KEGG   Cebidichthys violaceus (monkeyface prickleback): 137881261
Entry
137881261         CDS       T10484                                 
Symbol
skic8
Name
(RefSeq) superkiller complex protein 8
  KO
K12602  WD repeat-containing protein 61
Organism
cve  Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137881261 (skic8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cve03019]
    137881261 (skic8)
Messenger RNA biogenesis [BR:cve03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     137881261 (skic8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_NWD2_C eIF2A WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_SPT8 Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF4 NBCH_WD40 PROPPIN Beta-prop_NUP159_NUP214 Cytochrom_D1 WD40_like Beta-prop_WDR75_2nd WDR54 Beta-prop_VPS8 WD_LRWD1 Beta-prop_IFT122_2nd Vgb_lyase GSDH DUF2415 Nucleoporin_N
Other DBs
NCBI-GeneID: 137881261
NCBI-ProteinID: XP_068579222
LinkDB
Position
Unknown
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTAAWGKSESDGSETIITGSLDDMVKVWKWSDEKLELQWTL
EGHQLGVVSVDISHNGAIAASSSLDAHIRVWDLDSGKQIKSMDAGPVDAWSVAFSPDSKH
IATGSHHGKVNIFGVDSGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAATLSGHGSWVLNVAF
SPDNTHFVSSSSDKSVKVWDAGSRACINTFFDHQDQVWSVKYNSKGSKIISAGDDRSIHI
YDCPM
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagcactcaatacagcattctcttcaagcaagaacacgcacacgacgatgctatctgg
acggcagcgtggggtaaaagtgagtcggatgggtcggaaaccatcatcaccggctcacta
gatgatatggtgaaagtctggaaatggtcggatgagaagctggagctgcagtggactctg
gagggccaccagctgggtgtggtgtcagtggacatcagtcacaacggagccatcgccgcc
tccagctccctcgacgctcacatccgtgtctgggacctcgactctggaaaacagatcaag
tccatggacgccgggccagttgacgcttggtcggtcgctttctccccagactccaaacac
attgccacaggaagccaccacggcaaggtcaacatcttcggcgtggacagcggcaagaag
gaatattctctggacactcgagggaaattcatcttgagcatagcttacagccctgatgga
aaatatttggccagcggagccatcgatggaatcatcaacatcttcgacatcgccactgga
aagctgctccacacactggaaggtcacgccatgcccatcagatcgctcactttctccccc
gactcccagctcctggtcacagcctccgacgacggctacatcaaaatatatgacgtgcaa
catgccaacctggccgccacactgagcggacacggatcgtgggttcttaatgtggctttc
tctccagataacacccacttcgtctcgagctcgtctgacaagagtgtgaaggtttgggac
gccggctccagagcgtgtatcaacaccttcttcgaccatcaagaccaggtgtggagtgta
aagtacaacagcaaaggctcaaagatcatctcggccggagacgaccgctccatccacatc
tacgactgtcccatgtga

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