Cebidichthys violaceus (monkeyface prickleback): 137881231
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Entry
137881231 CDS
T10484
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04110
Cell cycle
cve04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
137881231 (smc1b)
04114 Oocyte meiosis
137881231 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cve03036
]
137881231 (smc1b)
Chromosome and associated proteins [BR:
cve03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
137881231 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
137881231 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
137881231
NCBI-ProteinID:
XP_068579159
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MGFLKQIDIENFKSWRGKNVIGPFMRFNCIIGTNGSGKSNVMDALSFAMAERVASLRVKH
LRDLIHGAHMGQPVLEAARVALRYCDDKDRETVFCRSISGDSSEYHINGIHVTLTKYIEE
LEKIGIVTKARNCVVFQGSVESIALKDPKERTKMFECISQSREFAAEYDVKKKALLKAKE
DTQFHFNKKKSATVERKQVSQEKIEAQRYQELLDNLHQSRLQLSLAELYWNEKGVDALSD
TLREKQLAAAAKNNTLVKEEQTFKTNKKDHGRLSREQQHIEKEIRVQEHVLSQSRSQYIK
AKVNSSHHMKKAEEVREALRKSQKLIAIKEQELAEERQEISELERTWRIYEKQQKKKKGA
SAERDVQLDDDQRERYKELKELTRKQGAVLSQQAEKLHWDVRADNEKMAFDQRRKKEVEV
AIRNGQTQLEDLLRRAETLEDYTKSCKSSLEKCRALEESLGAELQRGRQRSEELKQELGR
VLEELGNAHLDSQESRSQQRRKELLEKLRRLFPETVFGRLSDLCNPIHKKYQLAVIKVFG
HFMNAVVVSSEKVARDCISFIKEEGAERETFLPIDYLDVSPLNERLREISGAKMVVDVVQ
VSGSAGAAAQLRKVVQFVCGNALVCETIKDARSVAFDGPVRIKTVALDGTLFTKAGVISG
GSSYLRSRAQCWDEKDMMRLKTRKDKLTAEMRDLMKLKRKDSDLKQTAAQAQGTQTRLKY
SKAELENMQKKNIPKCQAEISRMESEVANLDSQIQMQQESVEAKEAEMKKIRDQIDQMED
MVFSDFCAEIGVDNIRDYEQESLKQQTELDKKRLEFESQCTRLNARLEYEQDRLEQQKKK
LHQMEETIDKEERTMAEQREDEEKLLTAVEDGQNKQLELNNQLLFKKSQVAAAKAELDQE
TQTLKEINKELVKLQREVMCAESALEQKRLARHNMLLACKIQGLPLTLLSGSLNEISEVQ
LDTESESTSTTMNIYEREARLVIDYSGLDAAELRSLQSLQTEEEVEAFLERLKESVSSVE
GVLHRTTTPNLKALSKMREVRDKLQEVKDAFEASAKATRKCGQEFERVKAQRMNRFSRCF
EHVCVVIDQIYKRICRNGSAQAILSAENPDEPYLGGINYNCVAPGKRFMSMDNLSGGEKA
IAALALVFAIHSFRPAPFFILDEVDAALDNTNIGKVTSFIREESRENMQIIVISLKEEFF
SRADALLGVHSDFEGCMFSRILTLDLRPYPLVDEDNGRQADPEKTGLV
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggggtttctaaaacaaattgatattgaaaacttcaagtcatggcgagggaaaaacgtt
atcggcccgttcatgcgattcaattgtataattggcacaaacggctctggcaagtccaac
gtgatggacgccctgagcttcgccatggcggagcgggtcgcctctctccgggtgaagcac
ctcagggacctgatccacggagcccacatgggccagccggtcctcgaggctgcccgcgtg
gccttgcggtactgtgacgacaaggaccgggagaccgtcttctgccggagcatctcaggt
gactcctctgagtatcacatcaatggtattcatgtcacactgaccaaatacatcgaggag
ttggagaagatcggcattgtgaccaaagcccgaaactgtgtggtgttccaggggtcagtg
gagtccatagctctgaaggacccaaaggagaggaccaagatgtttgagtgcatcagtcag
tcgagagagtttgctgcagagtatgacgtgaagaaaaaggccctgctgaaggctaaagag
gacacgcagtttcacttcaacaagaagaaatctgctaccgtcgagaggaaacaggtgtcc
caggagaaaatagaggcccagaggtaccaggagctgctggacaaccttcaccagagccgc
ctgcagctgagcctggctgagctctactggaacgagaagggcgtcgacgctctcagcgac
accctgagggagaaacagctggctgcagctgctaagaacaacacgctggtgaaggaagag
cagacgttcaaaaccaacaagaaggaccacggacgcctcagcagagagcagcagcacata
gagaaggagatcagagtccaggagcacgtcctgtcccagtctcgatcccagtacatcaaa
gccaaggttaacagctcccatcacatgaagaaggcggaggaggtccgtgaagccctgagg
aagagtcagaagctgatcgctattaaagagcaggagctcgcggaggaacggcaggagatc
tctgagctggagaggacctggaggatctacgagaagcagcagaagaagaagaagggagcc
tccgcggagagagacgtccagctggatgacgatcagcgcgagcgatacaaagagctgaag
gagctgacccgaaagcagggggctgtcctcagccagcaggcagagaaactgcactgggac
gtgagggcggacaacgagaagatggctttcgaccagcgccgcaagaaggaggtggaggtc
gccatcaggaacggccagactcagctggaagatttgctgcgcagagcagagacgctggag
gactacaccaaatcctgcaagtcgtcccttgaaaagtgccgtgcgctggaggagagcctc
ggcgccgagctgcagcgaggccgccagcgcagcgaggagctgaagcaggagctgggccgg
gtcctggaggagctggggaacgcccatctggacagccaggagagccgatcccagcagcgg
cgcaaagagctgctggagaagctccgcagactcttccctgaaacggtgttcggtcgtctg
tctgacttgtgcaacccgatccataagaagtaccagctggctgtcatcaaggtgtttggc
cacttcatgaacgccgtcgtcgtgtcctcggagaaagtggcccgtgactgcatctccttc
atcaaggaggagggagccgaacgcgagaccttcctgcccatcgactacttggacgtgagt
cctctgaatgagcggctgagggagatctccggtgccaagatggtggtcgatgttgtgcag
gttagcggtagcgcaggcgccgccgcccagcttaggaaagtggtgcagtttgtgtgcggc
aacgctctggtgtgtgagaccatcaaggacgccaggagtgtggccttcgacgggccggtg
cgcattaagacggtggctctggacgggacgctcttcacgaaggcgggcgtgatctctgga
ggctccagctacctgcggagcagagctcagtgctgggacgagaaggacatgatgcggctg
aagacgcgcaaggacaagctgacggcagagatgcgcgatttgatgaagctgaagcggaag
gactcggacctgaaacagacagctgctcaggctcagggcactcagacccgcctcaaatac
tccaaagcagaactggaaaacatgcagaagaaaaacatcccgaaatgccaagcggagatt
tctcgtatggagagcgaagtagcgaacctggactctcagattcagatgcagcaggagagc
gtggaggcaaaggaagccgagatgaagaagatcagagaccagatcgaccagatggaggac
atggtgttttctgacttctgcgctgagattggtgtggacaacatcagggattacgaacag
gagagcctgaaacagcagaccgagctcgacaagaagcggctggagtttgagagtcagtgc
acccgcttgaacgctcggctggagtacgaacaagaccgactggagcagcagaaaaaaaag
ctccaccaaatggaggaaaccatcgacaaggaggagagaaccatggccgagcagagggag
gacgaggagaagctgctgacggcggtggaggacggtcagaacaaacagctggagctgaac
aaccagctgctgtttaagaagagccaggtggccgctgccaaagctgagctggaccaggag
acccagaccctcaaagagatcaacaaagagctggtgaagcttcagcgggaggtgatgtgt
gcggagtcggccttggagcagaagcgcttggccagacacaacatgctgctggcctgcaag
atccagggtctgcccctcactctgctgtcggggagcctgaacgagatcagcgaggtgcag
ctggacacggaatctgaaagcacttcaaccaccatgaacatctatgagagagaggcgcgg
ctggtcatcgactactccggcctggacgcagcagaactcaggagtctgcagagtctgcag
acagaggaggaggtggaggccttcttggagaggctgaaggagtcggtctcctccgtagag
ggagtgctgcatcgcaccacgaccccaaacctgaaggctctgtccaagatgagggaggtc
agggacaagttacaggaagtgaaggacgcgtttgaggccagcgccaaagcgacccgaaaa
tgcggtcaggagttcgagcgagtcaaagcccaacgcatgaaccgcttcagccgctgcttc
gaacacgtgtgcgtcgtaatcgatcagatctacaaacgcatatgcaggaacggcagcgcc
caggccatcctgagtgcggagaatccggacgagccgtacctcggcgggatcaactacaac
tgcgtggcgccggggaaacgcttcatgtccatggacaacctgtctggtggagagaaggcc
atcgctgccctcgccctggtgttcgccatccacagcttccgcccggctcccttcttcatc
ttggacgaggtggacgcggcgctggacaacaccaacataggcaaggtgaccagtttcatc
agagaggagtccagagagaacatgcagatcattgtcatctccctgaaggaggagtttttc
tccagggccgacgctctgctgggagtccactcagattttgaagggtgcatgttcagccgc
attctgaccctggacctgcgtccctatcctctggttgacgaggacaacgggagacaggcg
gacccggagaagaccggactcgtgtag
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