Cebidichthys violaceus (monkeyface prickleback): 137884058
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Entry
137884058 CDS
T10484
Symbol
casc3
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3
KO
K14323
protein CASC3
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03013
Nucleocytoplasmic transport
cve03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
cve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137884058 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137884058
NCBI-ProteinID:
XP_068581818
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Position
Unknown
AA seq
830 aa
AA seq
DB search
MADRRRRRRRASQDSEDESGSGSGSGSDSGRSGSPTTKSRVKDPPDPPEVTATRVEPKVA
AESECESEDGVGEAVLSDYDSADPEENGSHSEGAEEEEEAEQYSDEEAPPAASELKPPAA
DGPAKVEEEEEEEKEEEVVEEEEEEEEEEEVVVVVEDEGAKETGEEEEEGGGSKEESKAE
EKGNLEGERQSGDGQESTDDPETKGGDKPGQKLDDDEDRKNPAYIPRKGLFFEHDVRGHA
QEEERPKGRNRKLWKDEGRWEHDRFREEEQAPKSREELVAIYGYDIRNNGGGSAERPFRQ
RRPRQSLSPSRDKRWRDGGGERPVRSWQSGGGGGGGGGLNRGGGGAPPSSIHPSSTSPSS
LPLSSVHRNNNNNPSRPPPSRSRPSHHGHMHLPPQYRNSNNNESNAPQMHPRERQGPKAL
SDPSGDRGLVIGDRGGAGGGRGPSVVIEDITVGGVRDQDPRVVTPATSSQPGGYQSASPR
RQQQEQRGGADRSASGLAASSSDSSSLQSANREASPPAERPAVERKSYSLARRTRSRPAD
LGSKQPSVEESATAGGGNAAASSSSSPSGVGGKSWAGAGDEPSQGGGGGGGGGGGGGGAG
GAAVTELDQDVARLSLAGQSWSPSPTSYFRSEMRGLPSTMHIPSSPPQFPNMEEMSVGSN
RAKRYSSQRQRPVPEPAPPAMHLGVMEGHYYEPMSYQGPIYAHGDGPAPIPPQGMLVQPE
MHLPHPGLHPHQSGGPIANPALYGGPPVSLSPGQPQQLLPPPFYPPPGVMTFPYPTMYPT
PQAQAQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTVKPPPPEMRFASE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgaaggaggaggcgcgcgtctcaggacagcgaggacgagtccggt
tcaggttctggttctggttctgacagcgggagatccgggtctccgaccaccaagagtcgc
gtgaaggatccaccagacccaccggaagtaacggcgacccgggtcgagccgaaagtcgcc
gcggagtccgagtgtgagagtgaagatggagtcggagaagctgtcctctctgactacgac
agcgctgatccagaagaaaacggatcacattcagagggagcggaggaggaagaggaggct
gagcagtacagcgatgaagaagctcctccagcagccagcgagcttaaacctcctgcagcc
gacggcccggcgaaggtagaggaggaggaggaagaggagaaggaggaggaggtggtggaa
gaagaagaagaagaggaggaggaggaggaggtggtagtggtggtggaggatgaaggagcg
aaggagacaggggaggaggaggaggaaggaggaggcagtaaagaggagagcaaagccgaa
gagaaaggaaacctggaaggagagagacagagcggagacggacaggagtccacagacgac
cctgagacgaaggggggggataaacctggtcagaagctcgacgatgacgaggacagaaag
aacccggcttacatcccgaggaagggtttgttctttgagcacgacgtcagaggacacgcc
caggaggaggagagacctaaaggtcgtaacaggaagctgtggaaggacgagggccgctgg
gaacacgaccggttcagagaagaagaacaggcgccgaagagccgcgaggagctcgtcgcc
atctacggctacgacatccggaacaacggcggcggctccgcggagcgaccgttccgacag
cgcagacccagacaaagtttgtctcccagcagagacaaacggtggagagacggaggaggg
gagcgaccggtccggtcctggcagagtggaggaggaggaggaggaggaggaggtctgaac
agaggaggaggaggagctcctccatcatcaatccacccgtcctccacctccccctcctcc
ctcccgctctcctccgttcaccgtaacaacaacaacaacccctccaggccgccgccgtcc
cgcagccgtccatcccaccacggccacatgcacctcccgccccaatacaggaatagtaac
aacaacgaatcaaacgcgccccagatgcaccccagagaacgacagggccccaaagctctg
tctgacccctcaggggaccggggcttggtcatcggggaccggggcggggcgggggggggg
aggggcccctctgtggtcatcgaggacattacggtcggaggcgttcgggatcaggacccg
cgtgtcgtaacgccagcgacgtcatcgcaaccgggcggctaccagtcggcgtcgccgaga
cgccagcagcaggaacagaggggcggggccgacaggtccgcgtcaggattggccgcttct
tcctctgactcctcctccctacagtcggccaatcgggaggcctctcctcccgccgagcgg
ccggcggtggagcgtaaatcttactctctggctcgcaggactcgctctcggcccgcggac
ctgggcagcaaacagccgtctgtggaggagtccgccaccgccggaggagggaacgccgcc
gcctcctcctcctcctctcccagcggtgtgggagggaagagctgggcgggagcaggagac
gagccgagtcagggaggaggaggaggaggaggaggaggaggaggaggaggaggagcagga
ggagcagcagtgacggagctggaccaggacgtggctcgactcagtctggcagggcagagc
tggagcccgagtccaacgtcctacttcaggtctgagatgagaggcctccccagcaccatg
cacatccccagcagcccgcctcagttccccaacatggaggagatgagcgtcggctctaat
cgagccaagcgctactcgtcccaacgccagagacccgtcccggagccggcgccgcccgcc
atgcacctcggggtgatggagggacactactacgaacccatgtcgtaccaaggaccaatc
tacgcccacggagatggccccgcccccatcccgccacaaggcatgctggtccagcctgag
atgcacctgccccaccccggtctccatccccaccaatcaggcggcccgattgctaacccc
gccctctacgggggcccgcctgtttctctgtcgccggggcaaccgcagcagctgctgccg
ccgcctttctacccaccgccgggggtcatgaccttcccgtacccgaccatgtacccgact
cctcaggctcaggcccaggtgacctatggaggagtgacgtactacgacaccatgcagcag
caggctcagcccaaaccatcgcccccccgacgtacctcgcagcccgtcaccgtcaagccc
cccccaccggagatgcgcttcgcctcagagtga
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