Cebidichthys violaceus (monkeyface prickleback): 137880244
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Entry
137880244 CDS
T10484
Symbol
ptbp1a
Name
(RefSeq) polypyrimidine tract-binding protein 1a
KO
K13218
polypyrimidine tract-binding protein 1
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cve03019
]
137880244 (ptbp1a)
03041 Spliceosome [BR:
cve03041
]
137880244 (ptbp1a)
Messenger RNA biogenesis [BR:
cve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
137880244 (ptbp1a)
Spliceosome [BR:
cve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
137880244 (ptbp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
137880244
NCBI-ProteinID:
XP_068577584
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MDGRLDAELYPLGTGYVPEIESVHDISVGTKRGSDELFSSCISNGPYIMSSANGNDSKKF
KGDVRSPGVPSRVVHVRKLPNDINEAEVIGLGLPFGKVTNLLMLKGKNQAFLEMTSEECA
QTMVSYYSSVTPVIRNHPIYMQYSTHKELKTDNSPNQVRAQAALQAVNALHGGGMGSMAI
PADVASMGGGPGSQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALI
QYADGLTAQHAKLSLDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQ
ASLDHQTMAAAAFAAPGLISASPYGAAHGFPPAFAIQQSGLSMPGMPGALASLGVSHGGM
AAAAAAASRLGLSGFGASAGHHVLLVSNLNPESVTPHCLFILFGVYGDVMRVKILFNKKE
NALIQMSDSTQAQLAMSHLNGQRLHGRAMRVTSSKHTTVQLPREGHEDQGLTKDYGNSPL
HRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDLRRLFASSGATVKAFKFFQKDRKMAL
IQMGSVEEAIESLIEFHNHDLGENHHLRVSFSKSTI
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgcctagacgctgaactgtaccctctgggaaccggctacgtccctgaaatt
gaaagtgtccatgacatatcagttggcacaaagaggggatccgacgaactcttttcttcc
tgcatatccaacgggccctatatcatgagctcagccaatggcaacgacagcaaaaaattc
aaaggtgacgtccgcagtcctggtgttccgtcacgcgtggtccacgtacgcaagctgccc
aacgacatcaatgaggctgaagttattggcctgggactgccctttgggaaggtcactaat
ttgctgatgctgaaagggaaaaaccaggcattcttagaaatgaccagcgaggagtgtgca
cagacgatggtgagctactactcctctgtaacccccgtcatcagaaaccaccccatctac
atgcaatactcgactcataaggagctgaagaccgacaactcccccaaccaagtgcgtgcc
caggccgctctgcaggcagtcaatgctctgcatggaggtgggatgggaagcatggccatt
ccagcagatgtggctagcatgggaggaggaccagggtcccagagccctgtactccgagtc
attgtggaaaacctcttctaccccgtcaccctggatgtacttcaccagatattctctaag
ttcggcactgtgctgaagatcatcacattcaccaagaacaaccaattccaggctctgatc
cagtatgccgatggcttgacggctcagcacgccaaactgtctctggatggacagaacatc
tacaacgcctgctgtaccctgagaatcagcttctccaagctcaccagcctcaatgtcaag
tacaacaacgacaagagccgggattacacccgtccagacctccccactgcagactcacag
gcctccctggaccatcagaccatggcagctgctgcatttgctgctccgggcctgatctca
gcctctccttatggtgcagctcatggcttccccccagccttcgccatccagcagtcaggg
ttgtcaatgcctggtatgcccggtgccctggcgtccctgggcgtgagccacggcggcatg
gccgctgccgcggcagccgctagccggctcggcctgtccgggttcggtgcctctgcggga
caccatgtgttgttggtcagcaatctgaaccctgagagcgttacgccacactgcctcttt
attcttttcggtgtgtacggcgacgtgatgagagtgaagatcctgtttaataaaaaggag
aacgctctgatccagatgtctgatagcactcaggctcagctagctatgagccacctgaac
ggtcagcgtcttcatggccgggccatgcgcgtgacgtcttcaaaacacaccacagtgcag
ctgcccagagaaggccacgaggaccagggtctcacaaaggactacggcaactcaccgctg
caccgcttcaagaagcctggctccaaaaattactccaacatcttcccaccctcggcaaca
ctccacctctccaacataccgccttctgtggtggaggacgacctccggaggctttttgcc
agctcaggagccacagtgaaggccttcaagttctttcagaaagaccgcaagatggccctg
atccagatgggctcagtcgaggaggcaattgagtccctcattgagttccacaaccatgat
ctgggagagaaccaccaccttcgagtgtccttctcaaagtccaccatctga
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