Cebidichthys violaceus (monkeyface prickleback): 137878542
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Entry
137878542 CDS
T10484
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03440
Homologous recombination
cve03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137878542 (top3a)
03460 Fanconi anemia pathway
137878542 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cve03032
]
137878542 (top3a)
03400 DNA repair and recombination proteins [BR:
cve03400
]
137878542 (top3a)
Enzymes [BR:
cve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
137878542 (top3a)
DNA replication proteins [BR:
cve03032
]
Eukaryotic type
DNA Topoisomerases
137878542 (top3a)
DNA repair and recombination proteins [BR:
cve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
137878542 (top3a)
FA (Fanconi anemia) pathway
137878542 (top3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
137878542
NCBI-ProteinID:
XP_068574981
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MLVHLLRRSLLRSGLQRLGVQRRGFCAAQSDRCPGTPQQADMIRSRAQIKRVLCVAEKND
AAKGISEIMSGGTSRRREGMSKFNKIYEYEYHLFGQNVTVTMTSVSGHLLGLEFKAQFQK
WHSCNPVLLFDAEVEKHCPDNMKQIKRTLEKEARQCQALVIWTDCDREGENIGFEVIDVC
KAVKPNLQVFRAKFSEITPNSIRRACETLIEPDANVSDAVDVRQELDLRIGASFTRFQTL
RLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVDEDTVEFN
WKRNRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVELEKLASRKLRISA
KETMKIAEKLYTQGYISYPRTETNIFPTTLALGPLVEQQTQSPVWGMFAQQVIEQPGGPN
PRQGKKSDQAHPPIHPTKYSGGLQGNEGRVYEFIVRHFLACVSQDALGQETVVDIDIAQE
NFSTSGLMIIAKNYLDVYPYDRWSAKVIPVYEQGSQFRPSAVEMVDGQTSPPQLLTEADL
ISLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPN
LRAELEADLKLVSEGRKDKQNVLQNHIQKYKTVFIESVRKAKKLDEALSPYLGAAQEIAE
VEQQDMEMPLPVRKCPHCRRDMVLKKKREGNSRYLSCTGYPACKTAVWFPDTVLEVSRDD
SICPTCQPHPVHMLKFKFRRGSLPPMMPLEFVGCIGGCDETLREVLDLKYLRAGGGGVGG
GGGGGGGGGGGGRGDDPRPPAPRPPRPEHPGPPRSNPRPSLPPVPSWTPQPRPPAGGGGG
GVYSSSDAVVCNCGQDAVLLTVRKDGPNQGRQFYKCNAGSCNFFLWADQPSQQGEPQGRG
PPLQAPPRLSVGFRNTPGGGGGGGGQAGGAGGHAGQMMCNCNEAAVMRTVQKDGPNKGRM
FHTCGKPRDQQCGFFLWADENEPPPGVFGGGFNGDGDAGKKGRRTMGEATANKPPAARKP
RTCGICHMPGHTRVTCPQR
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgctagtgcacctcctcaggagatctctgcttcgatctggattacagcggctaggggtc
caacggaggggtttctgtgcggcgcagagtgaccggtgtccgggcacaccgcagcaggca
gacatgatccggagccgtgctcagatcaagcgggtcctctgcgtggccgagaagaacgat
gctgccaaaggcatctcagagatcatgtccggcggcacgtccaggaggagagaggggatg
tcaaagtttaataaaatctatgagtatgaatatcatctctttggtcagaatgtgacagta
acaatgacttcagtatcggggcatttactgggtctggagtttaaagcacagttccagaaa
tggcacagttgcaatcctgtgctgttatttgatgctgaggtagagaagcactgtccagat
aacatgaaacaaatcaagcggacactggagaaagaggcgaggcagtgccaggccttagtc
atctggactgattgtgacagagagggagaaaacattggctttgaagtcatagatgtctgc
aaagcagtgaagcccaatttacaagtatttcgggcaaagttttctgagatcacccctaac
tccattcggagagcttgtgagaccctcattgagccagatgctaacgtcagcgatgctgtc
gatgtccgtcaggagctggacttgcggataggtgcgtccttcactcgattccagacgctt
cgcctgcagaagatctttccagagtctctggccaatcagctgatctcatacggcagctgt
cagtttcccactctgggctttgtggtggagcgtttcaaagccatccaggctttcatacct
gagactttctacaagatcaaagtgctgcacgaggtggacgaggacaccgtagagttcaac
tggaaaagaaaccgtctcttcaaccacacagcttgcctggtgctctaccagatctgcatg
gaggatcccatagcaacagtcacctcagtaaccagcaaacccaagagcaagtggagaccg
ctgcctttggacactgtggaactggagaaacttgcatctcggaaactaagaataagcgcc
aaagagaccatgaaaattgcagagaaactctatacccaggggtatatcagctacccccgt
acagagacaaacattttccccacaaccttggctctcgggcccctggtggagcagcagaca
cagagcccggtctgggggatgttcgcccagcaggtgattgagcagcctgggggtcccaac
ccacgacagggcaagaaatctgaccaagcccacccccccatacaccccaccaagtactcc
ggtggactgcagggcaatgaaggacgtgtgtatgagttcattgtccgccacttcctggcc
tgtgtatcccaggatgctttggggcaggagactgtggtggacattgacatcgcccaggag
aacttctccacctcgggacttatgatcattgcaaagaactacttggacgtttacccgtat
gacaggtggagcgctaaggtgattcccgtgtatgaacaaggctctcagttccggccctct
gcagtcgagatggtggacggacagacgagtcctccgcagctgctcactgaagccgacctc
atatccctgatggagaagcacggcatcggcaccgatgcaacccatgcagaccacatcgag
accatcaagagtcgcatgtatgtgggcttaacagccgatcagaggtttctgcctggagag
ctcggcatgggactggtggagggttacaactccatgggatatgagatgtccaaaccaaac
ctgcgtgctgaattggaggctgacctgaagctggtatcagagggcaggaaggacaaacag
aacgtgctgcagaaccacatccagaaatacaagaccgtcttcatcgagtccgtcaggaag
gcgaaaaagttagatgaagccctgtcgccttatctgggagcagctcaggagatcgccgaa
gtagagcagcaggacatggagatgccgcttccggtcaggaagtgccctcactgcaggcgg
gacatggtgctgaagaagaagagggagggaaacagtaggtacctgtcctgcacgggctac
ccagcctgcaagactgcagtgtggttccccgacacggtgctggaggtgagcagagacgac
agcatctgtcccacctgtcagccgcaccctgttcacatgttaaagttcaagtttcgcagg
ggcagcctccctcccatgatgcctttagagttcgttggctgcatcggtggatgtgacgag
acgctcagagaggtgctggacctgaagtaccttcgggcaggaggaggtggtgtgggtgga
gggggtgggggagggggtggtggaggagggggaggaagaggagatgatcctcgtccacca
gctccaaggccccccagaccagagcaccctggacccccaaggtcaaatcctcgaccgtcc
cttcccccggtcccctcctggaccccgcagccacgacctccagcgggtggcggtggtggc
ggtgtgtacagcagcagcgatgctgtcgtgtgtaactgtggtcaggacgcggtcctcctc
accgtgcgcaaagacggccccaaccaaggtcggcagttctacaagtgcaacgccgggagc
tgcaacttctttctgtgggcggatcagccgagtcagcagggagagccgcagggtcgaggt
cctccgctgcaagccccaccgaggctctccgtggggttcaggaacacccctggaggagga
ggaggaggaggagggcaggcggggggtgcaggaggacatgcgggacagatgatgtgtaac
tgtaacgaggcagcggtgatgcgcacggtgcagaaggacggtccaaacaagggccggatg
ttccacacttgcgggaaaccaagagaccagcagtgtggcttcttcctgtgggccgatgag
aacgaacctccaccaggtgtgtttggtggtgggtttaatggtgatggagacgcagggaag
aaggggaggaggaccatgggagaggccaccgccaacaaacctccagctgctaggaaacct
cgcacctgcggcatctgccacatgccgggacacacccgagtcacctgcccccagcggtga
DBGET
integrated database retrieval system
