Cebidichthys violaceus (monkeyface prickleback): 137881450
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Entry
137881450 CDS
T10484
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cve03036
]
137881450 (tdrd12)
Enzymes [BR:
cve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
137881450 (tdrd12)
Chromosome and associated proteins [BR:
cve03036
]
Eukaryotic type
Gene silencing
piRNA pathway
137881450 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
137881450
NCBI-ProteinID:
XP_068579504
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MLNISIMKVESPSRLWGRVVRGPGGDPEPTDQYDRLLAQMNLFYRVETQDPLKLKPTSLE
EGQVCVVYCSVMKSWCRAVVESIAVDSVSCRARCLLVDHGGRLVVPSDQIRVATQTFLQL
PFWMRRFHLAGIKPTTLRVSVYEEKARLIPSSQWDSSATLYLHNLLRASTRTEAVLLESE
SDCTAVELYLTVGNVKICVNDDLVAKKFAYYGGGLDEVDQRPVMLSSSILTQSSTANKPT
AQTSQPAPALSSSLDSAVGTISSPVNTHNPSLLTSLLLRRPQHEPKTSEEEDAAAAAESD
SSLAAALTNDLSLFRFLKFLNPGSSYQQAAPSVSQHEELQDGGPEETTAASSSCSGQEVY
AELLLSSLVVQMSSRSEESGPAEKTWSSEEDWACSRLLEWLNPEPLNPDPDAAGDAAAPS
DPRRTGILVHSALPVEPCSSLDDAPITDALRRVMKKQYGALSAADRYSWPSVSRGCNTVV
VSHDADRPLGYLAPLLTHVLLNSVFASLTSRTGPVVVLLCPGWEKVQAVYDLLEEMKVAS
VLHPVILLLGTGKDEAKAVRIPKNCLLLVTTPFSLVRLLSCHCFLLLRVYHLVLDEADRL
FTLAPDQMATILQHFQKVTSSEENASCPQQLVAVAKRWTGHMEGLVANHMPFPCIVVTVP
EEAALYGDVQQITLMTLESSKVSVLLGALDFNPDVGQKTLIVANSAQEVEDVFQAVSSRS
AFCLKTHEGLTHQLDFVIQQWRKDIRPGTHVILVTSTECLKCLGVRDASCVVHYGFPTSP
KLFGGRLSFMAENFRNLSERVSPEDQTRSLPRPTRSVLLISERNACHVVGVLRYLRRTDA
LLPSELLAFAQGVHVAREDQKTDRPLCSYLKSFGVCRDSSVCPDRHRFIPKLDQSALPSS
GVIEVVPLYIKTASVFYGRVVQEEDGGGVASEMTAYYADRKPGAEEVLEGGFYAVQEDQV
FHRVKVLSVPDRGDRLFFSVLVLFIDVGKEEEVKSHQILQLPERFHSLPGQAVEIVVCRV
KPIDAEADWHPKVTRAINQKIRGLQHRARAVFSLGNTVFVDPMVRVSQVPGMKTVINEYS
VQSEILNTGMGTSNQEHLDLLRALCQEDEEAARISESGDGPASLEVRIKAEVEVLADAVR
AAEVGWPADLPLLEPLNPVSPTIRSPVPAGPELHLSPVCDQKPLLDRRAAVGQRDAHTAD
LKIGDGGELLPKTRQAAHLNPGAVPAGDDQSSIQQDCDDSTKSFHPPARWYQTSDCVIVT
VKLRNPESQRCDFYPDRVVYSCSVNGRTYRADLHLHGLVSAERCRWEMKSGEPVLKLVKR
QQGYWERLLKNRNIFVTYDMEHFEEDEDGTPNGLCFVADTGEDNRYVNSDSGSESD
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacatctccattatgaaggtggagagcccgtctcgcctctggggtcgggttgtt
cggggtcccggcggtgacccggagcccacagaccagtacgacagactgctggctcagatg
aacctcttctaccgcgtcgagactcaggacccgctcaagctgaagcccacgtctctggag
gaggggcaggtgtgtgtggtgtactgttcggtgatgaagtcgtggtgtcgggccgtggtg
gagtccatcgccgtggactcggtgtcctgtcgggctcgctgcctcctggtggaccacgga
gggcggctcgtcgtcccgtcggaccagatccgagtcgcgacgcagaccttcctccagctg
cccttctggatgaggaggttccacctggcgggaatcaaaccaacaaccctgcgggtgtcc
gtctatgaggagaaggcgaggctcatcccgtcctctcagtgggacagctctgctacactc
tacctgcacaacctgctgcgagcgtcgactcggacggaggccgtgttgctcgaatccgag
tcagactgcaccgccgttgagctctacctgaccgtcgggaacgtcaagatctgtgtgaac
gacgatctggtggccaagaagtttgcgtattacggcggcggtctggacgaggtggaccaa
cgtcccgtcatgttgtcctccagcatcttgacccaaagctcgaccgcaaacaagccgacg
gcacaaacgtcccaaccggctcccgctctttcttccagcttggattctgccgtcggaacc
atcagctctccggttaatacccacaatccttcacttctgacctctctgctgctccggaga
ccacaacacgagccgaagacctctgaggaagaagacgctgctgctgctgcagagagtgac
tcgtctctggctgcggctctgaccaacgacctcagtctgttcaggttcctgaagtttctg
aatcctggcagcagctaccagcaggcggctccctctgtgagccagcatgaagagctacaa
gacggtggacctgaggagacgaccgcggcctccagcagctgctcaggacaggaagtgtac
gctgagctcttgctctccagtttagttgttcaaatgtcctctagatcggaggaatcggga
cccgcagagaagacgtggagcagcgaagaggactgggcctgttcacgccttttagagtgg
ctgaacccggagcccctgaaccccgatccagacgctgcaggcgacgcggctgctcccagt
gatcccaggaggactgggatcctggtgcactctgccctcccagtggagccctgcagcagc
ctggacgacgcccccatcacggacgctctccgtcgggtgatgaagaagcagtacggcgct
ctgtctgcggccgaccggtacagctggccgtctgtgagccgaggatgcaacaccgtcgtc
gtctcccacgacgccgaccggcccctcggctacctcgccccgctcctcacccacgtcctg
ctcaactccgtcttcgcctccctcacctccagaacggggcccgtagtggtgctgctgtgt
cccggctgggagaaggtccaggcggtgtacgaccttctggaggagatgaaggttgcctcc
gtcctccaccccgtcatcctgctgctgggcaccggcaaagacgaggccaaggccgtcagg
atccccaaaaactgcctgctgttggtgaccactcccttcagtctggtccgtctgctgtcc
tgccactgcttcctgctcctgcgcgtctaccacctggtgctggacgaggccgaccgcctc
ttcactctcgctccggatcagatggcgaccattttgcagcatttccagaaggtgacgtcc
agcgaggagaacgcctcctgtccccagcagctcgtcgccgtggccaaacgatggaccggt
cacatggagggtttggtagccaatcacatgccgttcccgtgcattgtcgtgaccgtcccc
gaggaagccgctctctacggtgacgtccagcagatcaccctcatgactctggagagcagc
aaggtctcggtgctgttgggtgcgttggatttcaaccccgacgtcggccagaagactctg
atcgtagccaactcggctcaggaggttgaagacgtgttccaggccgtgagcagcagatcg
gcgttctgcctcaagacccacgaggggttaactcaccagttagacttcgtcatccagcag
tggaggaaagacatcaggcctggaactcacgtcattctggtgacctccaccgagtgtctg
aagtgtctgggagtcagagacgcctcctgcgtcgtccactacggcttccccacttcaccc
aaactcttcggcggccggctctcctttatggccgagaacttcagaaacctctctgagcga
gtctcccccgaggaccagacgaggagcctccctcgtcccaccaggtcggtgctgctgatc
tctgagaggaacgcctgtcacgtggtcggggttctgcgttacctgaggagaaccgacgcc
ctgctgccctccgagctgctggccttcgctcagggggtccacgtggcccgggaggaccag
aagaccgacaggcctctctgcagctacctcaagagctttggagtctgcagagacagcagt
gtgtgtcccgaccgtcacagattcatccccaaactggaccagtcggcgcttccttcctca
ggagtcatagaggtggtgcctctctacatcaagacggcgtcggtgttctacggccgcgtc
gtccaggaggaggacggaggaggcgtggcgtctgagatgacggcttactacgccgacagg
aaacccggagccgaggaggtgctggagggaggcttctacgccgtgcaggaggaccaggtc
ttccacagggtgaaggtcctgtccgtcccagacagaggcgaccggctgttcttcagcgtc
ttggttctctttattgacgtggggaaggaggaggaggtgaaatcccatcagatcctccag
ctcccggagcgcttccactctctgcccggccaggccgtggagatcgtcgtctgccgggtc
aaacccatcgacgccgaggccgactggcaccctaaggtcaccagagcgatcaaccagaag
atccgaggcctgcagcaccgagccagagcggtgttcagtctgggaaacacggtgtttgtt
gaccccatggtgcgtgtgtcccaggttccaggtatgaagactgtgatcaacgagtacagc
gtgcagtcagagatcctgaacaccgggatgggaaccagcaaccaggagcatctggacctg
ctgagggcgctctgccaggaggacgaggaggcggctcgcatctctgagtcgggggacggg
ccggcgtctctggaggtccggatcaaagccgaggtggaggttctggccgacgccgtcaga
gcggccgaggtcggctggcccgctgaccttcctctcctcgagccgctgaatccggtgtct
ccgacgatccggtctccggtcccggcaggacctgagctccacctgtctccagtgtgtgat
cagaaacccctgctggaccgccgggctgctgtgggacagagagacgcccacacagctgat
ctgaagatcggggatggaggagaacttctcccaaagaccagacaggctgctcacctcaac
cccggagctgttcctgcaggagacgatcaaagcagcattcagcaggactgtgacgactcc
accaaaagtttccaccctccggcccgttggtaccagacgtccgactgcgtcatcgtgacg
gtgaagctgaggaacccggagagccagcgctgtgacttctaccccgacagagtcgtctac
agttgctcagtgaacggtcggacctacagagccgacctccatctccacggtctcgtctct
gctgagcggtgccgctgggagatgaagtccggtgagccggtcctcaaactggtgaaacgg
cagcagggctactgggagagactcctgaagaacaggaatatcttcgtgacctacgacatg
gagcactttgaggaggacgaagacggaaccccgaatggactgtgttttgtcgcggacact
ggagaggacaaccggtatgtgaactcggacagcggcagtgagagcgactga
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