Cebidichthys violaceus (monkeyface prickleback): 137874629
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Entry
137874629 CDS
T10484
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cve00536
]
137874629
Glycosaminoglycan binding proteins [BR:
cve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137874629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
137874629
NCBI-ProteinID:
XP_068569572
LinkDB
All DBs
Position
Unknown
AA seq
695 aa
AA seq
DB search
MEIAEARGASKCVEKMEKEVAPQKRQYCRTTVLNVVSSLCSVASIAFCILLSINSADVKN
RVVDLEGGNGEHTFIRAPGYSMDDFNSLIDQRVDELISQRSYENFVKIRTARQASPECNC
PPGPPGKRGRRGRNGEPGPPGPPGTKGEKGDQGDQGPRMVFPKINHGFLSADQQLIKRRL
IKGDQGQAGPPGPPGPPGPPGPRGPPGDTGKDGPRGVPGLAGDPGQAGETGIMGPEGPQG
EKGFLGPPGNPGVDGLKGDVGIPGLDGVPGAKGEMGEQGEKGDMGEDGPKGDIGEKGDAG
SSAAGIKGEPGEPGRSGYKGEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPGTKGERGD
HGPQGKGERGELGPLGPKGSQGESGTPGLKGSKGENGDKGEIGSFGPKGPPGQKGDQGAT
EIIDYNGNIQEALQKITTITVTGPPGPPGPIGPAGIKGDRGMPGMPGLDGERGYKGSKGD
MGMPGASGEKGTTGLPGLPGVNGVKGDRGDSGLPGPQGSSIVGTPGSSGPHGPPGPMGPH
GFPGPKGEPGLHGVKGIRGELGHKGDRGPLGLPGASGLDGKPGIRGTDGPTGPAGPAGPK
GDIGERGASGEPGPRGPYGLPGAAGTPGLDGLQGLRGEKGDDGERGEKGFRGFKGEKGEP
GQPGLDGLDAPCQLGPDGLPMPGCWQKGVTPWLVA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgcggaggcaagaggagcatctaagtgcgtggaaaagatggagaaagaagtg
gcccctcagaagcgacaatattgccgcacgacagtgctgaacgtagtctcgtctttatgc
tcagtggcgtccatcgccttttgcattcttctgagcattaactcagctgatgttaagaac
cgggttgtggacttggagggggggaatggcgagcacacctttatccgtgctcctggctac
tccatggatgattttaattcattgattgatcaaagagtggatgagctgatctctcagcgc
tcctatgaaaattttgtcaagattcggactgcacgacaagcatcacctgaatgcaactgc
cctccaggacctccgggaaagcgaggaagaagaggccgcaatggagagcctggacctcct
ggccctccaggtaccaagggtgaaaagggggatcaaggcgaccagggaccacggatggtc
ttccctaagatcaatcatggctttctttccgctgaccagcagctcataaagcgacgactc
attaagggagatcaagggcaagctggaccacctgggccaccagggccaccgggacctcct
gggccgaggggacctccaggggacactgggaaagatggacccagaggtgtacccggtctg
gcaggtgatccagggcaggctggagaaacaggaatcatgggacctgaagggccacaaggg
gagaagggtttcctcgggcctcctggcaacccaggtgttgatggactgaagggggatgtt
ggcatcccaggattggacggtgtccccggagccaagggtgaaatgggagagcaaggtgaa
aagggcgatatgggtgaagatggaccgaaaggtgatataggggagaagggagatgcaggc
tcctctgcagcgggcatcaagggtgaacctggagagcctggacgaagtggatataaggga
gagccaggacttccagggctgcctggactcccagggataaagggtgagccaggattcctc
ggcccccagggagagccggggcttccaggacttccaggaacaaagggagagagaggcgac
catgggccacaaggaaagggtgaaagaggagaacttggaccccttggaccaaagggttca
caaggagagtctggtacacccggtctgaaaggctcaaagggggagaatggcgataaagga
gaaattggatcttttggcccgaagggcccccctggacagaaaggagaccaaggagccact
gaaatcattgactacaatggaaacattcaggaggctttacagaagattaccacaattaca
gtaacgggtcctcctggacctcccgggccgatcggaccagcgggtataaagggggatcgt
ggtatgcccggtatgcctggactcgatggagaaagaggctacaaaggttccaagggagac
atgggaatgcctggagcttcaggagagaaaggaacaaccggtttacccggcctacctggt
gtcaatggggtaaaaggggacaggggagattcaggtctgcctggtcctcaaggctcttca
atcgtcggcactccagggtcatcagggccccatggacccccaggacccatgggcccccat
ggtttccctggaccaaagggggaacctggtttgcatggtgtgaagggtattcgaggagaa
ttgggacacaaaggggatcgtggaccattgggtctcccgggagcctccggcttggacggc
aagcccggaattaggggcacggatgggcctacgggtccagccggtccagctgggccaaag
ggtgacataggtgagagaggagcatcaggtgaaccaggaccaaggggaccttatggactt
cctggagctgctggaacaccaggcttggatgggttgcagggcttaaggggagagaaaggc
gacgatggggaaagaggagaaaagggtttccggggatttaagggtgaaaagggggaacca
ggtcagccaggtctggacgggctggatgccccgtgccaattgggcccagatggattacca
atgcctggatgctggcagaagggagtcacgccatggctggtagcctga
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