccctggtgctaatggcctgaatggagccaaggga
cctgctggtacccctggtgtttctggagctcctggcttccccggaccaagaggaggacct
ggaccccagggccctcagggtgctgctggacagagaggcctttctggagatcctggtgtt
cagggtatcaagggagatggcggacccaaaggagagcctggtaactctggacctcaggga
ccccccggatctcagggtgaggaaggcaagagaggacccaatggtgagctcggtgccaat
ggacctgctggaaaccgtggagctagaggcgcctctggcagccgtggtatgcctggtagt
gagggaagaactggcccaattggcatgcctggtgcccgtggttccactggtaattctgga
cctcgtggaccccctggagatgctggccgcgccggtgagtctggcccagctggtctcagg
ggtctcccaggaagccctggaagctccggacccccaggaaaggagggacctgctggaccc
gctggacaagatggccgctctggacctcccggcccaactgggcctagaggccagcccgga
aacattggtttccccggacccaagggaccttctggtgaggctggcaagcctggagataag
ggatctgcaggccccactggactgagaggaacccctggagctgatggcaacaatggagcc
actggtgctactggacctgctggcggtcctggtgagaagggagagcagggaccttctgga
gctcctggcttccagggtcttcccggccccgctggaggtgctggagaggctggcaaggcc
ggagaaagaggaatcccaggagaccatggagttgctggacccgctggtgccaagggagag
cgtggtaaccctggtgctgccggagctactggacctcagggaccaattggagcccgtgga
cccgctggagcccctggaaccgatggtggcaagggagagcctggtgctattggagctgct
ggtggacctggacaccagggacctggtggcatgcccggagagcgtggagctgctggtggc
cctggaaccaagggagagaagggagagggtggacacagaggacccgacggcaatgctggc
agagatggtagccgtggtatggctggacccgctggacctccaggacccactggagccaat
ggtgataagggtgagagcggtggcttcggaccttccggccccgctggacctcgtggaggc
tctggagagcgcggagaggttggatctgctggatctcccggattcgctggaccccctggt
tctgacggtcagaccggagcaagaggagagcgtggacctgctggagtaaagggagaagtt
ggcccatctggtccttctggacccgctggacagtctggacctgctggtgcttctggccct
gctggacctactggtggtcgtggagacaacggacctcctggtctgactggtttccctggt
gctgctggcagagttggtggttctggtcccgctggtattgttggaccccctggccccgct
ggttcagctggtaaggatggtcctcgtggtctccgtggagattctggtcccagtggtcct
tctggagagcagggtatggttggaccacctggtctttccggagagaaaggaccctctgga
gagtctggtccccctggttctcctggtgctcctggaaccagtggtcctcttggacttcag
ggattcgttggtctgcctggtgctagaggagatcgtggtacacccggtggtgctggtgga
ttgggagagcctggtagagttggacctgctggtccctctggagctcgtggtccccctggc
aacattggcctgcctggtatgaccggaccccagggagaggctggacgtgagggtaactct
ggtaacgatggaccccctggccgtcctggttctcctggattcaagggagaccgtggtgag
cccggacctgctggttccatgggagtttctggttcccccggacctgctggaccctctgga
gcagctggcagacctggaaaccgtggagagtctggcccaggaggtccctctggacctgtt
ggagcagctggagctagaggtgccgctggatctgctggaacccgtggtgagaagggagtt
gctggagagaagggagagagaggcatgaagggtctgcgtggacatgctggtctccaggga
atgcctggaccttctggaccctccggtgacactggagctgccggagcaaatggaccttct
ggacccagaggacctgctggaccccacggaccccctggtaaggatggcagagctggcggc
catggaacccttggctctcctggtgctcgtggaccccctggatacgttggacctgctggt
cctcctggatctcccggtctggccggacctcccggccccgctggtggtggatatgatgtc
tctggatacgatgagtacagagccgatcagccctctctgagagccaaggactatgaggtc
gatgccaccatcaagtccctcaacagtcagatcgagaacatgctcacccctgagggatcc
aggaagaaccctgcccgcacctgccgtgacatcaagctcagccaccccgaatggagcaac
ggattctactggattgaccccaaccagggatgcatcaatgacgccatcaaggtcttctgc
gacttcaccacccgtgagacctgcatccacgcccaccccgagagcatcgcccgcaagaac
tggtacagaagcacagagggcaagaagcacgtctggttcggagagaccatcaacggtggt
actgagtttacctacaacgatgcgacccttagcccccagagcatggccacccagcttgcc
ttcatgcgcctgctgtccaaccaggctagccagaacatcacctaccactgcaagaacagc
aacgcctacatgagtgatgagaccggtaacctgaagaaggctgtggtgatccagggctcc
aacgatgttgagctgagagccgagggcaacagccgcttcaccttctccgtgctggaggat
ggctgcactagacacactggtgagtggagcaagacagtgattgagtacagaacaaataaa
ccatctcgcctgcccatcctcgacattgcacctttggacattggtggagctgatcaggag
tttggtttggacattggcccagtctgtttcaaataa

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