Cebidichthys violaceus (monkeyface prickleback): 137876291
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Entry
137876291 CDS
T10484
Symbol
rad50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03440
Homologous recombination
cve03450
Non-homologous end-joining
cve04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137876291 (rad50)
03450 Non-homologous end-joining
137876291 (rad50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
137876291 (rad50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cve03032
]
137876291 (rad50)
03400 DNA repair and recombination proteins [BR:
cve03400
]
137876291 (rad50)
DNA replication proteins [BR:
cve03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
137876291 (rad50)
DNA repair and recombination proteins [BR:
cve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
137876291 (rad50)
BRCA1-C complex
137876291 (rad50)
NHEJ (non-homologous end-joining)
MRX complex
137876291 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
SMC_N
ABC_tran
AAA_29
AAA_16
AAA_22
AAA_13
Motif
Other DBs
NCBI-GeneID:
137876291
NCBI-ProteinID:
XP_068571837
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSKIDKMSILGVRSFGIEDKDKQVISFFTPLTVLVGPNGAGKTTIIECLKYATAGELPPG
SKGGAFVHDPKDAHETDVRAQIRLLFTDVNAEKVTIHRSMSCTQKAKNYTFKSLEQVITR
IKDGEKVSLSSKCGELDREMISSLGVSKPVLNHVIFCHQEESNWPLSEGKALKDKFDSIF
AATKYIKALETMRQLRLKQTHTVKECQVELRYLKQNKEKAQQIRETVATKEAQLMASRDS
IQQIEGQIDPLENRMNDIDIKLGKVMKLDNDIKALDSRKKQMEVDNKELEETMEQVFQGS
DEQLQEIYQNHQRTVREKERRLTDCQKELERAGRECQRLNRVKADLLVEQGRLQLEADRH
TQNIKNRDTQVRSLSSYLEMEGYDRPPFTSLQLESFHRHVTQRLEQEKATVSQVLADLQE
KEQQKQQSIDEMRDKKTGLERTVELKRDMQGKKQQELRNIRAELQRLEGSSSRLQELENE
LAKVERELQSVLQSSNVEELKAEVVELQREKAELDCTQRKLDQEMEMLNTHTTARTQMDM
LKKDKTEKEEQVRKIKSRHSEELVSLLGHFPNKRELEDWIYGKSKEINSTRNRLAKLNKD
LASSEQNKSHIAAEVRKKEQQLASDEEKFFNVCGSQDLEQDLGKLREDLEKISKQRAMLA
GATAVYTQFISQLTEEREPCCPVCQRTFPSDSDLHDVISDMQSKLRLVPDKLKNTEHDLN
RKEQKRDEMMALRPVRQSIVQFQEKELPELRNRLQTVNREIERLKGDVEEQESLLGTRMS
QEETAKACLQDISLMDRYLMDLKELERKIAQQAAKLQGLDLTRTIQQVSQEKQETQHKLD
TTSSKMELKRKLIQDQQDQIQMLKSAVNETRAEKLQLSSDLQKQQQLEEQCVEFTTEIQS
LTRDIREAKEQLSPLSAALEKLQQEKQELVERKRQRQEEGQEKIGTIKERVKAITTLERD
ITKYVDDGKDEYKEQKEAELQETNTQLHEAEKHKEKINKEMGNVRQDIDTQKVQERWLQD
NLTLRKRVEELKEVVAKHEALMKDMGNMQVLQLRQERRETERKLEEMKKNRSIALGRQKG
FEEEILHHRKELREDQYDKADERHKNKMITMRTTEMVIKDLDLYYKALDQTIMKFHSMKM
DEINKIIRDLWRNTYRGQDIEYVEIRSDVDENASAGVKRRVYNYRVVMVKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRDNIESLAHALVEIIKSRSRQR
NFQLLIITHDEDFVELLGRSSYIEHFYRIRKNQDQNSEITKCSITSLSSYLH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagatagataagatgagcatcctaggggtgaggagctttgggattgaggataaa
gacaagcaggtcatttccttcttcactccgctgaccgtgctggtgggacccaacggagca
gggaaaacgactattattgagtgcctgaagtacgcaacagcaggagaacttccccccgga
tctaaaggaggtgcatttgttcatgatccaaaggacgcccatgagacggacgtgcgagcg
cagattcgactcttattcaccgacgtcaacgcagagaaagtgacgatccatcgctccatg
tcctgcactcagaaggccaagaactacaccttcaaaagcctggagcaggtcattaccagg
ataaaggacggtgagaaggtgagcttgtcatcaaagtgtggagaactggatcgggagatg
atttcttcactgggtgtgtcgaagcccgtgctcaatcatgtcatcttttgtcaccaagaa
gagtccaactggccactcagcgagggcaaagcactcaaagacaagttcgactccatcttc
gctgcaaccaagtatatcaaagctctggagacgatgcgccagctgcgtctgaaacagact
cacacggtcaaagagtgtcaagtggagttacgctacctgaagcagaacaaggagaaagcc
cagcagatcagagagacggtggccaccaaggaggcccagctgatggcctctagagacagc
atccagcagatagagggccagattgatccactggagaatcgaatgaatgatattgacata
aaactggggaaagtgatgaagctggacaacgacatcaaagctttagacagcaggaagaaa
cagatggaggtggataacaaggagctggaggaaaccatggaacaggtgttccagggttca
gacgagcagctgcaggagatttaccagaaccaccagaggactgtgagagagaaggagcgg
aggctgacggactgccagaaggagctggagagagctggacgggagtgtcagagactcaac
agagtcaaggccgatctcctggtagaacaaggtcgtctacagctggaggctgaccgccac
actcaaaacatcaagaaccgagacactcaggtccgctctttgtcgtcctacctggagatg
gagggttacgaccgaccacccttcacttcccttcagctggagagcttccaccgtcacgtc
acgcagagacttgagcaggaaaaagcgacagtcagtcaggttctggcggacctgcaggaa
aaggagcagcagaagcagcagtccatcgatgaaatgagggataagaagactggcctggag
agaaccgtggagttgaagagagacatgcagggaaagaagcagcaagaactgaggaacatc
agggcagagctgcagaggctggagggttcgtctagccgtctgcaggaactggagaacgaa
ctggctaaagtggagcgtgagctacaaagtgtacttcagagctccaacgtggaggagctg
aaggcagaggtggtggagctgcagagagaaaaggctgaacttgactgcacacagagaaag
ctcgaccaagagatggagatgctcaacacacacactactgcacgcacccagatggacatg
ctgaaaaaggacaagacagagaaggaggagcaggttcgtaagatcaagtctcgtcacagc
gaggagctggtgtcgttgctgggccactttcccaacaagagagaactggaggactggatc
tatggcaaatctaaggaaatcaacagtaccaggaacagacttgccaaactcaataaggac
ctggcatcgagtgagcagaataaaagccacatcgctgctgaggtgcgtaagaaggagcag
cagttagccagcgatgaagagaagttcttcaacgtgtgcggcagtcaggatctggagcag
gacctgggcaaactacgagaagatctggagaagatctccaaacaaagagccatgctagct
ggagccacagcggtgtacacccagttcatcagccagctgacggaggagagagagccctgc
tgccccgtgtgccagcggaccttcccctcagactccgatctgcacgacgtcatcagtgac
atgcagtccaaactacgcctggtgccagacaagctgaaaaacacagagcatgacctgaac
aggaaggagcagaagagagatgagatgatggctctcagacctgtcaggcagtccattgta
cagtttcaggagaaggagttgcctgagttgagaaaccgcctgcagactgtaaacagagaa
atcgagaggctgaagggcgacgtggaggagcaggagagtctgcttggtacccggatgtca
caggaggaaacagccaaggcctgcctgcaggacatatctctcatggacagatacctgatg
gaccttaaagagttggagaggaaaatagctcagcaggcagccaaactccagggattggac
ctgaccagaaccatccagcaagtcagtcaggagaaacaagagactcagcacaagctagac
accacctctagcaagatggagctgaaacggaagctgatccaggaccagcaggaccagatt
cagatgctgaaaagtgctgtgaatgagaccagagcagagaaactccagctgagcagtgat
ctgcagaaacagcagcagctggaggagcagtgtgttgagttcaccactgaaatacagtcc
ttaaccagggacatcagggaggcgaaagagcagctgtcccctttgtctgctgctctggaa
aagctgcaacaggagaagcaggagctggtggagcgcaagaggcagaggcaggaagagggg
caggagaagatcggtaccattaaagagagagtgaaggcgatcaccaccttggaaagagac
atcaccaaatatgttgatgacggcaaagatgaatacaaagagcaaaaagaggctgagctt
caagaaaccaacactcagctccatgaggcggagaagcacaaagagaagatcaacaaggag
atgggaaacgtccgtcaggacatagacactcaaaaggtccaggagcgctggttgcaggac
aacttgactttgaggaagcgtgttgaggagttgaaggaggttgtggctaaacacgaggct
ctaatgaaagacatgggcaacatgcaagtgttgcagctacgccaagaacgacgtgaaaca
gaacgcaagttggaagagatgaagaagaaccgcagtattgcactgggtcgtcaaaagggg
ttcgaggaggagatactgcatcacagaaaagagctgcgagaagatcagtatgacaaagct
gatgagcgccacaaaaacaagatgataaccatgaggacaacggagatggtgattaaagac
ctggatctctactacaaggcccttgatcaaaccatcatgaaattccacagcatgaagatg
gacgagatcaacaagattatcagagatctatggcgcaacacctacaggggtcaagacatc
gagtacgtggagatcaggtctgatgtggacgaaaacgcgtcggctggagtcaagcggagg
gtttacaactacagagtggttatggttaaaggagacacggcattggatatgagaggacgc
tgcagtgccggacagaaggtgttggcgtccctgatcattcgtctagctctggccgagacc
ttctgtctgaactgtgggatcctggccctggacgagcccaccaccaacttggaccgagac
aacattgagtcactggcacatgccctcgtagaaatcatcaagagtcgctcgcgccagcgc
aacttccagctgctgatcatcacccacgacgaggacttcgtggagctgctggggcggtcc
agctacattgagcacttctaccgcatccgcaagaaccaggaccagaactctgagatcaca
aagtgcagcatcacctccctctcttcctatctccactga
DBGET
integrated database retrieval system
