Cebidichthys violaceus (monkeyface prickleback): 137875433
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Entry
137875433 CDS
T10484
Symbol
cnot6a
Name
(RefSeq) CCR4-NOT transcription complex subunit 6a isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137875433 (cnot6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cve03019
]
137875433 (cnot6a)
Enzymes [BR:
cve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
137875433 (cnot6a)
Messenger RNA biogenesis [BR:
cve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137875433 (cnot6a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137875433 (cnot6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_4
LRR_8
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
137875433
NCBI-ProteinID:
XP_068570743
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MPKEKYDPPDPRRMYTIMSTEEATNGKKSYWAELEISGRVRSLSTALWSLTHLTALHISD
NSLSRIPPDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELLLNNNQLRVLPFELGKLF
QLQTLGLKGNPLAQEIMSLYQEPDGTRRLLNYLLDNLAGAIKRSESPLSLAVLRREQELH
IASFLFPPKNPSIDIVPTEQPPARSWISLQEPDRTRASALFSVMCYNVLCDKYATRQLYG
YCPSWALNWEYRKKSIMQEIMGCNADVISLQEVETEQYYNFFLPELKEQGYEGFFSPKSR
ARTMSESDRKHVDGCAIFYKTEKFSAVQKHTVEFNQLAMANSEGSEAMLNRVMTKDNIGV
ATLLEVRKEMMEASSGKSLHGMEKQLLLVANAHMHWDPEYSDVKLVQTMMFLSEVKNIVD
KATRSLKLSSVSGEINAIPLVLCADLNSLPDSGVVEYLSTGGVDCTHKDFKELRYSDSLT
KFNCNGKTSSSNGRITHGFKLKTAYEDGLMPYTNYTFDFKGVIDYIFYSKPHLNVLGILG
PLDPHWLLENNVSGCPHPHIPSDHFSLFSQLELLLPNVPPQVNGLHLPARR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggaaaaatatgacccgccggatcccaggcggatgtacacaataatgtcaacc
gaggaggcaacaaacgggaagaagtcatactgggctgagctggaaatcagcggccgagta
aggagtctcagcacagccctctggtctctcacccatcttactgccctgcacattagtgac
aactcactgtcacgcatcccgccagacattgccaaactacacaacctggtgtacctggat
ctctcatccaataagatcaggagcctgccggcagagctcggcaacatggtatctctcagg
gaactgcttttaaataacaaccagttgcgagttctgccatttgaattggggaaactgttt
cagttacaaacactggggttgaaaggaaacccacttgcacaagaaattatgagcctctac
caggaacctgatggcacgcggagactgctcaactacttgttagacaatctggcaggggct
atcaagcgcagtgagtcccccctctctctggcagttctgaggcgggaacaggaattgcat
attgccagttttttattccccccaaaaaatccatcaatagatatagtaccaacagagcag
cctccagcccggtcatggatttcactccaggaaccagaccgaacacgggcctcagcactg
ttctccgtgatgtgctacaatgtgctgtgtgataagtatgccacacgtcagctatacggc
tactgcccctcttgggctctaaactgggagtacaggaagaaatccatcatgcaggagata
atgggctgcaatgcagacgtcatcagtttgcaggaagttgagacggagcagtactacaat
ttcttcttgcctgagctgaaggagcaggggtacgaaggcttcttcagtccaaagtcacga
gccaggactatgtctgagtctgaccgtaaacacgtggatggttgtgcgattttctacaaa
acggaaaaattcagcgcggtgcagaagcacacagtggagttcaaccagctggccatggct
aactccgagggctcggaggctatgctgaacagggtgatgaccaaggacaacatcggcgta
gcgacgctgctcgaggtccgcaaagagatgatggaggcctcctctggaaagtcactccac
ggcatggagaagcagctgctcctggtggccaacgcccacatgcactgggacccggaatac
tctgacgtcaagctggtccagaccatgatgttcctgtcggaggtgaagaacatagtggac
aaggccacacgcagcctcaagttgtcctctgtctctggggagatcaacgccattccactg
gtgctgtgcgctgacctcaactccttgcccgactctggcgtggtggagtacctgagtact
ggtggggtggactgcacccacaaggacttcaaggagctccgttacagcgacagcctgacc
aaattcaactgcaacggcaagaccagttcgtccaacggcaggatcacccacggcttcaag
ctgaagaccgcttacgaggacggcctgatgccttacaccaactacaccttcgacttcaag
ggtgtcatcgactatattttctactccaagcctcacctgaacgtgctgggtatcttgggc
cccctggacccccactggctgttagagaacaatgtcagcggctgcccacacccccacatc
ccctccgaccacttctccctcttcagccagctggagctcctcctgcccaatgtgcccccc
caggtcaacgggctccacctgcccgcacgcaggtag
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