Cebidichthys violaceus (monkeyface prickleback): 137879884
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Entry
137879884 CDS
T10484
Symbol
whrnb
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cve03037
]
137879884 (whrnb)
Cilium and associated proteins [BR:
cve03037
]
Primary cilia and associated proteins
USH complex and associated proteins
137879884 (whrnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
DUF6288
USH1C_N
HisG_halo
Motif
Other DBs
NCBI-GeneID:
137879884
NCBI-ProteinID:
XP_068576931
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MSADPERVSLNTSVNSEGSGGPALSANVRRLHNALNLLLNDPEREQFIHCLNVYHAKRNV
FDLVQTLKVILDTASKRQLLPMLRLVIPRSDQLLFDQYTSEGLYLKTELLPSNGNAEGFG
DEGDLTLQKYVSSIHEQHLTSGCPDGFSATAETSPSMAPSFLEGPFREVRKVTLTRSRSH
EGLGFSIRGGSEHGVGIYVSLVEPGSSAEREGLWVGDQIVTVNDIMFDNVTHVEAVKVLK
GCKKLAISVCSVGRIPGGYITNQVYSWVDPEGRSVSPPPDDLQEADQRLGHGMEERTANL
DMDGGRSLGLMIRGGAEYGLGIYITGVDPGSAADAGALQVGDQIMEINGHSFLTISHDEA
VQILKTGRRLLMKVRGVGRLPHARTVVDETKWICSQAIAETNATATNPTVTAGVQGSVSA
GICSSRPSSAKVTPVLGKPAVFRGVGPPGAQVSLEQQAYMLLTEPERQTMAYYLQEYQEG
HIEVEPLAMALFELFNTHAKLSMLSEVRSLVPPQDLELYDRLVLHREREANQTWHRGLGA
LHPQGHCNHSTSVIHDTDHTAPATTEWTETHQENTNAFQNMELDERQAADGSPPFFRTVL
LQAQTKPSKEKEKKPSARRMQPRSSLLFTGPAWLLQECLHKSLKALPTTQQPSPVSAYHS
CSGASHHASLNALHHTCQSSLQLSKSEHPNPPHFAHHFHHHAAHHSQPSSGHHTCPGFLH
HRDSSSSAKPEASVRLASRSSSYEKSSYLSKSASSSKAASPMQSPHPSPHLSPFPSPCPS
PCPSLITPAPPCGLDRPCSPAFTHNVIITNMNRLSADSRQQQRGSTLSQLSDSGQTLSED
SGVDIAEAGGLSKDGSPRPSKNQQGNLDQPGTRVLPPGTRQQTGSPVPVPTATLVRVTKN
ANTLGIAIEGGANTRQPLPRVVTIQKGGSAHNCGQLKVGQVILEVNGVSLRGLEHKDAAQ
IIAEAFKTKDEDQIQFLVVEPGL
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgatccggagcgcgtttcgctcaacacatcggtgaactcggagggctcgggc
ggccctgcgctttcggcaaacgtccgcaggctccacaacgcgctcaacctgctgctcaac
gacccggagagagagcagttcatccactgcctcaatgtgtaccacgccaagcgcaacgtc
ttcgacctggtccaaactctcaaagtgattctcgacacggccagcaaacgacagctgctg
cccatgctgcgcctggtcatcccgaggtccgaccagctgctgttcgaccagtacacgtct
gagggactctacctgaagacagagctgctccccagcaacggcaacgcggagggctttgga
gacgagggcgacttaactctgcagaaatatgtcagttccatccacgagcagcacctcaca
tccggctgtccggacggcttcagcgccaccgcagagacgtctccttccatggccccgtcg
ttcctcgagggtcccttcagagaagtgcgcaaagtcaccctgacgcgctccaggagccac
gagggtctgggctttagcatccgtggggggtcggagcacggagtggggatctacgtgtcc
cttgtggagccgggctcgtcggccgagagagaaggactgtgggtcggggaccagatagtg
accgtaaacgacataatgtttgacaatgtcactcacgtagaggccgtgaaggtgctgaag
ggatgcaagaagctggctatttcagtgtgttctgtgggtcggatccctggaggctacatc
accaaccaggtgtacagctgggtggaccccgagggccggagcgtttccccgccacctgac
gaccttcaggaggccgaccagaggctgggacacggcatggaggagaggacggcaaatcta
gatatggacggtggtcgctctctgggcctaatgatcagaggtggtgctgagtatggactg
gggatctacatcactggagtggaccctggatctgctgcagatgctggtgcactacaggtg
ggagaccagatcatggaaatcaacggtcacagctttctcaccatctcccacgatgaggca
gttcaaatcctcaaaacaggacgccgcctgctgatgaaggtgaggggcgtcggtcgtctg
cctcatgcacgcacggtggtcgatgagaccaagtggatctgcagtcaggccatcgctgaa
accaacgctacagccaccaaccccacggtcactgctggcgtccaaggcagtgtcagtgcc
ggtatctgcagttcacgaccatcctcagccaaagttacaccagtattaggaaagccagca
gtgttcagaggtgtgggcccgccgggtgctcaggtgtctctggagcagcaggcctacatg
ctgctgacggagccagagaggcagaccatggcctactacctgcaggagtaccaggaggga
cacatagaagtggagccactggccatggctctgtttgagctctttaacacacatgcaaag
ttgtccatgttgtctgaggtgaggagtctggttcctccccaggacctggagctgtacgac
aggctggtgctgcaccgtgagagggaggccaaccagacctggcaccggggcctgggagcg
ctgcatccacagggccactgcaaccactcgacttctgtgatccacgacacggaccacacc
gcccctgctacgactgaatggacagaaacacaccaggagaacacgaatgccttccagaac
atggagctggatgaaaggcaggctgcagatggatctcctccgttcttcaggaccgttctt
ctccaggctcagaccaagccgtctaaggagaaggagaagaagccttcagctaggcggatg
cagccccgttccagcctgctcttcactggccccgcctggctgctccaggagtgcctccac
aagtcgctcaaagccctccccaccacccagcagccctcgccggtctctgcctatcactcg
tgctctggggcgagccaccacgcttcgctaaacgctctccatcacacctgccagagttcc
cttcaactctctaagtctgaacacccgaaccccccccacttcgctcatcacttccaccac
cacgctgcccaccacagccagcccagttcaggacaccacacctgtccaggcttcctacac
caccgggactcctccagctctgcaaagccagaggcatctgtcagactcgcttccagatcc
agctcctatgagaagtcctcctacttgtcaaagtctgcgtcctcttccaaggcagcctct
cccatgcaatcccctcatccatcaccccatctctcgccattcccctctccctgcccctcc
ccctgcccctccctcatcacacctgctccgccctgtggtctagaccgtccctgctcacct
gccttcacccacaatgtgatcataacgaacatgaaccggctgtctgcagactccagacag
cagcaaagagggtccaccctgtcccagctgtcagacagcggacagactctgagtgaggac
agcggggtggacatagccgaggcaggaggcctcagtaaggacggcagccctcgacccagc
aagaaccagcaaggcaatctggaccagccggggacccgtgtactacccccagggaccaga
caacagaccggctcaccggtcccggttcccacagctactttggtacgagtgacgaaaaat
gccaacacccttggcattgctatagagggaggagccaacacacggcaaccgttgccacgc
gttgtcaccattcagaaaggaggctccgcccataactgtggtcagctgaaggtgggtcag
gtcatcctggaggtcaacggcgtgtctctgagaggtctggagcacaaggacgctgctcag
atcatcgctgaggccttcaagaccaaagacgaggaccagatccagttcctggttgtggag
ccgggactctag
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integrated database retrieval system
