Cebidichthys violaceus (monkeyface prickleback): 137874620
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Entry
137874620 CDS
T10484
Name
(RefSeq) ATP-dependent RNA helicase DHX15-like isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137874620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cve03041
]
137874620
03009 Ribosome biogenesis [BR:
cve03009
]
137874620
Enzymes [BR:
cve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137874620
Spliceosome [BR:
cve03041
]
Complex A
U2 snRNP components
U2 related factors
137874620
Complex B
137874620
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
137874620
Ribosome biogenesis [BR:
cve03009
]
Eukaryotic type
90S particles
Helicases
137874620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
Cas3-like_C_2
Flavi_DEAD
AAA_25
nSTAND3
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
137874620
NCBI-ProteinID:
XP_068569554
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MFKRHRLDLGDDNSPGKRRPTDGRDRDRDRDERSRDRDRDRAPDRDWDRDVKSSGVPNNP
AAGFLKQNPVQQQINPFTNLPHTPRYYEILKKRLQLPVFEYRERFTDILMRHQSFVLVGE
TGSGKTTQIPQWCVDMVRSMPGTKRAVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSI
RFEDCSSAKTVLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVR
QRADLKVIVMSATLDAGKFQVYFDRCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQ
IHMCEVDEGDVLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIF
EPPPPNKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAI
SKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDD
LVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCEF
NCSNEILSVTAMLSVPQCFVRPTEAKKVADESKMRFAHIDGDHMTLLNVYHAFKQNHDST
QWCYENFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFNSRDYYTNIRRALVTGFFMQI
AHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKI
APQYYEMGNFPQCEAKRQLERIIAKVSSKEFTQY
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagcgacatcgtttagatttgggggatgataattcgcccggtaaaaggagacct
accgacgggcgtgaccgggacagagaccgcgatgaacggtcgagggacagggaccgggac
cgagccccagaccgcgactgggacagagatgtgaagtcatccggggtccccaacaaccca
gctgcaggcttccttaagcaaaaccccgttcagcagcagatcaaccccttcaccaacctg
ccccacacgccgcgctactacgagatcctgaagaagcggctgcagctgcccgtcttcgag
tacagagagcgcttcactgacatcctgatgcgtcaccagtcgtttgtgctggtgggagag
acgggctctggaaaaaccacacagatccctcagtggtgcgtggacatggtgcggtcgatg
ccggggacaaagagagcggtggcctgcacccagcccaggagggtggcggccatgagcgtc
gcacagagggtcgctgatgagatggatgtcatgctgggccaagaggtgggctactccatc
aggttcgaggactgcagctccgccaagactgtactcaagtacatgactgatggaatgttg
ctgcgagaggccatgaatgaccctctgctggagcgctacggtgtcatcatcttggacgag
gctcacgaacgcacattagctacagatatcctcatgggggtcctcaaggaggtggtccgc
cagagggctgacctcaaggtgatcgtgatgagcgccacgctcgacgccggcaagttccag
gtgtactttgacagatgcccgctgctcaccatccccggacgcacgcaccccgtggagatc
ttctacacgcccgaaccagagcgggactacctggaggcggccatccgcacggtgatccag
atccacatgtgtgaggtggacgaaggggacgttctgctcttcctcactggacaagaggaa
attgatgaagcctgcaagcggatcaagagggaggtcgacgacctgggccccgaagtcggc
gacatcaagatcatcccgctgtactccactctacctccacagcagcagcagaggatcttt
gaaccgcccccacccaacaaaccaagcggtgccatcggaaggaaggttgtcgtgtcgaca
aacatcgccgagacgtcgctgaccatcgacggcgtggtgtttgtaattgatcccggattc
gccaagcaaaaggtgtataatccacgcatcagagtggaatcccttctggttacggccatc
agcaaggcctcggcccagcagagggcaggtcgtgctggacgcacacgcccaggaaagtgc
ttccgcctttacacagagaaagcttacaagacagaaatgcaggacaacacgtatccagag
attctgaggtccaatctgggctctgtggtgctgcagctgaagaaattgggtatcgacgat
ctggtgcactttgacttcatggacccaccagccccagagaccctgatgcgagccctggag
ctgctgaactacctggcggcgctcaacgacgacggtgacctgacggagctgggctccatg
atggcggagttcccgctggacccccagctggccaagatggtcatcgccagctgcgaattc
aactgttccaacgagatcctctccgtcactgccatgttgtcagtcccacagtgcttcgtc
cgacccacggaggctaagaaggtggccgacgagtccaagatgcgcttcgcccacatcgac
ggagaccacatgacgctgctcaacgtctaccacgccttcaagcaaaaccacgactccact
cagtggtgctacgagaacttcgtcaactaccgctcgctgatgtcggcggacaacgtgcgc
cagcagctgtccaggatcatggaccgcttcaacctgccgcggcggagcaccgagttcaac
agcagagactactacaccaacatccgccgcgcgctggtcactggcttcttcatgcagatc
gctcacctggaacgcaccggccattacctgacggtgaaggacaaccaagtggttcagctg
cacccctccaccgtgctggaccacaagcccgagtgggttctgtacaacgagtttgtgctc
acgaccaagaattacatccgcacgtgcaccgacatcaagccagagtggctggtgaaaatt
gccccgcagtactacgagatgggtaacttcccccagtgtgaagcaaagagacagttggag
cgtatcattgcgaaagtctcatcaaaggaattcactcagtactaa
DBGET
integrated database retrieval system
