Cebidichthys violaceus (monkeyface prickleback): 137884485
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Entry
137884485 CDS
T10484
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04137
Mitophagy - animal
cve04140
Autophagy - animal
cve04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137884485
04137 Mitophagy - animal
137884485
04148 Efferocytosis
137884485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cve03000
]
137884485
Transcription factors [BR:
cve03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
137884485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
137884485
NCBI-ProteinID:
XP_068582368
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MDTGTVPEKKRVSSDRRKEKSRDAARSRRGKESEVFYELAQELPLPHSVSSSLDKASIMR
LIISYLRMRKILSSTDEPMTEEETELESQLNGSYLKALEGFLLVLSEDGDMIYLSENVNK
CLGLAQFDLCGHSVFDYIHPCDQEELREMLVHKTGSKKAKEANTERSFFLRMKCTLTSRG
RTVNVKSATWKVLHCSGHVRVYDTHTEETPNGHQEPPVPYLVLICDPIQHPSNIEVPLDA
KTFLSRHTMDMKFTYCDERITELMGYDPEDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQ
VSTGQYRMLAKRGGFVWVETQATVIYNNKNSQPQCVVCVNFVLSGIQEEKVILSLEQIED
VKPVKEEEQQEEKAVVESSQPDMSQVLLKDEKKGPELDVIKLFTRATEAKPLASLYEQLK
AEPEALTLLAPAAGDAIISLDFSCPDSEIQLLKEVPLYNDVMLPSTSDKLALPLGEPLRV
ATTSSEDAKAKSFAPARSTTTSSHSASEADSPLDFCYPMDSEMSSDFKLDLVEKLFAIDT
EPKTPFTTQAMEDLDLEMLAPYIPMDDDYQLRSLTLEESPACGPVQSSPVHVTQDIHSYP
SSPFSAPGSRTASPAPLAAPHPATIVAKRTPQLDKEVSLQTLAAQNSQRKRKLGDIKGII
GQETLLQDKKLKASKAATTRTILLLPSDLASRLLGSTSECTGSLFTLPQLTRYDCEVNAP
LQGRQSLLQGEELLCALDHVNTI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggacacaggaactgtaccagaaaagaaaagggtgagctcggatcgcaggaaggagaag
tcgagggatgcggcgcgatcccggcgtgggaaggagtcggaggtgttctacgagttggcg
caggagctgcccctgccccacagcgtcagctccagcctggacaaggcctcgataatgagg
ctcatcatcagctacctgcgcatgagaaagattctcagcagcactgatgagccgatgacc
gaggaggaaacggagcttgaatcgcagctgaacggctcctacctaaaggctctggagggc
ttcctcttggtcctgtcggaagacggagatatgatctatctctccgagaatgtcaacaag
tgcctcgggctggcgcagtttgacctgtgtggacacagtgtgtttgactacatacatcca
tgtgaccaggaggagctgagggagatgctggtccacaaaacaggctccaaaaaggccaag
gaagcgaacaccgagcgcagcttcttcctccgaatgaaatgcacgctcaccagcaggggg
cgcacggtcaacgtcaaatcagctacgtggaaggtgctccactgctccggtcacgtccgt
gtatacgacacccacaccgaggagactcccaacgggcaccaggagccacctgtcccctac
ctggttctgatctgcgaccccatccaacacccctccaacatcgaggtccctctcgacgcc
aagactttcctcagccgccacacgatggacatgaagttcacgtattgtgacgaaaggatc
actgagctcatgggttatgatccagaagacctgttgaatcgttctgtgtatgagtactat
catgctctggactcagaccatcttaccaagactcaccacaacttgtttgcaaagggccaa
gtcagcaccggccagtaccggatgttggccaagagaggcggctttgtgtgggtggagacc
caagccactgtcatctacaacaacaagaactcccagccacagtgtgttgtctgtgtcaac
tttgtgctcagtggcatccaggaggagaaagtgatattgtccctggagcagatcgaggat
gtgaagccagtgaaggaggaggagcagcaggaagagaaggccgtggttgagagcagccag
cccgacatgtctcaggtcctgctgaaggatgagaagaagggcccggagctggatgtgatc
aaactgttcactcgggcaacagaggccaagcctctggcgagcctgtatgagcagctgaag
gcggagccagaggccctcaccctgcttgccccagctgctggagacgccatcatctccctg
gacttcagctgccctgattcagagatacagctgctgaaggaggtccctctatacaatgat
gtaatgcttccctccaccagcgacaagctggctctgcctctcggcgagcctctccgtgtc
gccaccaccagctccgaggacgccaaagctaagagcttcgctccagcccggtccaccacc
acgagcagccacagcgcctcagaggccgacagtccgctggacttctgttatcccatggac
tcggagatgagctcggatttcaaactagacttggtggagaagctgtttgccattgataca
gagcccaagacccccttcaccacacaggcaatggaagacttggatctggagatgttagct
ccctacatccccatggatgacgactaccagctgcgcagtctgaccctagaagagtctcca
gcttgtggaccggttcagagttctccggtccacgtgacgcaggacattcacagctatccc
agctccccattcagtgcaccgggtagtcgcacggcttccccggcgccgcttgccgcccct
catcctgccaccatcgttgctaagaggaccccacagctggacaaagaagtctcgctccag
accctggcagctcagaattcacagcgcaaaagaaagctgggtgacataaaagggattatc
ggacaagaaactttgctgcaggacaaaaagctgaaggcctcgaaggcagcaacaaccagg
accatacttctgctgccttcagatctggcgagtcgtctgctgggaagcacgtccgagtgc
accggttcccttttcacgctgccgcagctcacccgctacgactgcgaggtcaacgccccc
ctgcagggccgccagtccctgcttcagggggaggagctgctgtgcgctctggaccacgtc
aatacaatctag
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