Cebidichthys violaceus (monkeyface prickleback): 137881586
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Entry
137881586 CDS
T10484
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cve03009
]
137881586 (ighmbp2)
03012 Translation factors [BR:
cve03012
]
137881586 (ighmbp2)
Enzymes [BR:
cve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
137881586 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
137881586 (ighmbp2)
Ribosome biogenesis [BR:
cve03009
]
Eukaryotic type
Other ribosome biogenesis factors
137881586 (ighmbp2)
Translation factors [BR:
cve03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
137881586 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
nSTAND3
ResIII
DEAD
AAA_16
NAT10_TcmA_helicase
UvrD-helicase
AAA_22
IstB_IS21
ABC_tran
DnaB_C
nSTAND_NTPase5
SLFN-g3_helicase
PhoH
AAA
NPHP3_N
SRP54
AAA_25
ATPase
AAA_31
Zot
Flavi_DEAD
NTPase_1
Motif
Other DBs
NCBI-GeneID:
137881586
NCBI-ProteinID:
XP_068579685
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MAVEQYVSKTLELLQEEREAEIEETRIWQENISLKDLQSKGVCLLKLQIGSQSTGLYGRT
VIVLEPRKHLGFSSLPSNSFGPGDIVGLYDTGGCTPASQIGTGIVTRVSQASINVAFDDS
KDGLSFDTEALHNLLKLANDVTYKRMKNALNTLNGYSNGPAANLINVLFGDSKPSNQSQP
NDVQFFNSNLDDSQREAVSFTLSQRELAVIHGPPGTGKTTTVVEIILQAVKQGQKVLCCA
ASNVAVDNLVERLAWCKAKVLRLGHPARLLESIQKHSLDAILAQSDNANIIADIRKDIDK
AFIGMKKMREKGERVNFKREIGELRKELKSREATAIAQILKRADVVLSTNTGACGEGPLK
FLPAEHFDWVVIDECAQALESSCWIALLRARKCVLAGDYKQLPPTIKSQRAASKGLSLSL
MERLIQMYGDSVVRMLTVQYRMNSAIMNWASKEMYQGRLTAHSSVERHLLKDLPGVTCVE
ETSTPLLLIDTAGCGLSEMEVTDEQSKGNQGEVDIVELHIKALIGAGVKAKDIAVIAPYN
LQVDLLRQKLSARHPELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVT
RARRHIAVVCDTQTVQSHAFLKSLINHMTEFGEVRTAFEYIQDIVPQNYTRDHKDTKANA
SASSSTSTKQKVKDQPPSRAKPQQKKSTGSSRKENSAGTEKHTKSGMPALTEEEQKKNRC
AEIRAQVESFLKDLSQKELQFPSSFNSHDRLLVHQIAEELGLVHESKGEGKDRCIMVARP
MVSTPAERPTQEEEEEEEEEEEEEEEEEEEETFPNPQREPLCQPPLDLKNLHLERMKREQ
QKREEHAQQKQQQDNIPPAPAQSSKKPKSAKGKNRMKAGACGIAAAAAPDDDFDTLINAV
IKAERVCSFVRCKASVLTLGQLCLFCNRQYCLSHHIPEVHGCGDKAKSHARMRISKEGIL
YAGSGKKDKSMDPNKKAYLQRKLDSKLKDMSSQRKPKNKENDS
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgaacaatatgtgtcaaagacacttgagctcctacaggaggagagggaggca
gaaatagaggagaccaggatatggcaggagaacatctctctcaaggatcttcaaagtaaa
ggagtctgcctgctgaaattgcagataggaagtcagtccacaggcctgtacggccgcaca
gtcatcgtccttgagccaagaaagcatctcggtttctcatctctgccaagcaacagcttt
ggacctggggacatagttggcttgtatgacactggtggatgcaccccagcctcacagatc
ggcacaggaatagtgacgagggtcagccaagcctctataaacgtggccttcgacgattca
aaggatggcctcagctttgatacggaagcgcttcacaacctcttaaagttggcaaatgac
gtcacctacaaacggatgaaaaatgcattgaatacattaaatggatacagcaatggacca
gctgccaatctgataaacgttctttttggagactcaaaaccgtctaatcaatcacagcca
aacgacgttcagttctttaactcgaacctggatgattctcagagagaagctgtgtccttt
acgctgtctcagagagaactggctgtgattcatggaccaccaggcactgggaaaaccacc
acagtggtggagatcatcctgcaagcggtaaaacaaggccaaaaggtcctctgctgtgcg
gcctctaacgtggccgtggataatttagtggagaggttggcctggtgcaaggcaaaggtg
ctcaggctgggtcaccctgccagactcctggagtccatacagaaacattctctagacgcc
atcctcgcacagagcgacaacgcaaacatcatcgctgacatccgtaaagacatcgataaa
gcatttattggaatgaagaaaatgcgtgaaaaaggagagcgggtgaacttcaaaagagaa
ataggggagcttagaaaagagctcaaatcaagggaagcaacagccatagcccagatccta
aaaagggctgatgttgtgttatcaaccaacacaggtgcttgtggcgaaggccctctgaag
ttcctgccagcggagcattttgattgggtggtgatagacgagtgcgctcaggcgctggag
agcagctgctggatcgccctgctcagagcacgcaagtgcgttctggctggagactacaag
cagctaccacctactatcaaatcacaaagggctgcatcaaaaggcctgtctctcagtctc
atggagagacttatccagatgtacggggactcggtggtccgtatgctaacagttcagtac
cgcatgaacagtgccatcatgaactgggcctccaaagagatgtaccagggaagactaacg
gctcacagctctgtagagagacacttgttaaaagatttaccaggagtcacctgtgttgaa
gagaccagcacgccacttcttcttatcgacactgcaggctgcggtctgagtgagatggag
gtcacagatgagcagtccaaaggcaatcagggtgaagtagacattgttgagctgcacata
aaggccttgattggagctggggttaaagctaaagacattgctgttattgctccgtacaat
ctacaagtcgatcttctgcgtcagaaactttctgcgaggcatccagagctggagataaag
tccgtggatggatttcagggccgggagaaggaggcggtggtgttgtcgctagttcggtcc
aacagaaagggggaagttggatttctggcagaggacagaaggattaatgtggctgttaca
cgtgcaagacgtcacatcgctgttgtgtgcgacacccagacggtccagagtcatgctttc
ctgaagtccctgatcaatcatatgactgagtttggcgaggtcagaacagcatttgagtac
atccaggacatcgtgccacagaactacacccgtgaccacaaagacacaaaggctaatgcg
tctgccagcagctccacgtccaccaaacagaaggttaaagatcagcctccgagcagggcg
aagccacaacaaaagaagtccactggtagcagccgtaaagaaaattctgctggtaccgag
aagcacacaaagtccggcatgccggcactgacggaggaggagcagaagaagaacaggtgt
gctgagatcagagcgcaggtggagagctttctaaaggacttaagtcagaaagaactacag
ttcccatcatcgtttaactctcatgaccgcctgctggtccaccagatcgctgaggagctg
ggcctcgtgcatgagagtaaaggtgagggtaaagaccgctgtatcatggtcgccagacca
atggtgtcaacaccagctgagaggccaacacaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaaacattccctaatccccaaagagagcct
ctgtgtcaacctccattagacctgaaaaatttacatttagagcggatgaagagggagcag
cagaagagggaagaacatgctcaacaaaaacagcaacaggacaacatcccaccagctccg
gcccagtcatcaaagaagcccaagtctgctaaaggaaagaaccgaatgaaggccggcgcc
tgcggcattgctgctgctgcagctccagatgatgactttgacacactcatcaacgctgtc
ataaaggctgaacgtgtgtgcagctttgtcaggtgtaaagcttctgttctgacactcgga
cagctctgcctgttctgcaacaggcagtattgtctcagtcatcatataccagaggttcac
ggctgtggagataaagccaagtctcatgctcggatgagaataagcaaagaaggcattctg
tacgcagggagtgggaagaaagacaaatccatggaccccaataagaaagcctatctgcaa
aggaagctggactctaaattgaaagatatgtcatcccagaggaaaccaaaaaacaaggag
aatgacagttaa
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