Cebidichthys violaceus (monkeyface prickleback): 137884554
Help
Entry
137884554 CDS
T10484
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137884554 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cve03021
]
137884554 (polr1b)
Enzymes [BR:
cve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137884554 (polr1b)
Transcription machinery [BR:
cve03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
137884554 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
137884554
NCBI-ProteinID:
XP_068582486
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MDSSLKWDNLPKAPSLKNLTESRFGVLNESQHAAVQDLTKAHIESFDQAVTDGLSRVVQA
IPPLEFTVNKDDRFSLAFVEATVYNPVVTKGSICRELKVFPAECRGRKCTYKGKMVADVS
WSINGVPKGIIKQSMGQVPIMVKSKLCNLHGMSPKELVEHHEEAEEMGGYFIVNGNEKVI
RMLIMPRRNYPIAISRPKWKSRGQGYTQHGISMRCVKEEHTAVNMNLHYLDNGTVMLNFI
YHKELFFLPLGFALKALVDFTDFQIYQELIKGREEKSFYKSCVSEMLRVVMEEGCTTRSK
VLNYLGERFRVKMSLPEWYTNEQCANFLLDECICIHLKSDTEKFYLLCLMTRKLFTYAKQ
ECMEENPDSIMCQEVLTPGQLYLMFMKERMSAWLLSVKLSFDKRGSRLKGGWSPENVMKM
FNMSMDLTKPFEYLLATGNLTSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFA
KMRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAICEIVASTLSTASLPALLCSLGV
TPVDGSPGRAFSDCYPVILDGAVVGWVETELAQVVVDSLRRFKVLKEKRIPPWTEIVLVP
KTGKASLYPGLFLFTTPCRMVRPVRNLALGKQELIGTFEQLYINVGIMEDEIEPGVTTHQ
ELFPHSMLSVVASFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQS
PLVRPCMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELV
DLADKVRGDDSVVFGTKPGDPKVQEKLDADGLPFIGSTLQYGDPFYSYINLNTGQGTVHF
YKSQEACVVDNVKICSNDTGSGRFKRVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMAPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEESSALE
YFGKMLRAGGYNYYGTERLYSGVSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPVGGRNIQGGIRFGEMERDALLAHGASYLLHDRLFNCSDRSVTQVCVDCGSLLSPL
LEKPPPYWSALRHRETVCSLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggactcctcactaaagtgggataatctgcccaaagctccgagtctaaagaatctgaca
gagagcagatttggcgtcctgaatgagtctcaacacgccgccgttcaggacttgacgaaa
gctcacatcgagtcgtttgaccaggctgtcaccgacgggctcagccgcgttgtgcaggcc
atccctcccttggagttcacagtgaacaaagatgacaggttcagcctcgcgttcgtcgag
gccacagtctacaacccggtggtcaccaaagggagcatctgcagggagctgaaggtgttt
cctgcagagtgcagggggagaaaatgtacatacaaagggaagatggtggcagatgtcagc
tggtcaatcaacggagtccccaaaggcatcataaaacagtccatgggtcaggtgcccatc
atggtgaagtccaagttgtgtaacctgcatggcatgtcccccaaagagcttgtagaacac
catgaagaggcagaggaaatgggaggctatttcattgtgaatggaaatgagaaggttatc
cgtatgttgatcatgccaaggaggaactatcccattgccatttcgaggccaaagtggaag
agcaggggccagggatacactcagcatggtatttccatgcgctgcgtaaaggaagagcac
acagccgttaacatgaatctacattatttggataacgggactgtgatgctgaacttcatc
taccacaaagagctgttcttcctcccactcggctttgcgcttaaggccctggtggacttc
acagattttcaaatctatcaggaactgatcaagggccgcgaggaaaagtccttctataaa
agctgtgtgtccgagatgctgcgcgttgtcatggaggagggctgcaccacccgcagcaag
gtgctgaattacctcggagagcgcttcagggttaagatgagccttcctgagtggtacacc
aacgagcagtgcgccaacttcctgctagatgagtgcatctgtatccacttgaagtcagac
acggagaagttctacctactgtgtctgatgaccaggaaacttttcacgtacgccaagcag
gagtgtatggaggaaaaccccgacagcatcatgtgtcaggaagtgctcactcctggtcaa
ctctatctcatgtttatgaaggagagaatgtcggcctggttgctgtctgtgaagctgtcc
tttgacaagagaggcagcagactgaaaggaggatggagccctgagaacgtgatgaagatg
ttcaacatgagcatggatctcaccaaaccctttgaatatctgctggccacagggaacctc
acctccaagacaggccttggcatgctgcagaacacaggcctgtgtgttgtagccgacaag
ctcaacttcatccgctacctgtcccacttccgctgtgtgcacagaggtgcggcgttcgcc
aagatgaggaccacttctgttcgtaagctgctgcccgagtcctggggcttcctgtgtccc
gtccacactccagatggagagccgtgtggactcatgaaccacatgacggccatctgtgag
attgtggcatcgactttgtccaccgcatccctgcctgctctgctctgttccctcggtgtc
actccagtggatggatctcctggccgagcgttttccgactgctaccccgtgatcctggac
ggggctgttgtgggctgggtggagactgaattagcccaagttgtggtcgactccctgcgt
aggttcaaggtgctgaaagagaagaggatccctccctggaccgagattgttctggttcct
aaaacgggcaaggccagcttgtacccaggcctgttcctcttcacaacaccctgccgtatg
gtgcggcccgtacgcaacctagctcttggcaagcaagagttgattggcacctttgaacaa
ctgtacatcaatgtgggcatcatggaggacgagatcgagcctggagtgaccacgcatcag
gagctcttccctcacagtatgctcagcgtggtggccagcttcatcccctattcggaccac
aaccagagtcctaggaacatgtaccagtgtcagatgggtaagcagactatgggcttcccc
ctgcactcattcatggaccgctcggataacaagctgtaccggctccagaccccacagagc
ccactggtcaggccctgcatgtacgaccactacaacctggacaactaccccagcggcacc
aacgccatcgtggccgttatatcctacacaggctacgacatggaagatgccatgattgtg
aacaagtcatcatgggagagaggctttgcccatggaagtatctacaagactgagctggtg
gacctggcagacaaagtgaggggagatgacagcgtcgtgtttgggaccaagccaggtgac
cctaaagtacaggagaaactggacgctgatggacttccattcatcggatcgacccttcag
tatggagaccccttctacagctacatcaacctcaacacgggccagggcactgtccacttc
tacaagagccaagaggcctgcgttgtggacaatgtaaagatctgcagcaacgacactggc
tcaggccgctttaaacgcgtctgcatcaccatgcgagtgccgcgaaaccccaccatcgga
gacaagttcgccagtcgccacggtcagaagggcatcctgagtcgcctgtggccggccgag
gacatgcccttcacagagagcggcatggcccccgacatcctgttcaacccccacggcttc
ccctcccgcatgaccatcgggatgctgatcgagagcatggccggcaagtccggcgccctg
cacggcctgagccacgacgccacccccttcaccttctcagaggagagctccgcgctcgag
tacttcggcaaaatgctccgggcgggtggctacaactactacggcacggagcggctctac
agcggagtgagcggccaggagctggaggccgacatcttcatcggggtcgtctactaccag
cggctgcgtcacatggtctccgacaagttccaggtgagaaccaccggagcaagagacaag
gtgaccaaccagccagtgggggggaggaacattcagggaggcatccgtttcggggagatg
gagcgagacgccctgctggcccacggcgcgtcttacctgcttcacgatcgcctcttcaac
tgctcggaccgatcggtgactcaggtgtgcgtcgactgcggcagcctgctgtcccccctg
ttggagaaaccgccgccctactggtcggccctgcgccaccgtgaaaccgtctgctcactg
tgcggcaaaagtgactccattgactcggtgtccgtcccttacgtcttccgctactttgtg
gccgaactggcggcaatgaacatcaaagtcaaattagatgtgaagtga
DBGET
integrated database retrieval system
