Cebidichthys violaceus (monkeyface prickleback): 137881030
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Entry
137881030 CDS
T10484
Symbol
spg11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cve03400
]
137881030 (spg11)
DNA repair and recombination proteins [BR:
cve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
137881030 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
MH1
Motif
Other DBs
NCBI-GeneID:
137881030
NCBI-ProteinID:
XP_068578814
LinkDB
All DBs
Position
Unknown
AA seq
2410 aa
AA seq
DB search
MSEERSSLEVCVIPENQHCGGVPDLRRAELAPGGSLLGCLGVRGTLVVWDPADRETPPAS
VDGCYADFLWDEEAVLGSPGVFRLVSVGAQWDLKLLEVEAERSASIAVLCVSECPAGRLL
QTVREQDDGVCELQSVRLLSFAAGRGCVLLNRDWLLRLQWQRTEAEPQTLSCRNIRLADG
DRHSAVHHCVCRDTLFILSSTGLISVCDITDGGLLASINLPAYLTPLQPEDDLVSSSCSS
SSSSSFCLLQVSSDLSTAVAVTQTHGAVAIDLDHYFSLYPDHLLCAAPPRPPPHHRDQDG
LSSSDSSLAALGATFRADRSWEARLASMYSRASSSSSSCSSSCSSSSSSSWSSSLPHLEP
HRASSSSSSRSRVPRGGSAASFSVPESSAPSLLTVTEFSAQLTFVRPGNGGTTAALWDFE
SGGVSLHRAEGEAAPVQRCGERQHRLLLRKSGVFQVLFSVSQQDLLSRLMLFGSAATVDA
VCHLNSWGRCSIPVHALQAGLKNRQLDTVDFYLKSKEHLLIPAAEQPETSTQSLTERFQE
LCPALDLLCSAVRDSNSEAQSRQFSEQLLNITMSFVNTQIRSVLSNTQLEDAGVRGCVDA
LDRYVTELRSYMKRFPWPAGGDASNTDSVDRAQEEAQRDEWEQLSTEEVVRQSVLTNQIP
RAQAVLRRRSRPERRLSALRMEGLRQVFCCLQDRDLQTANTLLTNMGFSVKKQLHSICLY
TDDKNLREFVVEELCGRGCFPEEEVQSVAFIREMERLGSLPAARCSADPSPHRLVQVQMV
HREAAGGGEEVLEELVGHRRSEEEKAGLWRNLRLDWVRNWDQSCQTAVLLSRLHHTEVTS
CDSAVLWRYLTALHDQRRVVDWIRNQEAPGGSRWPELTPELVNDNTACSSYMREEILDLL
ARRGVLVPEELEDLEQLLWRLAQGGGVMASPPPVPQYRSVLGLDLHGLFISFCVERGLQY
LLYSYLEHHRLTPRNCPLLTNQSLSESQPWFEMLVKIQEITRDLSDPGLVFQASLTSAQV
LLPGSQASLSSLLLEGHSLLALAAVMFAPGGIDQVVDQGERSGRSERTVDPQLLKMALAP
HPKLRAALFPSGPRGTSPSSDISVYHLLQSLHPLDPSRLFGWQSANTLNSTETSELPHFS
SPHLVGRFALVEKLDFLYYLRHGRPSFAYATFLVQRLSGCGDVTLLLQQACQQAYRSALQ
SFNVPSVTSAAVCFCELLGICSLKLRVDIRAMNTVLQHWSQSYTLQLHTLASIGVKLAEA
EPGAAEELIGYLEAAVTDSLEQKGISRSSYEAAQEWALPVQFCQLHSLKLSSVYPAHCAD
DGQFIHFLLFVQLHSFPPQQVRSLAAQFGPALQAHLSLAFQDLQVCSQRRWPRGSEEQPV
SLDAEEAPGSPEHPRELFQVLLQSQEEAGPCRYLLQEALVQRCPTLAVMAACQQGAELLP
CLCVWLLTSVDDVAAGEAAAHLADAPQHHEWTLHDLSIIWRTLLGRGHVRPLLRGFELFQ
RDCPLVLVLRMFELCCDYRNFSEAKAKLLDFQRTLITLRNGGPAPPGGLPLQWVESQASV
LLLTMLQRCSSQYDLHRLLQLLADVDKLLKSNGPDFRKLSQLSQLLQGSEVSLSPRLLQC
SSPSVQQEEFQAAVDALQARGRYSQARQVALLAGLPVHRLLLSQLLQEVNSQKSKRQWRR
LETRVGLWRRCHEQLKAESADPESASRFFLSQADAVTADPPEAQTELLDVQERCLLLCLA
ARWLSLLGPAPGDRLESLEKKLWIGRVRRHVLAAAMEKESVFNLPPPAVTPDTNTYEVLM
REFSFSSISGLNTERWLGLEGLPGPGEDREEPDAESPLSPEERSALAALVGQLLEEGSIH
EASRVCRYFSLYHRDMWVVLRCRGLASGDLNPEPQEEASEVLPKKSLTSSPSMSSLSSFV
MLPLPEDEVAVQLQKLVDQCRHGNNYCKQVLSLYQLSKELQCSFSQMCREEPHSVLEKLL
LSEQPERFRKAQLFIKAQGLSADSVAQLVSSAVVQALLASSSSSSSSSSSSAQELQPGER
QVFRPSEGRHSLVQLFKLCDDPNLVGVKLLENLNTVPLRDLSCIVELLVVAHDCFSLTCN
MEGIVRVLQAARHLSHTYLAPGEHYSLLVRLLTGIGRYNEMTYVFDLLHQNHRFEMLLRK
KMDTDRGQSSSLKTALLDYIKRCLPADSEKHNMVALCFSMRREIGENHEMAARTQLKIIE
SQAWVVTPDLKSSLVKALGLLRDAAESFSKDSCVRQASRCVRTAKLVALQLHFLNRESDL
RLVNLRPAELLNAVTALPRCYQVFVVSEAYGYSPDWAQILYQKVVLNGDFVYLEELKRHR
PLTSGLFEDIFQKLDGTPGSVTANVKRLLSHCDDTYSRYRLAYQHDLYDVTKTLLRDADT
SSYLNDRLAG
NT seq
7233 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggagcggagctccttggaggtgtgtgtgatcccggagaaccagcactgtggc
ggggtaccggacctgcggagagccgagctggctcctggaggctccctgcttggatgtctg
ggggtccgcggtacgctggtggtctgggacccggcggacagagagactcctccggcctca
gtggacgggtgttacgcagacttcctctgggacgaggaggcggtcctgggctctcctggt
gtcttcagactggtgtccgttggagctcagtgggacctgaagctgctggaggtggaagcg
gagcggtcggcctccatcgcggtcctctgtgtctctgaatgtcccgcaggccgcctgctg
cagaccgtcagggagcaggacgacggagtgtgtgagctgcagtcggtgcgtctgttgtcg
tttgccgccggccgcggctgcgtgctgctgaaccgtgattggctgctgcggctgcagtgg
cagcggacggaggcggagccgcagacgttgtcctgccgcaacatccggctggctgacgga
gacagacactctgctgtccaccactgtgtctgcagagacactctgttcatcctcagctcc
accggtctcatatctgtgtgtgacatcactgatggaggtctgctggccagcatcaacctc
ccggcttacctcactcctctccagccggaggacgacctcgtgtcctcctcctgctcctcc
tcctcctcctcctccttctgcctcctccaggtgtcctctgacctcagcacagctgtagcc
gtcactcagactcacggcgccgtcgccatcgacctcgaccactacttcagtttgtatcca
gaccacctgctgtgtgccgctcccccccgcccccccccccaccacagagaccaggacggc
ctgtcgagctccgacagcagcctcgccgccctcggagcgacgttcagggccgaccgctcc
tgggaagctcgtctggcctccatgtacagcagagcttcctcctcctcctcctcgtgctcc
tcctcgtgctcctcctcttcctcctcctcctggtcctcctccctcccccacctggagccc
cacagggcctcctcctcgtcctcgtctcgcagcagagtgcctcgcggcgggtctgccgcc
tctttctccgtccccgagtcgtccgctccgtctctgctcaccgtgaccgagttctccgcc
cagctgaccttcgtccgccccggcaacggggggaccaccgcggcattgtgggactttgag
tccggcggcgtgagcctccaccgggcggagggcgaggcggcgccggtccagcgctgcgga
gagagacagcaccgactgctgctccggaagtccggtgtgttccaggtcctgttctcggtg
tcccagcaggacttgctcagcaggttgatgttgttcggcagtgcagcgacggtagacgca
gtgtgtcacctgaacagctgggggcgctgctccatccccgtccatgccctgcaggctgga
ctgaagaaccgtcagctggacacggtggacttctacctgaagagtaaagaacacctcctg
atccctgctgccgagcagccagagacctccacccagagcctgacggagcgtttccaggag
ctgtgtcctgcgttggacctgctgtgttcggccgtcagagactcaaacagtgaagctcag
agccgacagttctcagagcagctgctcaacatcaccatgagcttcgtcaacactcagatc
cgctcggtgctgtccaacacacagctcgaggacgccggcgtccgcggctgcgtggacgct
ctggaccgctacgtcaccgagctgaggagctacatgaagaggttcccctggcctgcaggg
ggcgacgcctccaacaccgactctgtggaccgcgctcaggaggaggctcagagagacgag
tgggagcagctctccacggaggaagtggtccgtcagtccgtcctgaccaatcagatcccc
agagctcaggccgtcctgaggaggcggagccggccggagcggcgtctgtcggctctgagg
atggagggtctgcgtcaggtgttctgctgcctgcaggaccgagacctgcagaccgccaac
acgctgctcaccaacatgggtttcagtgtgaagaagcagctccacagcatctgtctctac
accgacgacaagaacctcagggagtttgtggtggaggagctgtgtgggcggggttgtttc
ccggaggaggaggtgcagagcgtggccttcatcagggagatggagaggttggggtctctg
cctgcagcccgatgctctgcagacccatcaccacacaggctggttcaggtccagatggtc
cacagggaggcggctggtggtggtgaggaggttctggaggagctggtgggacacaggagg
tctgaggaggagaaagcgggtctctggaggaacctcagactggactgggtgaggaactgg
gaccagagctgccagaccgccgtcctcctgtccagactgcatcacacagaggtgacctcc
tgtgactctgccgtgttgtggcgctacctgaccgccctgcacgaccagcgccgggtggtg
gactggatccgtaaccaggaggcccccggtggctcccggtggcctgagctgaccccagag
ctggtcaacgacaacacggcgtgcagctcctacatgagggaggagatcctggacctgctg
gccaggagaggagtgttggtcccggaggagctggaggacttggagcagctgctgtggagg
ctggctcagggcgggggggtgatggcctcacccccccccgtccctcagtaccgctccgtc
ctcggcctcgacctccacggcctcttcatctccttctgcgtggagcgtggcctgcagtac
ctgctgtacagctacctggagcaccacaggttgacgcccaggaactgtcccctcctgacc
aatcagagcctgtctgagagccagccctggtttgagatgctggtgaagatccaggagatc
accagagatctgtcagatccaggactggtgttccaggccagtctaaccagtgctcaggtg
ctgttaccgggcagccaggcgtctctcagcagtctgctgttagagggtcacagtctgctg
gctctggctgccgtcatgttcgcccccggagggatcgaccaggtggtggatcagggtgaa
cggtctggcaggtctgagaggacggtggacccccagctcctgaagatggcgctggccccc
cacccgaagctgagggccgccctgttcccctccgggccccgaggaaccagcccgtcctcg
gacatctccgtctaccacctcctgcagtcgctccaccctctggacccgtccaggctgttc
ggctggcagtcagcaaacaccctcaactccaccgaaacctcagagctgcctcatttctcc
agccctcacctggtgggccgcttcgctctggtggagaagctggacttcctgtactacctc
cgtcacggccgaccctccttcgcgtacgccaccttcctcgtccagcggttgagcggctgc
ggtgacgtcacgctgctgctgcagcaggcctgtcagcaggcctacaggtcggctctgcag
agcttcaatgttccgtctgtgacgtcggcggccgtctgcttctgtgagctgctgggaatc
tgtagcctgaagctgagggtcgacatcagagccatgaacaccgtcctgcagcactggagc
cagagctacacactgcagctacacactctggcgtctataggtgtaaagctggcggaggcg
gagcctggagcagcagaggagctgattggctacctggaagctgcagtgactgacagcctg
gagcagaagggcatcagcaggtcgtcctacgaggcggctcaggagtgggcgttgcctgtt
cagttctgtcagctccacagtctgaagctcagctctgtttatcccgcccactgcgccgat
gacggacagttcatccacttcctgttgtttgtccagctgcacagcttcccgccccagcag
gtgaggtcgctggcggctcagtttggccccgccctgcaggcccacctgagtctggcgttt
caggacctgcaggtgtgcagccagaggaggtggccccggggatctgaggagcagcccgtg
tccctggacgcagaggaggcccccgggagcccggagcaccccagggagctgttccaggtc
ctcctgcagagccaggaggaggcagggccctgcaggtacctgctgcaggaggcgctggtg
caacgctgcccaacgctggctgtaatggctgcctgtcaacagggggcggagctactgccg
tgcctctgtgtgtggttgttgacctccgtcgatgacgtcgcagctggagaagccgccgcc
cacctggccgacgccccccagcaccacgagtggacgctgcacgacctgtcaatcatctgg
aggacgctgctggggcggggccacgtcaggcccctcctacgaggctttgagctcttccaa
cgggactgtcctctggtgctggtgttgaggatgtttgagttgtgttgtgactacaggaac
ttctctgaggccaaagccaagctgttggacttccagaggacgctgatcactctgagaaac
ggaggcccggcgccccccggtggactccccctgcagtgggtggagagccaggcctccgtg
ctgctcctcacgatgctgcagcgctgctcctcccagtatgacctccaccggctgctgcag
ctgctggccgacgtcgacaagctcctcaaatccaacggtccagacttcaggaagctgagt
cagctcagccagctgctgcaggggtctgaggtcagcctgtctccccggctgctgcagtgc
agttctccctccgtccagcaggaggagttccaggccgcggtcgacgccctgcaggccagg
gggcgctacagccaggccaggcaggtcgccctgctggccgggctgcccgtccaccgcctg
ctgctcagccagcttctccaggaggtaaactcccagaagtccaagcgccagtggaggagg
ttggagacccgagtcggtctgtggaggaggtgtcacgagcagctgaaggctgaaagcgcc
gatccggagtcggcctcccggttcttcctgtctcaggccgacgcggtgaccgccgacccg
ccggaggctcagaccgagctgctggacgtccaggagcgctgcctgctgctctgcctcgcc
gcccgctggctctcgctgctcggcccggctcccggggaccggctggagagcctggagaag
aagctgtggatcggccgggtgcgacggcacgtcctcgccgccgccatggagaaagagagc
gtcttcaacctgccgccgcccgccgtcacgccggacacgaacacgtacgaagtgctgatg
agggagttctctttctccagcatatcgggcctgaacaccgagaggtggctcggtctggag
ggactccccggtcccggtgaggaccgggaggagccggacgcagagtccccgttgagtccg
gaggagaggagcgctctggctgctctcgtcggtcagttgttagaggaaggcagcatccac
gaagccagccgggtctgccggtatttctccctgtaccaccgggacatgtgggtggtgctg
cgctgcagaggtctggcctctggagacctgaaccctgaaccgcaggaggaggcctcagag
gttctgccaaagaagagcctgaccagctctccctccatgagcagcctgtcgtccttcgtg
atgctccccctccccgaagacgaggtcgccgtccagctccagaagctggtggatcagtgt
cgccacggcaacaactactgcaaacaagtcctcagcctgtaccagctctccaaggagctg
cagtgctccttcagccagatgtgccgggaggagcctcactcggtgctggagaagctgctg
ctgtcggagcagccggagcgcttcaggaaagctcagctcttcatcaaggctcaggggctc
tctgcagactctgtggcccagctggtgtcctcggccgtggtccaggcgctgctggcctcc
tcctcctcctcctcctcctcctcctcctcctccgcccaggagctgcagcccggtgagagg
caggtgttcaggccgtcggagggtcgtcactctctggtccagctcttcaaactgtgtgac
gatccgaacctggtgggagtcaaacttctggagaacctcaacactgttccactgagagac
ctgagctgcatcgtggagctgctggtcgtggctcacgactgcttcagtctcacctgtaac
atggagggcatcgtcagagtgctgcaagccgcccgacacctcagccacacctacctggcc
ccgggggagcactacagcctgctggtgcgtctgctgacaggtatcggcaggtacaacgag
atgacgtacgtcttcgacctgctgcatcagaaccatcgctttgagatgctgctgaggaag
aagatggacacggacagaggacagagctccagcctgaagacggcgctgctcgactacatc
aagcgctgcctccccgcagacagcgagaaacacaacatggtggctctgtgcttcagcatg
aggagggagatcggagagaaccacgagatggcagccaggacgcagctgaagatcatcgag
tctcaggcctgggtggtcactcctgatctgaagagctcgttggtcaaagcgttgggtctc
ctgagggacgctgcagagagcttctccaaggactcgtgtgtgcgtcaggcgagccgctgc
gtccggacggccaagctggtcgctctgcagctgcacttcctgaaccgggagtcggacctg
cggctcgtcaacctgagacctgcagagctgctgaacgccgtcacggcgctgccgcgctgc
taccaggtgttcgtggtgtcggaggcgtacggctacagtccggactgggcccagatcctg
taccagaaggtggtcctgaacggggactttgtttacctggaggagctcaaacgccaccgc
ccgctcacctccggcctgtttgaggacatcttccagaagctggacggcactcccggcagc
gtcaccgccaacgtgaagcgcctgctgtcgcactgcgatgacacgtacagccgctacagg
ctggcctaccagcacgacctgtacgacgtcaccaagacgctgctgcgggacgccgacacc
tccagctacctgaacgacaggctggccggctga
DBGET
integrated database retrieval system
