Cebidichthys violaceus (monkeyface prickleback): 137884328
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Entry
137884328 CDS
T10484
Symbol
smg7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
cve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137884328 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
137884328 (smg7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137884328
NCBI-ProteinID:
XP_068582184
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Position
Unknown
AA seq
1179 aa
AA seq
DB search
MNLIAQYLRQAEALKADMTDSKLGAAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRV
KSSQLGIISNKQNVGGAIVTPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVK
SKWSVSDFIRAFIKFHGHVYLSKSLDKLDVLREKLEEQFQRLILQKAFSSQQLVHITVIN
LFELHHLRDLTADGGEQSYSSEQQVSWFQLLGLFMSFLGVMCSRALLNKNRGEEIMGECP
LPAIKVSLDWLKLRPSVFPEAAVDQRQHVWPWLVSILNSFQPKEDDVSCSSATPLPEEFE
LQGFLALRPALRSLDFTKGHQGVLVDRDGLPVHTRHQRLISLGKWVADNQPGLIQCRVSE
DGLLVFITDIPEQAVEEPQEKEAPVLQESSNAEQLSNDGGKSGLKSVLSAGKSSQSSWPD
GGERPVVTFKENIKPREQSREPTRSHHLKDSGKERRDFAKGNGAAGKGELKRDGKRKSDL
KKAGHEKSADAGKQVKAQMELRKTPVSEAKKSPVTQTQTTCSSQFIPIHHPGAFPPLPSR
PGFPPSAYVIPPPVAFPGLQVNPGFTFSTGVSVPGPFLQPGVHAQAGGQAGKQSHIPYSQ
QRPSGPGPGQGPGSSVPMNQGPSQGQQNQAMQQSVQLQVQAMSQQQQQSPTKPVQQVGMG
KSPPHHPGLQQQYMQVQDQPAQMWNQAQAALQKIPPMQMSMKQPQQQQTFYMAAQDPLKL
YEHQLQPASMEKKIKYPNVKMQDFYWEPTYRMGDGLAVMADRMKRPPPGGICSEQDGSGG
PRGPPFEDNKPLLPPDLLKTLADFEEEEELVFSKPPDFFQALAGPLSSAPGPNIFLPNQT
RMESGPEVVSSLLPISGFPMQEYNQNSIFSQAYGKNLPPSSKPDAPMMHQEPSLYSLFEG
TPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHGAMPFSNFGPIGTPDSRDRRMV
DRWKADKTGAVSGFGLDYLPAAASSAASDNSWHQAGPTGSSWTNQESPMEESSSTVLLDS
LKSIWSSSMMQPGPSALEQLLLQQKQKQQRGHGAMNPPH
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcatcgctcagtacctccgacaggcagaggccctgaaggcggatatgacagat
tcgaagctcggggcggctgaggtgtggacgtcccggcaggctctgcaggatctgtaccag
aagatgctggtgaccgacctggagtacgctctggacaagaaggtggagcaagacctgtgg
aatcacgcttttaagaaccagatcaccaccttgcagagccaggccaagaaccgggccaac
cccaaccgcagcgaggtccaggccaacctgtcgctgttcctggaggcagcgagtggtttc
tacacacagttactgcaggagttgtgcaccgtgttcaacgtggaccttccgtgccgcgtc
aagtcgtctcagctcggcatcatcagcaataagcagaacgtcggcggcgccatcgtcacg
ccgcagcccagctcctgttcctacatctgccagcactgcctcgtccacctcggagacatc
gctcgttatcgtaaccagaccagccaggcggagtcgtactaccgacacgcagcccagctg
gtcccgtccaacggtcagccctataaccagctggccatcctggcctcctctaaaggagac
cacctcaccaccatcttctactactgccgcagcatcgcggtcaagttccctttcccagca
gcctccaccaacctgcagaaggctctgtccaaggctctggagagccgcgatgaggtgaaa
tccaagtggagcgtgtcggatttcatccgggccttcatcaagtttcacggtcacgtctac
ctgagcaagagtctggacaagctggacgtcctgagggagaaactggaggagcagtttcag
aggctgatcctgcagaaggcattcagttctcagcagctggtccacatcaccgtcatcaac
ctgtttgagctccaccacctcagagacctgaccgccgacggtggagaacagagctacagc
agcgagcagcaggtcagctggttccagctgctgggactcttcatgtccttcctgggtgtc
atgtgcagccgtgctctgctcaacaagaaccgaggagaggagatcatgggggagtgtcct
ctgccggccattaaagtatctctggactggctgaagctgagacccagcgtcttccccgag
gccgccgtggaccagaggcagcatgtctggccctggctggtctccatcctcaacagtttc
cagcccaaagaggacgacgtgtcctgttcctcagcgacgccacttccagaggagtttgag
ctgcagggtttcctggcgcttcggcctgctctgaggtccctggacttcactaaaggtcat
cagggcgtcctggtggacagggacggcctgcccgtccacactcgacatcagagactcatc
agtttgggcaaatgggtggccgacaaccagccggggctgatccagtgcagggtgagtgaa
gacggcctcctcgtcttcatcaccgacattccagagcaggcggtcgaggagccccaggag
aaggaggcgccggtgctgcaggagtcgtccaacgccgagcagctgtccaacgacggcggg
aagtccggcctgaagtcggtgctgtcggcggggaagagctcgcagagctcgtggcccgac
ggcggagagcgacccgtcgtcaccttcaaggagaacatcaaaccccgagagcagagccga
gagccgacgcgcagccatcacctgaaggacagcggcaaggagcgccgggacttcgccaag
ggcaacggggctgctgggaaaggagagttgaagagggacgggaagaggaagagcgacctg
aagaaggccggccacgagaaaagtgctgacgctggaaaacaggtgaaggcgcagatggag
ctgaggaagactccggtgtctgaggccaagaagagtcccgtcactcaaactcagaccacc
tgctcctcccagttcatcccaatccatcatcctggagccttccccccactgcccagcaga
cctggtttccccccctcagcctacgtgatccctcccccggtggcgttcccgggtctccag
gtgaacccgggcttcaccttctccaccggagtatccgtccctggtccgttcctccagccg
ggcgtccacgcccaggccggcggccaggccgggaagcagtcccacattccctacagtcag
cagaggccctccggtcccggtccgggtcaggggcccgggtcctcggtccccatgaaccag
ggcccctcccagggtcagcagaaccaggccatgcagcagtcggtccagctgcaggtgcag
gcgatgagtcagcagcaacagcagtctcccaccaaaccggtccagcaggtcgggatgggg
aagagtccacctcaccacccgggtctgcagcagcagtacatgcaggtccaggatcagccg
gctcagatgtggaaccaggctcaggctgctctgcagaagatcccccccatgcagatgtcc
atgaagcagcctcagcagcagcagaccttctacatggcggctcaggatcctctcaaactg
tacgagcaccagctgcagccggccagcatggagaagaagatcaagtaccccaacgtcaag
atgcaggacttctactgggagcccacctacaggatgggggacggtctggccgtgatggcg
gaccgcatgaagaggcctccgccgggtgggatctgctccgagcaggacggctccggtggg
ccccggggccccccctttgaggacaacaagcctcttctacctcccgacctgttaaaaact
ctagcagactttgaggaggaggaggagctcgtcttttctaagcctcctgatttcttccag
gccttggccggccctcttagctctgctcctggaccaaacatatttctgccgaaccagacc
aggatggagagcggccccgaggttgtctcgtctcttctgcccatttctggcttccccatg
caggagtacaaccagaacagcatcttcagtcaggcgtacggcaagaacctgccgcccagc
tccaagcccgacgctcccatgatgcaccaggagccgtccctctactcgctgtttgaaggg
actccctggtccccctccctccctgccagctccgatcactccaccccggccagccaatcc
cctcactcctccaaccccagcagcctgccgtcctcccccccgacacacaaccacggagcc
atgcccttctctaacttcgggcccataggcactccggacagccgggaccgcaggatggtg
gaccgctggaaggctgacaagaccggagcggtcagcgggttcggactggactacctgccg
gctgcagcgtcctccgcagcttcagacaacagctggcaccaggccgggccgaccggcagc
tcctggaccaatcaggagtctcctatggaggagtcgtcctccaccgtgctgctcgacagc
ctcaagtcgatctggtcgagctccatgatgcagccgggcccgtcggctctggagcagctc
ctcctgcagcagaagcagaagcagcagcgaggtcacggcgccatgaacccgcctcactga
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integrated database retrieval system
