Cebidichthys violaceus (monkeyface prickleback): 137878445
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Entry
137878445 CDS
T10484
Symbol
xab2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137878445 (xab2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cve03019
]
137878445 (xab2)
03041 Spliceosome [BR:
cve03041
]
137878445 (xab2)
Messenger RNA biogenesis [BR:
cve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137878445 (xab2)
Spliceosome [BR:
cve03041
]
Complex B
Other components
Prp19-related factors
137878445 (xab2)
Complex C
137878445 (xab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_2
Suf
TPR_12
TPR_8
TPR_15
TPR_16
ARM_TT21_C
ARM_TT21
NRDE-2
TPR_MalT
SNAP
TPR_1
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
137878445
NCBI-ProteinID:
XP_068574850
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MPSLNGKPDVMFEDDDLPYEEEIIRNPYSVKCWMRYIEFKQNGAKSTLNMIYERALKELP
GSYKLWYNYLRERRKQIKGKCVTEPGYEEINNCHERALVFMHKMPRIWLDYCQFLVSQCK
ITRSRQTFDRALRALPVTQHPRIWPLYLRFVRNLPLPETAIRVYRRYLKLSPENAEEYID
YLRSVGRLDEAAVRLAAVVNDESFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIR
GGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEES
MIAAKMETTAEMGKDEDEDIDMELRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVK
LYEGNPRQIINTYTEAVQTIDPMKATGKPHSLWVSFAKFYEENEQLDDARTIFEKATKVN
YKQVDDLAAVWCEYGEMELRHENYEQALRILRKATAIPSKKAEYFDVSEPVQNRVYKSLK
VWSMLADLEESLGTFQSTKAVYDRIIDLRIATPQIIINYAMFLEEHNYFEESFKAYERGI
ALFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEG
YGLARHAMAVYERATQAVDTVERHHMFNIYIKRAAEIYGVTYTRAIYQKAIEVLPDEHAR
DMCQRFADMESKLGEIDRARAIYSYCSQICDPRVTANFWQAWKEFEIRHGNEDTIREMLR
IKRSVQATYNTQVNFMSSQMMKATTSSTGTVSDLAPGQMGIDDMKMLEQKAQLLAAEAEQ
DKPKPKEKILFVRSDTSRSELAELSKRANPDEIDIDDDDEDEGDEDQGPEEVQLEQKSVP
TAVFGGLKED
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactaaacggaaaacccgatgttatgttcgaggacgatgatctgccgtacgaa
gaggagatcatcaggaacccatactcggtcaagtgctggatgcgttacatcgaattcaaa
cagaatggagccaaatccaccctcaacatgatctacgagcgcgctctgaaagagctgcct
ggcagctacaagctgtggtacaattatctgagagagagacggaaacaaatcaaagggaaa
tgtgtcactgaaccaggatatgaagagatcaataactgccatgaaagagcattggtgttc
atgcataagatgcccagaatatggcttgattactgccagttccttgtatctcaatgcaag
atcacaagaagccggcaaacattcgaccgggcactcagagctcttcctgttactcagcac
ccacgtatctggcctctgtatctccgctttgtccgtaaccttcccctgcctgagacagca
atccgagtgtaccgcaggtaccttaagctttctccagaaaatgcagaggagtacatagac
tacttacggtctgttggccgcttggatgaagcagctgtgcgactagcagctgttgtcaat
gacgaaagctttgtgtccaaagagggcaaatcaaactatcaactgtggcatgagctgtgt
gacctgatctcccagaaccctgataaagtgacgtcactcaatgtaggggccatcatccga
ggaggcctcactcgcttcacagaccaacttggaaaactctggtgctctttagccgactat
tacattaggagtggtcactttgagaaggcccgtgatgtgtatgaggaggccatccttaca
gtggtaacagtacgggatttcacacaagtgtttgacagctatgcccagtttgaggagagc
atgatcgcagcaaagatggagaccacagctgagatggggaaggatgaagatgaggacata
gacatggagctcagactggcccgctttgagcagctgatagcccggcggcccctcctgttg
aacagtgttctactgcggcagaaccctcataatgttcatgagtggcacaagcgggtaaaa
ttgtatgagggcaacccacggcagattatcaacacatacactgaggcggtgcagactata
gatccaatgaaggccacagggaagcctcactctctctgggtttccttcgctaaattctat
gaggaaaatgagcagctagatgatgccaggaccatttttgagaaggctaccaaggtgaac
tacaagcaggtggatgaccttgctgcagtgtggtgtgaatatggagagatggagctacgc
catgagaactatgaacaggcactgcgcatactgaggaaagctacagcaatcccatccaag
aaggcggagtactttgatgtatctgagccggtccaaaaccgagtttacaagtctttgaag
gtctggtccatgctggcggacctggaggagagtctcggcactttccagtctaccaaagca
gtttacgatcgcatcattgacctccgcatcgccacgccgcagatcatcatcaattatgcc
atgttcctcgaagagcacaactactttgaggaaagcttcaaagcatacgagcgcggtatt
gctctcttcaggtggccaaatgtttatgacatctggaacacttacctcaccaagttcatt
gatcgttatgggggcaagaagctggagagagccagagatttatttgaacaagccctggat
ggctgccctgccaagtttgccaagaccatttacctgttgtatgccaaattggaggaggga
tatggattagcacgacacgccatggctgtctatgaaagagcaacgcaggcagtagacact
gttgagagacatcacatgttcaatatctacatcaagagagcagcggaaatttatggagtc
acgtataccagagccatttaccagaaagctatcgaggtccttcctgatgagcatgcaagg
gacatgtgtcagcgatttgctgacatggagagtaaacttggtgagattgatcgggccaga
gcaatctactcctactgctcgcagatttgcgacccgcgggtgactgcaaatttctggcag
gcctggaaagaatttgagatccgccatggaaatgaggacacgatcagagaaatgctgagg
atcaaacgtagtgtccaagccacatacaacacccaggtcaactttatgtcctctcagatg
atgaaggcaacaacaagctccacaggcactgtgtcagatcttgctccaggccaaatggga
atcgatgacatgaagatgctggagcagaaagcacagctgcttgctgcagaggccgagcag
gacaaacctaagcccaaagagaagattctcttcgtcaggagtgacacctctcgcagcgag
ttggctgagctgtccaaacgagccaatccggatgagattgacattgacgatgatgacgag
gatgaaggtgatgaagaccagggaccagaagaggtgcagcttgaacagaagagtgtcccc
acggccgtctttggaggccttaaagaggactaa
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