Cebidichthys violaceus (monkeyface prickleback): 137876595
Help
Entry
137876595 CDS
T10484
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03013
Nucleocytoplasmic transport
cve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137876595 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
137876595 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cve03019
]
137876595 (thoc2)
03041 Spliceosome [BR:
cve03041
]
137876595 (thoc2)
Messenger RNA biogenesis [BR:
cve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137876595 (thoc2)
Spliceosome [BR:
cve03041
]
Complex C
Other components
EJC/TREX
137876595 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137876595 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
137876595
NCBI-ProteinID:
XP_068572415
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MATLILPGEWIKNWEKSGKHEFVQLCKELTEKTDHGSEIRDIQAALYELCWQVVQGNLKL
DLVVSVLGDMMELRDDMPSILADVFSTLDLETAALEEKVKRDHYTQLVGACLFFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDIYVHLMPVDATIVEEHKRDISE
AKQIARKLVMVVLPSEKSEDKDKEKEKEEEKNDKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYATSHKAIALALCQLVHLTVEPLYRRAGLPKGARGCVMHPLRNKRAPRPAESFE
DLRRDTFSMICYLGPHLSHDAILFAKIVRLGKAFMKEYQSDGRSDVKDKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYRHRYRLYGQWKNETYTSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHSAYEREVNKL
KVQIKAIEENPEIPMNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAIYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPANQQNGPG
STGKPATSTSKMEEGTSEDGDRGKDKSQGTTKPVNKANSAAAKVTTSNGNGALNSTKAVK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERVAREGKEKTPKADRE
KAKAEEKSSKDDKAKAGNGEPMEPSRERDAIKESKSKEKGDRSAVAGSLKSPVPRLESAE
SERDHKRRKLDSHSSPSHSSSVKDNSNEPKESTSKHHANYNSVTRSKSRERETEKKDSDN
TQGRSKEKKEEKDRKERKRDHAVNELETSQESKRRKDENGMNSSKNSKSDSPSCDSPLSA
EKEKIKRSKSSSKEKADSVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccctggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gagtttgtacaactctgcaaagaactcaccgagaaaacagatcatggaagtgagattaga
gatatacaggcagctttatatgagctctgctggcaagttgtacaggggaacctgaagttg
gatctggtcgtcagcgtccttggggacatgatggagctccgagatgacatgccatcaatt
ttagcagatgtgttcagtacactagatttagagactgctgcactggaagaaaaagtcaaa
cgtgaccattacacacaactggtgggagcttgtttgttttttgttccggaggccatcctg
aaagagaggctggacccagaaacccttgaatctctgggacttataaaacaagctcatcag
ttcaatcagaagattgtaaaaatcaagactaaactattttacaagcaacagaagtttaac
ttgctaagggaggagaatgagggctatgccaaactcatcaccgagctcggccaagacctc
tcgggcaacatcaccagccaccttgtcctggagagcatcaagtccctcataggatgtttc
aacttggaccctaatcgtgttttggacataatcttggaggtgtatgagagtcgatctgac
caagatgagttcttcctgtctctcatcaaatcctacatgtgtgagccactcaccctttgc
cacatcctgggttttaagttcaaattctaccaggagcccaatgaggaaacccccaagtca
ctttaccacattgctgctgctctgcttcaccataacctgattgagctggaagatatctac
gtacatcttatgccagtagatgccaccatcgtagaggaacacaaacgggatatctcagag
gccaagcagatcgcccgcaagctggtcatggttgtgttgccctcagagaaaagtgaagac
aaagacaaggagaaagaaaaggaggaggagaagaatgataagccacctgataaccagaag
cttggtctgttggaagcgctgcttagaattggagactggcaccacgcccagagtattatg
gaccagatgccgtccttctatgctacttctcacaaggccattgcgctggctctctgccag
ctcgtgcatctgactgtggagcctctttacagaagggctggcctcccaaaaggggcgaga
ggatgtgtcatgcatccactgaggaacaagcgggcccctcgccctgcggagagcttcgag
gacctacgcagggacacgttcagcatgatctgctacctgggccctcatctctcccacgac
gctattctttttgccaagattgtgcgtctgggcaaggccttcatgaaagagtaccaaagt
gatggcagatctgatgtcaaagacaaaatggaaacactcttgagttgcttcctgagcatt
gcagaccaggtgctactcccttccctctctctgatggagtgtaatgcttgcatgtctgag
gaactgtggggtctcttcaaactctttccctaccggcacaggtaccgattatatggacag
tggaagaatgagacgtataccagccatccactgttggtcaaagtcaaagctcaaactgta
gaaagggccaaatacattatgaagcggttgaccaaagagaatgtgaaacaatctggaagg
cagattggcaaactgagccatagcaatcccacaatcctctttgattatatgctttctcag
atccaatggtacgacaaccttatcgttccagtggtggattccttgaaatacctcacatcc
ctcaactatgatgtcttggcctattgcatcattgaggctctggccaatcctgagaaggag
aagatgaagcatgacgacactaccatctcctcgtggcttcaaagcctggcgagtttgtgt
ggagccgtgttcagaaaatacccaattgagttggctggccttcttcaatacgtcaccaat
cagctaaaagcaggaaagagttttgacctgttgatcctaaaggaggtggtgcagaaaatg
gctggcatcgagatcacagatgagatgacctcagagcagttagaggccatgactggaggg
gagcaactcaaagctgagggtggctactttggccagatcaggaacactaagaagtcatca
caacgtctgaaggatgcactgctggaccacgaattggccttgcctctgtgtttactcatg
gcccagcaacgaaacggtgttgttttcttagagggtggagagaaacacctcaaacttgtt
ggccacctgtacgaccagtgtcatgacaccttggtgcagtttggtggctttctggcctcc
aaccttagcacagaggactacatcaagcgggttccctccattgacatcctttgtaaccag
ttccacactccacatgatgctgccttctttctgtccaggccaatgtacgcccatcagatt
ttgtctaagtacgatgagttgaagaaagcagagaaaggcaaccggcagcagcagaaggtc
cacaagtatgtggcagcctgtgaacaggtgatgacacccgtgcatgaagcagtagtgtca
ctccatccagccagggtctgggatgacctccgcccccagttctacgctaccttctggtcc
ctcaccatgtacgacctggccgttccacattctgcctacgagcgtgaggtcaacaagctc
aaggtccaaatcaaggccatcgaggagaatccagagatacccatgaataagaaaaagaag
gagaaggagcgctgcactgccctgcaagaaaaactgcaggaggaggagaagaaacagctg
gagcacgtccaaagggttctacaccgcctcaaactggagaaagacaactggttgttggcc
aaatctacaaagaatgagaccataacaaagtttctgcagctctgtctgttcccccgctgc
atcttctcatccatcgacgccgtgtactgcgcgcgcttcgttgagctggtccaccagcag
aagacgcccaacttctgcaccctcctgtgctatgaccgggtgttctccgccatcatttac
actgtagccagctgtacggaaaatgagtctcaccgctatggacgcttcctctgctgcatg
ctggagacggtgacccgttggcacagcgaccgtgcaatctatgagaaggagtgcgtcaat
taccccggcttcctgaccatcttcagagccacaggcttcgatggcgggaacaaagcagat
cagctggattatgagaacttcaggcatgtggtgcacaaatggcactacatgctgactaaa
gcctcagttcactgcctggagacgggagattacacccacatccgcaatattctcatcgtg
ctcaccaagatcctgccctgctaccccaaagtcctgaatctgggccaagcgctggagtgt
cgtgtccacaagatctgcctcgaggagaaggataagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggtgcacatggtcccagagaatgagttt
caccacaaggagcagccagcccgcagtgccacccccgccaaccaacagaacggtcccggc
agcacaggcaagcctgccaccagcacaagcaagatggaggaggggacgtcagaggatggt
gatcggggcaaggataaatctcaggggaccacaaagccagtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaacgggaacggtgctctcaacagcaccaaagccgttaaa
gaacgggacgacaaagagaagagtgggaaggagaaaaaagagaaaaaggagaagacgcca
ggcagcactcccgagacgaaggcagagaaccgtcgggagaagcagagagacgagagagca
gggaaggaggagcgggtggcacgcgagggtaaggagaagacccccaaggcggaccgggag
aaggcgaaggccgaggaaaagagcagcaaagacgacaaggccaaagccggcaacggggag
cccatggagccgtccagggagcgcgatgccatcaaggagtccaagagcaaggagaaagga
gacaggagtgcagtggctgggtccctaaagtcaccagttcccagattggagtcagctgaa
tctgagagggatcacaaaagacgaaagctcgacagtcactcttctccgtcccactcctcg
tctgttaaggacaatagcaacgaacccaaggagtccacatccaagcaccacgccaactac
aattcagttacccggtccaagagcagagagagggagacggagaagaaagattcagacaac
acacaaggccgatccaaagagaagaaggaagagaaggatcggaaagagaggaagagagac
catgctgtcaatgagctcgagacgagccaagagtccaaacgtaggaaggatgagaatgga
atgaattcctccaaaaacagcaagagtgacagtccttcctgtgactccccgctttcagct
gagaaagagaagatcaagagatccaaatcttccagtaaagagaaggcggactccgtgaaa
cctgagcggacttcctctggaggcaaaaaggagtccagacacgacaaagagaaatctgaa
aagaaggagaagagggacagcagcggaggaaaagaagagaaaaagcatcataaatcctct
gacaagcacagataa
DBGET
integrated database retrieval system
