Cebidichthys violaceus (monkeyface prickleback): 137878177
Help
Entry
137878177 CDS
T10484
Symbol
ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137878177 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cve03041
]
137878177 (ddx5)
03009 Ribosome biogenesis [BR:
cve03009
]
137878177 (ddx5)
Enzymes [BR:
cve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137878177 (ddx5)
Spliceosome [BR:
cve03041
]
Complex A
U1 snRNP components
U1 related factors
137878177 (ddx5)
Complex B
137878177 (ddx5)
Ribosome biogenesis [BR:
cve03009
]
Eukaryotic type
Pre-60S particles
Helicases
137878177 (ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
137878177
NCBI-ProteinID:
XP_068574452
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MPGYSDRDRGRDRDRGYGGGGGPPRFGGNRGGGGGGGGGGKFGNPGERLRKKQWNLDELP
KFEKNFYQQHPDVARRSPQEVEQYRRTKVITFKGRECPNPIAKFHEAAFPSYVMDVINKL
NWSEPTPIQAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLV
LAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFL
ESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAED
FLKEYVQINVGALQLSANHNILQIVDVCNDGEKENKLIRLLEEIMSEKENKTIIFVETKR
RCDDLTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKF
VINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQASDLISVLREANQAINPKLL
QMAEDRGGRSRGGRGGDYRDDRRDRYSGRRDFGSFRDRDNGRGFDNGPNKAFGTNTQNGG
YGGGNNSSGGNGFTGGSYNGNGQSSFSNQTAAFTGQNFQAQQFALPKGGAQTGASHPPFP
FPQAQAPQQHPPPLVPYPMPPQFSQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattccgacagagaccgcggcagggatagagatagaggctatggcggcggc
ggcggtcctcctcgctttggagggaaccgtggcggcggcggtggaggaggagggggagga
aagttcggcaaccccggtgaacgactgcggaagaaacaatggaacctggacgagctcccg
aagtttgagaaaaacttctaccaacagcatcccgatgttgccaggaggtctccgcaagaa
gtcgaacaatacagaaggaccaaagtaattacatttaaggggagagaatgcccaaatcct
attgccaagttccacgaggccgcctttccatcttatgtcatggatgtgatcaacaaactg
aactggagtgaaccaacacccatccaggctcaaggctggcccctggccctcagtggcaaa
gatatggtcggcattgcacagactggctctggcaagacgctttcctatttgctgcctgca
attgtgcacatcaaccaccagcctttcctggaacgtggagacggccccatttgcttggtg
ttggccccgacccgtgagctggcacagcaggtgcaacaggtggctgcagaatacggcaga
gcttctcgcctgaagtccacctgtatttacggaggagcacccaagggaccccagatccgt
gacctggaaaggggtgttgagatctgcatcgccactccagggaggctcattgacttcctt
gagtcaggaaaaacaaacctccgcagatgcacttatcttgtgctggacgaggccgacaga
atgctcgacatgggatttgaacctcaaatccggaaaattgttgaccaaatcagacctgac
cgccagactctgatgtggagtgccacttggcccaaagaggttcgtcagctggcagaggat
ttcctgaaggagtacgtccagatcaatgttggagccctgcagctcagtgccaaccacaac
atcctgcaaatcgtggatgtctgtaatgatggagagaaggagaacaaactcattcgtctg
cttgaggaaatcatgagtgagaaggagaacaagaccatcatctttgtagagacaaagagg
cgctgtgatgatctcaccaggaggatgagaagggatgggtggccagctatgggaatccat
ggagataaaagccagcaggaaagagactgggttctcaatgagttcaaatatggaaaggct
ccgattctcattgctacagatgttgcctctagaggtctagatgttgaagatgtgaaattt
gtcatcaactttgactaccccaacaactctgaggactatatccaccgcattggcagaaca
gctcgtagccaaaagacaggcacggcttacaccttcttcactccaaacaacatgaggcag
gccagtgacctcatctctgtgctccgcgaggccaaccaggcgatcaaccccaagctcctc
caaatggcggaagacagaggaggtcgttcaaggggaggcagaggtggtgactacagagat
gaccgtcgggataggtattctggaaggcgtgatttcggcagttttagggaccgggataat
ggtagaggttttgacaacggaccaaataaagcctttggcacaaatacgcagaatggaggc
tatgggggcggcaacaacagcagcggcggcaacggcttcactggaggcagctacaatggt
aatggacagtccagctttagcaaccaaactgcagccttcacaggccagaatttccaggcc
caacagtttgctctccctaagggtggcgcacagactggtgcgagtcaccccccattcccc
ttcccccaggcacaggctcctcagcagcatcctccaccgctggtgccgtaccccatgcct
cctcagttctctcagtaa
DBGET
integrated database retrieval system
