KEGG   Cebidichthys violaceus (monkeyface prickleback): 137875825
Entry
137875825         CDS       T10484                                 
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
cve  Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03013  Nucleocytoplasmic transport
cve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137875825 (thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    137875825 (thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cve03019]
    137875825 (thoc3)
   03041 Spliceosome [BR:cve03041]
    137875825 (thoc3)
Messenger RNA biogenesis [BR:cve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     137875825 (thoc3)
Spliceosome [BR:cve03041]
 Complex C
  Other components
   EJC/TREX
    137875825 (thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    137875825 (thoc3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_Vps41 Beta-prop_IFT122_1st eIF2A Beta-prop_WDR36-Utp21_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_TEP1_C WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_HPS5 WDR90_beta-prop_4th Tricorn_2nd Beta-prop_ACSF4 B-prop_COPA_B_2nd Beta-prop_WDR75_1st PD40 Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_NWD2_C WD_LRWD1 Cytochrom_D1 Beta-prop_WDR11_1st Beta-prop_ELP1_1st Beta-prop_SCAP DPPIV_N Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 137875825
NCBI-ProteinID: XP_068571428
LinkDB
Position
Unknown
AA seq 322 aa
MASQYYAEMQESFRNNNKSREFPAHTAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL
VKENNYRGHSDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKTHRSRAEEQFKFEVNEISWNNDNDMFFLTNGNGCINVL
SYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWNVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCDSPTFTVAWHPKRPLLAYACDDK
EGKYDNNREAGTVKLFGLPNDS
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcgtcgcagtactacgcggagatgcaggagagcttcaggaacaacaacaagagccga
gagttcccggctcacacggccaaagtacactcggtcgcgtggagctgcgacggacggagg
ctcgcgtccggctcgttcgataagaccgcgagcgtgttcgtcctggagaaggaccggctg
gtgaaggagaacaactacagaggccacagcgacagcgtggatcagctctgctggcatcca
accaacccggacctcttcgtcacagcgtccggagacaagaccatccgtatatgggacgtc
cggaccaccaagtgcatcgccaccgtcaacacaaagggagagaacatcaacatctgctgg
agccctgacggtcagaccatcgctgtgggtaataaggacgacgtggtgacgttcatcgat
gctaagacgcaccgatccagagcggaggagcagttcaagttcgaggtgaacgagatctcc
tggaacaacgacaacgacatgttcttcctcaccaacggcaacggctgcatcaacgtcctg
agttacccggagctgaagcccatccagtcaatcaatgctcacccgtctaactgcatctgc
atcaagttcgacccgacggggaaatacttcgccacaggaagcgccgacgctctggtgagc
ctgtggaacgtagaggagctggtgtgtgtccgctgcttctccaggttggactggcccgtc
aggacgctgagcttcagccacgacgggaagatgctggcctcggcctccgaggatcacttc
atcgacatcgcagaggtggagacgggagagaagctgtgggaggtccagtgcgactctccg
accttcacggtggcctggcacccgaagaggcctctgctggcgtacgcctgcgacgacaag
gagggcaagtacgacaacaaccgggaggccgggaccgtgaagctgttcggtctccccaac
gactcctga

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