Cebidichthys violaceus (monkeyface prickleback): 137879801
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Entry
137879801 CDS
T10484
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137879801 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cve03021
]
137879801 (smarca2)
03036 Chromosome and associated proteins [BR:
cve03036
]
137879801 (smarca2)
Transcription machinery [BR:
cve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137879801 (smarca2)
Chromosome and associated proteins [BR:
cve03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
137879801 (smarca2)
Chromatin remodeling factors
BAF complex
137879801 (smarca2)
PBAF complex
137879801 (smarca2)
GBAF(ncBAF) complex
137879801 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
137879801
NCBI-ProteinID:
XP_068576799
LinkDB
All DBs
Position
Unknown
AA seq
1590 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QGQSEYSQDGMYPMHKTMEGMNEKTMADAMHFGHMKGVGMRSLHSGMGPPQSPMDQHSQG
YISPHPSPMGVHEHASSPMSGGGVPTPPHMPPSQSGPMMPMDPQSAGPNMSNMSQQGRGP
SAFSPVQLQQLRAQILAYKILGRGQPLPDNLQLAVQGKRSLPTMQQQQQQQQQQQQQQQQ
QQQQAPSGSPYNRPPGMPMAPLGGPQSSPCPTPTMQGHNQSAGPKPWSDGPVGENQAIAQ
KHLTPVPSGRPSPAPPQASALPAGPPMPGGSVTPQLPGQQVSPMLQLQKQNRVTPIQKPQ
GLDPVGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQD
VVACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSI
LQHAKDFKEYHRSMSGKMQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYR
KLIDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKDKKKKKKKKKKFDGDGEGTSA
IGPDGEPIDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSE
ESGSEFEDEEEEEGSKAEPEDQKIIDPNGVEVFVEAAKHIIESAKQDVDDEYIVPTGQTS
SQSYYGVAHAVIERVEKQSSLLINGSLKHYQVQGLEWMVSLYNNNLNGILADEMGLGKTI
QTIALITYLMEHKRINGPFLIIVPLSTLSNWLYELDKWSPSVVKIAYKGTPVLRRGLVPQ
LRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRL
LLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRR
LHKVLRPFLLRRLKKEVESQLPEKVEYVVKCDMSAIQKVLYRHMQRGILLTDGSEKDKKG
KGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGVISGLDLYRASGKFELLDRI
LPKLQATNHRVLLFCQMTTLMTIMEDYFGYRNFQYLRLDGSTKSDDRAMLLKKFNEEGSQ
YFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVN
SVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGHERHAFLQAILETEEQNEEEDEIPDDET
LNQMIARNEDEFELFMRMDMDRRREDARNPKRKPRLMEEDELPSWIIKDEAEVERLTYEE
ESEKMFGRGSRCRRDVDYSDALTEKQWLRAVEDGNLEEMEEEIRLKKRKRKRRQDKDSSS
REDGGSSKAKKKRGRPPAEKHSPNPPKLTKQMNSIIDTVINYRDGSARQLSEVFVQLPSR
KELPEYYELIRKPVDFKKIKDRVRNHKYRGVGDLERDVMLLCHNAQTFNLEGSQIYEDSI
VLQSVFKSARQKIAKDEESEDDSEEDDDDEDESEAEAKAVRVKIKLSKEARSHDKGKKRQ
SRGKAKPVVSDDDSDEDLDDNDQSDKSDDD
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcagacacatccggtggtatgtcacatcctggcccttctccgggggca
ggtctatccccggggcccatcttgggccctagccctggaccggacccctcaccgggctcc
gttcacagtatgatgggacccagtcctggacctggaacacccaacgcacctcatggcatg
cagggacagagtgaatactctcaggatggcatgtatcctatgcacaagacgatggagggg
atgaacgagaagaccatggcggatgcgatgcactttggccacatgaaaggtgtggggatg
aggtctctgcatagtggtatggggcctccacagagtccgatggaccagcacagccaagga
tacatatccccccatccatcccccatgggtgtccatgagcatgcttccagtcccatgtca
ggaggtggggtgcccacaccaccccacatgcctccctcccagtcgggccccatgatgccc
atggatccccagtcagccgggcccaacatgtccaacatgagccagcaggggcggggacct
tctgccttcagtccggtccagctgcagcagctcagagctcagatcctggcctacaagatc
cttggccgtgggcaaccgctgcctgataacctccaactggctgttcagggcaagaggagt
ctacccacaatgcaacagcagcagcagcagcagcaacagcagcagcagcagcagcagcag
cagcagcagcaggcacctagtggtagcccttacaacaggcctccaggtatgccaatggca
cctttgggcggtccccagtcaagtccctgccccaccccaaccatgcaaggacacaatcag
agcgcaggacccaagccttggtctgatggtccggttggtgaaaaccaagccatcgctcag
aagcacctcaccccggtacccagcggacgcccctcccccgctcctccccaggcctcggct
ctgccggccgggcccccgatgccgggcggctcggtgaccccccagcttcccgggcagcag
gtgtcccccatgctccagctgcagaaacagaaccgcgtcacgccaatccagaagccccag
ggcctggacccggtggggatcctgcaggagagagagtacaggctgcaggctcggattgcg
catcgaatccaggagctggagagtctgccgggctcgctgccccccgacctgaggactaaa
gccacggtggagctcaaggcgctgcgtctgctcaacttccagcggcagctgagacaggac
gtggtggcgtgcatgaggcgagacacgaccctggagacggcgctcaactcgaaggcgtac
agacgcagcaagaggcagacgctgagggaggcccgcatgaccgagaagctggagaagcag
cagaagctggagcaggagaagaagcgcagacagaaacaccaggaatatctcaacagcatc
ctccagcacgctaaagacttcaaggagtatcaccgctcgatgtccggtaaaatgcagaag
ctcacccgagctatcgccacctggcacaccaacacggagcgggaacagaagaaggagacg
gagagaatcgagaaggagaggatgaggagactcatggcagaagatgaggaaggctaccga
aaactgatcgaccagaagaaagacaagcgcctggcctacttgctgcagcagacggatgaa
tacgtggccaacctcaccaccctggtgtacgaacacaaagctgcgcaggctgccaaggat
aagaagaagaagaagaagaaaaagaagaagtttgatggagatggtgaaggcaccagcgcc
attggacctgatggagagcccatcgatgagagcagccaaatgagtgagctgcccgtcaaa
gtgattcagacggagacggggaaagtcttgcaggggacggacgctcccaaatccagccag
ctggaggcctggctggagatgaaccccgggtatgaagtcgccccgcggtcggacagcgag
gagagcggctccgagttcgaggatgaggaggaagaggaggggtccaaggcagaaccggag
gaccagaagataatcgatcccaacggagtggaagtgtttgtggaagctgccaagcacatt
atcgagtcggccaagcaggatgtggatgacgagtacatcgttcccactggacagaccagc
tcccagtcgtactacggcgtggcccacgctgtcatcgagagagtggagaagcagtcgtct
ctgctgatcaacggctcactcaaacattaccaggtccaggggctggagtggatggtgtcc
ctgtacaacaacaacctaaacggcatcctggctgatgaaatgggcctcggcaaaaccatc
caaaccatcgccctcatcacctacctgatggagcacaagaggatcaacgggcccttcctc
atcattgtccctctctcgactttatctaactggctctatgaacttgacaagtggtcgccc
tctgtggtcaaaattgcttacaagggcacccccgtgttgcgtcgtgggctcgtgcctcaa
ctccgcagcgggaagttcaacgtcttgctgaccacctacgagtacatcatcaaggacaag
cacatcctggccaagatccgttggaagtacatgatcgtggacgagggccaccgcatgaag
aaccaccactgtaagctgacccaggtgctgaacacccactacgtggctccgcgccgcctc
ctcctcaccggcacgccgctgcagaacaagctgcccgagctgtgggcgctgctcaacttc
ctgctgcccaccatcttcaagagctgcagcaccttcgagcagtggttcaacgccccgttc
gccatgacgggagagagggtggacctaaatgaggaggagaccatcctgattatccggcgt
ttgcataaggtgctccgccccttcctgctgcgcagactgaagaaggaggtggagtctcag
ctgccagagaaggtggagtacgtggtaaaatgcgacatgtctgccatacagaaggttttg
taccggcacatgcagagaggcatcctcctcaccgacggctcggagaaagacaagaagggc
aaaggaggagcgaagaccctgatgaacaccatcatgcagctgaagaagatctgcaaccat
ccgtacatgttccagcacattgaggaatcttttgctgagcacttgggctttccaaacggc
gtcatcagtggactggatctgtatcgagcctcggggaagtttgagctcctggatcgcatc
ctgccgaagctgcaggccaccaaccacagagtcctgctgttctgccagatgaccactctc
atgacaatcatggaggactacttcggctaccgcaactttcaatacctgcgtctcgacgga
agcaccaagtctgacgaccgagcaatgctgctgaagaagtttaatgaggagggatctcag
tacttcatcttcctgctcagcaccagagccggcggcctcggcctcaacctgcaggctgca
gacacggtggtcatctttgacagtgactggaacccacaccaggacctccaggctcaggac
cgggctcaccgcatcggtcagcagaacgaggtgcgtgtgctccgtctctgcaccgtcaac
agcgtggaggagaagatcttggcagccgccaaatacaaactcaacgtggatcagaaggtc
atccaggcgggcatgttcgaccagaagtcctcgggccacgagcgccacgccttcctgcag
gccattttggagactgaggagcagaacgaggaagaagatgagatacccgatgacgaaacc
ctcaaccagatgatagcccgtaatgaagatgaatttgagctcttcatgcgcatggacatg
gaccgacgccgcgaggacgccaggaacccgaagcgtaagcctcgtctcatggaggaggac
gagttgccttcttggatcatcaaagacgaagctgaggtcgagcggctcacgtacgaagag
gagtcggagaagatgttcggccgaggatcgcgctgtcgcagggacgtcgactacagtgac
gcgctgactgaaaaacagtggctgcgggccgttgaggatggaaacctggaagagatggag
gaggagatccggctgaaaaagcgcaaacgcaagagacgccaggacaaggactcttcgagc
agagaggacgggggctcctccaaggccaagaagaaacgtgggcgtccgccggctgagaaa
cactcccccaacccccccaaactcaccaagcaaatgaacagcatcatcgatacggtcatc
aactacagagacgggtcagcaagacagctaagcgaggtcttcgtccagttaccgtccagg
aaggagctcccagaatattacgagctgatcagaaaacctgtggacttcaaaaagatcaag
gatcgtgtgaggaaccataaatacagaggagtcggagacctggagagagatgtgatgctg
ctctgtcacaacgctcagaccttcaacctggagggatcacagatatacgaggactccatc
gtccttcagtctgtgttcaaaagtgccaggcagaagattgccaaggatgaagagagtgaa
gacgacagcgaggaggacgacgatgacgaggatgaatcggaggctgaggccaaggccgtg
cgggtgaagatcaagctgagtaaagaggcgcgcagccacgacaaaggcaagaagaggcaa
agccgagggaaggccaagccggtggtcagcgacgacgacagcgacgaagacctggatgac
aacgatcagtcggacaagagcgacgatgactga
DBGET
integrated database retrieval system
