Cebidichthys violaceus (monkeyface prickleback): 137882356
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Entry
137882356 CDS
T10484
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve00100
Steroid biosynthesis
cve01100
Metabolic pathways
Module
cve_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
137882356 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cve01006
]
137882356 (fdft1)
Enzymes [BR:
cve01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
137882356 (fdft1)
Prenyltransferases [BR:
cve01006
]
Terpene biosynthesis
Squalene/phytoene synthase
137882356 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
TM1266-like
GST_C_8
Motif
Other DBs
NCBI-GeneID:
137882356
NCBI-ProteinID:
XP_068580731
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MAGACCKCPVSLSLFKRSLSVAPRGCGSAPRSLLLGWRLGERGLQEAARPSSALRPAGFY
RHTGFLCLSHQESMSESLRTCYLYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTV
EDDMTIPLDKKVPMLNDFHTYLYQDEWRFTESQEKDRQVLADFPTISLEFRNLAQEYRDV
ISEICHKMGVGMAEFLEKKVGSMKEWDQYCHYVAGLVGIGLSQLFSASQLEDPEVGRDTE
LANSMGLFLQKTNIIRDYLEDITEGRAFWPQEAWSQFAGRLEDLAQPEKLESALSCLNLL
VTDALRHVPDVIAYLSRLRNQSVFNFCAIPQVMAIATLSSCYNNPMVFQGVVKIRKGQAV
TLMMEATNMSAVQTIISQYSQEIVQKVSHTDPSRDKTLHILSLIEEKSALSQSSLPSKTH
HLSPMYLSAAMLLAALSWQYLSTTAAQAQGTGDMQGQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcttgctgcaagtgtccggtctcgctgtccttgttcaagcgctctctctcg
gttgcaccacggggctgcgggtccgctcctcggtcgctcctgctgggctggaggctaggt
gagcggggcctgcaggaggccgcccgaccctccagcgccctccgacccgcaggcttttac
cgacacacgggcttcctctgtctctcccaccaggagtccatgagtgagagtctgcggacc
tgctacctgtacctgaaccaaaccagccggagttttgcagctgtgatccaagcgctggac
ggggagttgagacatgcggtctgtattttctacctggtgctgcgagcgctggacacagtg
gaggacgacatgaccatccctctggacaagaaggttcccatgctgaatgacttccacacc
tacctgtaccaggacgagtggcgcttcaccgagagccaggagaaagaccggcaggttctg
gctgactttcccacgatatcactggaattcagaaacctcgctcaggagtacagagacgtc
atctctgagatctgccacaagatgggagtgggaatggccgaattcctggaaaagaaagtg
ggatccatgaaggagtgggaccagtattgccattacgtggcggggctggtcggtatcggt
ctgtctcagctgttctctgcgtcccagctggaggaccccgaggtggggcgcgacaccgag
ctggccaactccatgggcctgttcctccagaagaccaacatcatccgagactatctggag
gacataacggagggacgggccttctggccacaagaggcttggagtcagttcgcaggtcgc
ctggaggacttggcccagccggagaagctggagtcggctctgtcctgtctcaacctgctg
gtcactgatgcgctgcgacacgttccggacgtcatcgcctacctgtcccgcctgcgcaac
cagagcgtcttcaacttctgcgccattccacaggtgatggcgatagcgacgctgtcgtcg
tgctacaacaaccccatggtgttccagggagtggtgaagatcaggaagggacaggcggtc
accctcatgatggaagccaccaacatgagcgccgtgcagaccatcatctcccagtacagc
caggagattgtacagaaggtgtcccacacggatccgtcgcgggacaaaaccctgcacatc
ctgtctctaatcgaagagaagtccgccctgtcgcagtccagcctcccctccaagacccac
cacctgtcgcccatgtacctgtccgccgccatgctgctcgccgccctcagctggcagtac
ctcagcaccactgcagcgcaggcgcagggcacaggcgacatgcagggacagtga
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